==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-MAR-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 19-SEP-12 2LYS . COMPND 2 MOLECULE: CYLR2; . SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; . AUTHOR M.JAREMKO,L.JAREMKO,H.KIM,M.CHO,C.D.SCHWIETERS,K.GILLER,S.BE . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5364.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 36.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 211 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -51.1 -13.7 -2.5 15.9 2 2 A I - 0 0 155 3,-0.0 2,-0.3 64,-0.0 64,-0.0 -0.976 360.0-172.9-133.6 149.0 -11.3 -3.7 13.2 3 3 A I - 0 0 38 -2,-0.3 59,-0.1 1,-0.0 0, 0.0 -0.925 39.5 -77.2-136.1 163.3 -9.9 -2.1 10.1 4 4 A N - 0 0 49 -2,-0.3 2,-0.3 57,-0.1 58,-0.1 -0.218 51.9-173.9 -59.1 146.5 -7.8 -3.2 7.1 5 5 A N > - 0 0 12 1,-0.1 4,-2.3 35,-0.1 3,-0.2 -0.997 37.6-121.8-145.6 149.2 -4.1 -3.5 7.9 6 6 A L H > S+ 0 0 11 -2,-0.3 4,-3.7 2,-0.3 5,-0.2 0.887 116.0 57.7 -60.8 -36.3 -1.0 -4.1 5.9 7 7 A K H > S+ 0 0 114 2,-0.3 4,-2.7 1,-0.2 -1,-0.3 0.939 106.3 49.9 -59.1 -38.3 -0.3 -7.1 8.1 8 8 A L H > S+ 0 0 72 2,-0.3 4,-3.6 1,-0.2 -2,-0.3 0.919 108.4 52.2 -64.0 -37.5 -3.7 -8.3 6.9 9 9 A I H X S+ 0 0 3 -4,-2.3 4,-4.0 2,-0.3 5,-0.3 0.943 107.1 52.3 -61.9 -42.2 -2.4 -7.6 3.5 10 10 A R H X>S+ 0 0 57 -4,-3.7 5,-1.9 2,-0.3 4,-1.3 0.930 109.8 48.4 -57.4 -42.7 0.6 -9.7 4.4 11 11 A E H <5S+ 0 0 103 -4,-2.7 3,-0.4 2,-0.2 -2,-0.3 0.940 113.1 47.4 -62.6 -41.8 -2.0 -12.4 5.4 12 12 A K H <5S+ 0 0 140 -4,-3.6 -2,-0.3 1,-0.3 -1,-0.2 0.894 114.0 46.8 -62.1 -41.1 -3.6 -11.7 2.0 13 13 A K H <5S- 0 0 72 -4,-4.0 -1,-0.3 -5,-0.2 -2,-0.2 0.648 105.1-137.1 -76.2 -13.2 -0.2 -11.9 0.4 14 14 A K T <5 + 0 0 160 -4,-1.3 2,-0.7 -3,-0.4 -3,-0.2 0.943 40.5 169.0 56.2 47.1 0.4 -15.1 2.5 15 15 A I < - 0 0 22 -5,-1.9 -1,-0.2 -6,-0.1 -2,-0.1 -0.849 18.5-156.0 -97.5 118.0 3.9 -13.9 3.2 16 16 A S > - 0 0 50 -2,-0.7 4,-4.5 -3,-0.1 5,-0.2 -0.128 37.0 -86.5 -84.6-179.7 5.7 -15.9 5.9 17 17 A Q H > S+ 0 0 143 2,-0.2 4,-4.9 1,-0.2 5,-0.3 0.906 127.8 51.7 -57.0 -44.3 8.6 -14.7 8.1 18 18 A S H > S+ 0 0 96 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.948 118.1 39.0 -59.4 -45.2 11.2 -15.6 5.6 19 19 A E H > S+ 0 0 72 2,-0.2 4,-2.3 1,-0.2 -2,-0.2 0.920 117.6 