==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 19-SEP-12 2LYR . COMPND 2 MOLECULE: CYLR2; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; . AUTHOR M.JAREMKO,L.JAREMKO,H.KIM,M.CHO,C.D.SCHWIETERS,K.GILLER,S.BE . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4813.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 13.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 42.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 128 0, 0.0 63,-0.1 0, 0.0 65,-0.1 0.000 360.0 360.0 360.0 68.5 5.1 12.4 2.2 2 2 A I + 0 0 155 62,-0.2 3,-0.1 63,-0.2 64,-0.1 0.898 360.0 35.3 -65.2 -41.4 5.5 13.1 -1.5 3 3 A I S S+ 0 0 81 1,-0.1 3,-0.1 61,-0.1 57,-0.1 0.112 75.7 85.0 -93.9-154.5 7.2 9.8 -2.2 4 4 A N + 0 0 4 1,-0.2 2,-3.7 56,-0.1 3,-0.5 0.865 51.1 177.3 58.7 39.4 6.5 6.4 -0.7 5 5 A N >> + 0 0 65 1,-0.2 4,-1.0 2,-0.1 3,-1.0 -0.148 22.2 146.7 -70.5 53.8 3.8 5.9 -3.2 6 6 A L H >> + 0 0 1 -2,-3.7 4,-1.5 1,-0.3 3,-0.9 0.884 63.6 66.7 -58.3 -38.1 3.3 2.4 -1.7 7 7 A K H 3> S+ 0 0 81 -3,-0.5 4,-0.7 1,-0.3 3,-0.3 0.893 100.3 49.8 -48.9 -43.7 -0.4 2.8 -2.4 8 8 A L H <> S+ 0 0 67 -3,-1.0 4,-1.5 1,-0.2 3,-0.3 0.777 101.8 62.3 -65.4 -34.8 0.6 2.7 -6.1 9 9 A I H S+ 0 0 12 -4,-1.5 5,-2.7 -3,-0.3 -1,-0.2 0.902 105.2 43.1 -50.7 -45.1 -0.2 -2.6 -4.7 11 11 A E H ><5S+ 0 0 127 -4,-0.7 3,-1.5 -3,-0.3 -1,-0.3 0.916 116.1 48.9 -66.2 -42.0 -1.8 -2.2 -8.1 12 12 A K H 3<5S+ 0 0 130 -4,-1.5 -2,-0.2 1,-0.3 -1,-0.2 0.894 108.0 53.5 -63.7 -40.7 1.6 -2.8 -9.7 13 13 A K T 3<5S- 0 0 62 -4,-4.4 -1,-0.3 2,-0.1 -2,-0.2 0.102 113.3-123.0 -84.9 25.7 2.1 -5.8 -7.5 14 14 A K T < 5 + 0 0 172 -3,-1.5 2,-0.5 -5,-0.2 -3,-0.2 0.753 66.0 137.9 36.4 42.4 -1.3 -7.1 -8.8 15 15 A I < - 0 0 22 -5,-2.7 -1,-0.2 -6,-0.2 -2,-0.1 -0.962 49.3-130.3-120.3 123.5 -2.7 -7.3 -5.2 16 16 A S > - 0 0 56 -2,-0.5 4,-1.7 1,-0.1 3,-0.5 -0.328 15.8-122.6 -70.4 154.5 -6.2 -6.2 -4.5 17 17 A Q H > S+ 0 0 81 1,-0.3 4,-3.0 2,-0.2 5,-0.2 0.909 116.5 57.3 -61.4 -39.1 -7.2 -3.8 -1.7 18 18 A S H > S+ 0 0 66 2,-0.2 4,-3.8 1,-0.2 -1,-0.3 0.832 100.3 57.7 -59.8 -33.4 -9.5 -6.5 -0.5 19 19 A E H > S+ 0 0 50 -3,-0.5 4,-0.8 2,-0.2 -1,-0.2 0.948 