49.0 -69.6 -42.3 9.4 -13.7 3.0 20 20 A L H X S+ 0 0 37 -4,-4.5 4,-3.4 2,-0.3 -2,-0.2 0.951 109.3 52.6 -62.9 -42.9 8.5 -11.0 5.5 21 21 A A H < S+ 0 0 52 -4,-4.9 -1,-0.2 1,-0.3 -2,-0.2 0.901 106.9 53.6 -57.5 -36.5 12.1 -10.9 6.5 22 22 A A H >< S+ 0 0 58 -4,-1.8 3,-0.6 -5,-0.3 -1,-0.3 0.913 111.2 44.4 -62.7 -41.3 12.7 -10.4 2.8 23 23 A L H 3< S+ 0 0 25 -4,-2.3 2,-1.4 1,-0.2 3,-0.3 0.861 94.9 81.8 -65.8 -39.0 10.3 -7.5 2.9 24 24 A L T 3< + 0 0 30 -4,-3.4 -1,-0.2 1,-0.3 4,-0.2 0.168 46.4 131.3 -57.5 20.6 12.0 -6.3 6.1 25 25 A E < + 0 0 137 -2,-1.4 2,-0.3 -3,-0.6 -1,-0.3 0.538 64.7 72.4 -55.9 0.7 14.8 -4.7 4.1 26 26 A V S S- 0 0 37 -3,-0.3 2,-0.1 1,-0.1 3,-0.0 -0.765 113.3 -70.8-112.7 158.7 14.0 -1.8 6.4 27 27 A S > - 0 0 77 -2,-0.3 3,-0.9 1,-0.2 4,-0.4 -0.291 40.8-159.5 -52.5 118.7 14.8 -1.6 10.1 28 28 A R G >> S+ 0 0 156 1,-0.2 3,-2.7 -4,-0.2 4,-0.8 0.878 85.0 73.6 -66.7 -38.3 12.5 -4.1 11.8 29 29 A Q G 34 S+ 0 0 136 1,-0.3 4,-0.5 2,-0.2 -1,-0.2 0.729 81.6 72.0 -51.1 -22.4 13.0 -2.3 15.1 30 30 A T G X4 S+ 0 0 49 -3,-0.9 3,-1.7 1,-0.2 -1,-0.3 0.910 92.7 55.3 -60.6 -37.9 10.7 0.4 13.7 31 31 A I G X4 S+ 0 0 57 -3,-2.7 3,-4.9 -4,-0.4 -1,-0.2 0.915 88.6 76.3 -59.6 -42.3 7.9 -2.2 14.1 32 32 A N G >< S+ 0 0 65 -4,-0.8 3,-2.1 1,-0.3 -1,-0.3 0.751 77.0 77.3 -41.7 -24.9 8.9 -2.4 17.8 33 33 A G G X> + 0 0 22 -3,-1.7 4,-3.7 -4,-0.5 3,-1.9 0.763 67.2 89.8 -58.2 -22.3 7.1 0.9 18.0 34 34 A I H <> + 0 0 63 -3,-4.9 4,-0.9 3,-0.3 -1,-0.3 0.758 66.5 78.8 -51.2 -20.4 3.9 -1.2 17.9 35 35 A E H <4 S+ 0 0 148 -3,-2.1 -1,-0.3 1,-0.2 3,-0.2 0.964 123.1 6.3 -49.3 -52.8 4.2 -1.3 21.6 36 36 A K H <4 S+ 0 0 173 -3,-1.9 3,-0.4 -4,-0.2 -2,-0.3 0.543 131.6 63.7-100.6 -15.6 2.8 2.2 21.4 37 37 A N H < + 0 0 59 -4,-3.7 -3,-0.3 1,-0.2 -2,-0.2 0.134 61.1 122.3 -92.3 15.8 2.1 2.0 17.6 38 38 A K < + 0 0 153 -4,-0.9 -1,-0.2 -5,-0.3 -4,-0.1 0.645 53.7 95.8 -57.8 -7.9 -0.4 -0.9 18.2 39 39 A Y S S- 0 0 178 -3,-0.4 3,-0.1 1,-0.2 27,-0.0 -0.091 109.3 -57.8 -62.2 179.3 -2.7 1.5 16.4 40 40 A N S S- 0 0 56 26,-0.1 -1,-0.2 1,-0.1 -35,-0.1 -0.399 83.9 -87.9 -61.2 131.5 -3.1 0.9 12.7 41 41 A P - 0 0 28 0, 0.0 -1,-0.1 0, 0.0 -35,-0.1 -0.207 46.7-109.1 -54.4 141.0 0.5 1.2 11.6 42 42 A S > - 0 0 48 -3,-0.1 4,-4.2 1,-0.1 5,-0.2 -0.171 28.2-107.4 -64.2 162.1 1.6 4.7 10.8 43 43 A L H > S+ 0 0 57 2,-0.2 4,-5.1 1,-0.2 5,-0.3 0.936 124.0 53.5 -60.5 -39.9 2.2 5.6 7.2 44 44 A Q H > S+ 0 0 150 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.951 115.2 40.3 -59.2 -45.3 5.9 5.7 7.9 45 45 A L H > S+ 0 0 20 1,-0.2 4,-1.1 2,-0.2 -2,-0.2 0.911 121.5 44.5 -64.3 -44.1 5.5 2.2 9.3 46 46 A A H X S+ 0 0 7 -4,-4.2 4,-4.4 1,-0.2 5,-0.2 0.876 108.0 56.8 -68.8 -42.0 3.2 1.3 6.5 47 47 A L H X S+ 0 0 80 -4,-5.1 4,-2.7 2,-0.2 -1,-0.2 0.868 100.3 57.3 -61.3 -41.0 5.2 2.8 3.7 48 48 A K H X S+ 0 0 77 -4,-1.4 4,-0.9 -5,-0.3 -1,-0.2 0.975 121.4 28.1 -59.7 -50.1 8.3 0.9 4.4 49 49 A I H >X S+ 0 0 33 -4,-1.1 4,-2.7 1,-0.2 3,-0.7 0.913 119.2 57.6 -70.6 -44.6 6.4 -2.4 4.0 50 50 A A H 3<>S+ 0 0 5 -4,-4.4 5,-0.5 1,-0.3 -3,-0.2 0.787 96.9 65.0 -59.2 -27.0 3.8 -0.9 1.6 51 51 A Y H 3<5S+ 0 0 182 -4,-2.7 -1,-0.3 -5,-0.2 -2,-0.2 0.947 111.2 34.6 -59.5 -47.7 6.7 0.0 -0.7 52 52 A Y H <<5S+ 0 0 84 -4,-0.9 -2,-0.2 -3,-0.7 -1,-0.2 0.863 106.1 83.9 -72.5 -41.0 7.4 -3.7 -1.2 53 53 A L T <5S- 0 0 12 -4,-2.7 2,-2.3 1,-0.1 -43,-0.0 -0.460 84.7-123.8 -70.3 140.4 3.8 -4.7 -1.1 54 54 A N T 5S+ 0 0 133 -2,-0.2 -1,-0.1 2,-0.0 -3,-0.1 -0.500 79.1 101.0 -80.3 72.0 1.8 -4.5 -4.3 55 55 A T S - 0 0 79 0, 0.0 4,-2.5 0, 0.0 5,-0.2 -0.380 14.9-136.5 -61.2 141.3 -1.3 1.5 -3.0 57 57 A L H > S+ 0 0 33 1,-0.2 4,-4.5 2,-0.2 -6,-0.0 0.873 103.7 64.2 -62.2 -38.6 -1.4 3.4 0.3 58 58 A E H 4 S+ 0 0 158 2,-0.2 -1,-0.2 1,-0.2 0, 0.0 0.937 110.3 35.4 -53.4 -50.6 -4.3 5.4 -1.1 59 59 A D H 4 S+ 0 0 120 1,-0.2 -1,-0.2 -3,-0.1 -2,-0.2 0.894 122.1 48.7 -67.4 -42.4 -6.5 2.3 -1.3 60 60 A I H < S+ 0 0 10 -4,-2.5 -2,-0.2 2,-0.1 -1,-0.2 0.816 83.6 110.9 -63.7 -42.3 -4.9 0.9 1.8 61 61 A F < - 0 0 71 -4,-4.5 2,-0.9 -5,-0.2 -57,-0.1 -0.199 54.8-157.3 -46.1 124.4 -5.3 4.1 3.9 62 62 A Q - 0 0 47 -58,-0.1 2,-3.2 2,-0.1 -1,-0.1 -0.818 2.8-164.5-106.2 91.0 -7.9 3.5 6.6 63 63 A W + 0 0 181 -2,-0.9 -2,-0.1 2,-0.0 -1,-0.0 -0.354 41.6 138.8 -73.9 61.6 -9.1 7.0 7.5 64 64 A Q - 0 0 88 -2,-3.2 -2,-0.1 2,-0.2 -61,-0.0 -0.942 53.9-147.9-111.6 129.3 -10.7 5.7 10.7 65 65 A P 0 0 141 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.723 360.0 360.0 -62.3 -24.5 -10.5 7.5 14.0 66 66 A E 0 0 145 -64,-0.0 -2,-0.2 -27,-0.0 -26,-0.1 -0.610 360.0 360.0 -83.3 360.0 -10.4 4.1 15.7