109.2 43.7 -65.2 -44.8 -6.5 -8.9 -0.3 20 20 A L H >< S+ 0 0 2 -4,-1.7 3,-0.8 1,-0.2 4,-0.5 0.931 118.3 45.3 -63.2 -43.1 -4.8 -6.5 2.1 21 21 A A H >X S+ 0 0 0 -4,-3.0 4,-4.4 1,-0.2 3,-2.1 0.870 100.5 68.3 -66.1 -37.3 -8.1 -6.1 3.9 22 22 A A H 3< S+ 0 0 48 -4,-3.8 -1,-0.2 1,-0.3 -2,-0.2 0.759 90.2 65.4 -56.0 -23.3 -8.6 -9.9 3.8 23 23 A L T << S+ 0 0 78 -4,-0.8 -1,-0.3 -3,-0.8 -2,-0.2 0.871 121.8 17.3 -63.3 -39.6 -5.7 -10.0 6.1 24 24 A L T <4 S- 0 0 43 -3,-2.1 -2,-0.3 -4,-0.5 -1,-0.2 0.638 86.4-154.0-102.4 -28.5 -7.9 -8.2 8.7 25 25 A E < + 0 0 148 -4,-4.4 2,-0.2 -7,-0.2 -3,-0.2 0.905 54.6 118.4 43.4 56.5 -11.3 -8.8 7.2 26 26 A V S > S- 0 0 70 -5,-0.4 3,-2.9 0, 0.0 4,-0.2 -0.797 90.5 -70.3-135.3 177.6 -12.7 -5.7 8.9 27 27 A S T >> S+ 0 0 86 1,-0.3 4,-2.2 -2,-0.2 3,-1.9 0.671 110.1 96.5 -46.4 -14.8 -14.2 -2.3 7.9 28 28 A R H 3> + 0 0 60 1,-0.3 4,-3.5 2,-0.2 -1,-0.3 0.825 69.3 69.1 -43.2 -36.5 -10.6 -1.8 6.7 29 29 A Q H <4 S+ 0 0 117 -3,-2.9 -1,-0.3 1,-0.2 4,-0.2 0.917 109.8 31.9 -53.1 -45.1 -12.0 -2.8 3.4 30 30 A T H X4 S+ 0 0 107 -3,-1.9 3,-1.5 -4,-0.2 4,-0.5 0.937 122.6 45.5 -76.9 -51.7 -14.0 0.5 3.3 31 31 A I H >X S+ 0 0 64 -4,-2.2 4,-2.6 1,-0.3 3,-0.8 0.773 94.4 77.7 -70.7 -19.3 -11.6 2.8 5.2 32 32 A N H 3X S+ 0 0 15 -4,-3.5 4,-1.4 -5,-0.4 -1,-0.3 0.810 88.3 63.1 -56.0 -27.3 -8.7 1.5 3.2 33 33 A G H <> S+ 0 0 31 -3,-1.5 4,-0.9 -4,-0.2 -1,-0.3 0.934 110.5 33.6 -62.4 -46.7 -10.1 3.8 0.6 34 34 A I H <>>S+ 0 0 76 -3,-0.8 4,-4.1 -4,-0.5 5,-0.8 0.766 108.0 67.5 -82.6 -27.4 -9.5 6.9 2.7 35 35 A E H X5S+ 0 0 16 -4,-2.6 4,-1.8 1,-0.2 -2,-0.2 0.957 111.2 33.3 -62.0 -46.8 -6.3 5.7 4.5 36 36 A K H <5S+ 0 0 31 -4,-1.4 -1,-0.2 -5,-0.2 -2,-0.2 0.778 124.4 47.3 -75.1 -31.4 -4.3 5.8 1.3 37 37 A N H <5S+ 0 0 124 -4,-0.9 -2,-0.2 -5,-0.3 -3,-0.2 0.944 124.4 28.2 -74.4 -53.2 -6.2 8.8 -0.0 38 38 A K H <5S+ 0 0 127 -4,-4.1 2,-0.2 -5,-0.1 -3,-0.2 0.895 134.9 11.4 -73.0 -45.9 -6.2 10.9 3.0 39 39 A Y S < - 0 0 34 1,-0.1 4,-3.4 -3,-0.1 5,-0.1 -0.388 22.7-143.4 -64.8 133.0 -1.1 3.2 7.5 43 43 A L H > S+ 0 0 83 2,-0.3 4,-2.2 1,-0.2 5,-0.3 0.880 101.6 55.7 -62.4 -41.3 2.0 1.8 9.2 44 44 A Q H > S+ 0 0 162 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.964 117.9 36.2 -57.6 -46.7 -0.0 -0.3 11.6 45 45 A L H > S+ 0 0 16 1,-0.2 4,-2.5 2,-0.2 5,-0.3 0.877 111.0 66.6 -64.7 -44.1 -1.6 -1.8 8.5 46 46 A A H X S+ 0 0 0 -4,-3.4 4,-2.6 1,-0.2 7,-0.2 0.895 100.2 44.3 -51.1 -54.3 1.7 -1.6 6.5 47 47 A L H X S+ 0 0 105 -4,-2.2 4,-1.0 2,-0.2 -1,-0.2 0.911 114.3 49.7 -63.0 -40.6 3.7 -4.1 8.5 48 48 A K H X S+ 0 0 141 -4,-1.0 4,-0.5 -5,-0.3 -1,-0.2 0.904 121.4 35.1 -63.4 -40.7 0.9 -6.6 8.6 49 49 A I H X S+ 0 0 7 -4,-2.5 4,-4.4 2,-0.2 5,-0.3 0.674 99.0 83.6 -83.3 -22.5 0.4 -6.3 4.9 50 50 A A H X>S+ 0 0 9 -4,-2.6 4,-1.6 -5,-0.3 5,-1.5 0.922 93.0 46.5 -49.9 -47.4 4.1 -5.8 4.1 51 51 A Y H <5S+ 0 0 191 -4,-1.0 -1,-0.2 2,-0.2 -2,-0.2 0.918 114.0 47.5 -62.2 -42.0 4.6 -9.6 4.1 52 52 A Y H <5S+ 0 0 87 -4,-0.5 -2,-0.2 1,-0.3 -1,-0.2 0.952 114.0 48.6 -62.1 -44.0 1.5 -10.0 1.9 53 53 A L H <5S- 0 0 1 -4,-4.4 -1,-0.3 -7,-0.2 -2,-0.2 0.717 96.0-149.3 -62.0 -30.4 2.9 -7.2 -0.2 54 54 A N T <5 + 0 0 124 -4,-1.6 -3,-0.2 -5,-0.3 -4,-0.1 0.901 61.1 118.1 57.8 34.9 6.3 -9.0 -0.2 55 55 A T S - 0 0 73 0, 0.0 4,-0.9 0, 0.0 3,-0.3 -0.369 12.2-152.9 -57.6 131.7 9.9 -4.0 2.2 57 57 A L H > S+ 0 0 9 1,-0.2 4,-5.2 2,-0.2 3,-0.3 0.879 91.3 65.4 -66.4 -41.7 8.4 -0.9 3.7 58 58 A E H 4 S+ 0 0 121 1,-0.2 -1,-0.2 2,-0.2 0, 0.0 0.812 95.0 56.5 -55.2 -38.0 11.8 0.5 4.5 59 59 A D H 4 S+ 0 0 115 -3,-0.3 -1,-0.2 1,-0.1 3,-0.2 0.948 125.9 20.4 -60.2 -50.4 12.8 0.8 0.9 60 60 A I H < S+ 0 0 23 -4,-0.9 2,-3.1 -3,-0.3 -2,-0.2 0.882 113.1 72.0 -85.6 -42.8 9.8 3.1 0.1 61 61 A F S < S+ 0 0 35 -4,-5.2 -1,-0.2 -5,-0.2 -2,-0.1 -0.148 70.4 153.9 -73.1 53.8 9.0 4.2 3.7 62 62 A Q - 0 0 97 -2,-3.1 -3,-0.1 -3,-0.2 -2,-0.1 -0.134 64.6-100.2 -65.7 176.7 12.1 6.4 3.7 63 63 A W - 0 0 196 -62,-0.0 -1,-0.1 2,-0.0 -3,-0.0 0.931 50.2-165.8 -62.9 -43.7 12.1 9.5 5.9 64 64 A Q - 0 0 18 -63,-0.1 -62,-0.2 1,-0.1 -61,-0.1 0.986 13.9-136.3 52.6 76.9 11.3 11.5 2.8 65 65 A P 0 0 96 0, 0.0 -63,-0.2 0, 0.0 -1,-0.1 -0.206 360.0 360.0 -59.6 146.1 12.0 15.1 4.0 66 66 A E 0 0 216 -65,-0.1 -2,-0.0 -64,-0.1 0, 0.0 -0.027 360.0 360.0 -69.9 360.0 9.4 17.6 3.0