==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-FEB-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PEPTIDE BINDING PROTEIN 30-OCT-12 2M0O . COMPND 2 MOLECULE: PHD FINGER PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.SONG,D.J.PATEL . 88 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8126.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 44.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 5 A S 0 0 183 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 149.7 16.4 -27.4 15.3 2 6 A R - 0 0 228 1,-0.1 3,-0.0 3,-0.0 0, 0.0 -0.824 360.0-179.5-101.5 136.1 16.8 -26.1 11.7 3 7 A L + 0 0 172 -2,-0.4 2,-0.3 1,-0.0 -1,-0.1 0.779 67.3 62.1 -99.1 -37.7 19.4 -23.4 10.8 4 8 A S - 0 0 75 1,-0.1 -1,-0.0 0, 0.0 0, 0.0 -0.663 63.2-152.6 -94.2 148.3 18.6 -23.1 7.0 5 9 A R - 0 0 253 -2,-0.3 -1,-0.1 2,-0.1 -3,-0.0 0.403 46.6-118.4 -96.1 -0.7 15.3 -21.9 5.6 6 10 A S S S+ 0 0 108 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.781 79.8 62.4 63.3 121.0 15.9 -23.9 2.3 7 11 A G - 0 0 79 1,-0.1 2,-0.4 0, 0.0 -2,-0.1 0.721 63.6-148.3 99.2 98.2 16.1 -22.0 -1.0 8 12 A A - 0 0 87 -3,-0.0 2,-0.5 3,-0.0 3,-0.1 -0.838 8.6-164.4-100.9 130.9 18.9 -19.5 -1.6 9 13 A S - 0 0 109 -2,-0.4 0, 0.0 1,-0.3 0, 0.0 -0.967 63.6 -12.3-119.2 121.2 18.3 -16.4 -3.8 10 14 A S + 0 0 111 -2,-0.5 -1,-0.3 1,-0.1 3,-0.0 0.934 62.3 160.6 55.2 101.1 21.3 -14.3 -5.1 11 15 A L + 0 0 157 -3,-0.1 2,-0.4 2,-0.0 -1,-0.1 0.061 47.3 85.7-134.9 22.8 24.5 -15.3 -3.3 12 16 A W - 0 0 205 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.982 61.7-143.6-131.6 140.3 27.2 -14.0 -5.8 13 17 A D - 0 0 155 -2,-0.4 2,-0.2 1,-0.1 -2,-0.0 -0.659 30.7 -98.7 -99.0 156.1 28.7 -10.5 -6.2 14 18 A P - 0 0 94 0, 0.0 -1,-0.1 0, 0.0 4,-0.0 -0.549 24.0-169.4 -77.8 137.2 29.7 -8.8 -9.6 15 19 A A S S+ 0 0 109 -2,-0.2 -2,-0.0 1,-0.1 3,-0.0 0.639 75.0 35.0 -95.7 -20.2 33.3 -8.9 -10.7 16 20 A S S S- 0 0 93 0, 0.0 2,-0.1 0, 0.0 -1,-0.1 -0.898 102.2 -77.6-131.4 160.1 32.9 -6.4 -13.5 17 21 A P - 0 0 133 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 -0.384 48.1-172.4 -61.9 126.8 30.8 -3.2 -14.0 18 22 A A - 0 0 83 -2,-0.1 2,-0.1 -4,-0.0 0, 0.0 -0.988 14.1-135.8-125.8 126.7 27.1 -4.0 -14.9 19 23 A P - 0 0 131 0, 0.0 2,-0.6 0, 0.0 0, 0.0 -0.322 22.1-111.9 -77.3 162.1 24.4 -1.4 -15.9 20 24 A T + 0 0 137 1,-0.2 0, 0.0 -2,-0.1 0, 0.0 -0.855 40.1 160.6 -99.6 121.8 20.8 -1.3 -14.6 21 25 A S + 0 0 123 -2,-0.6 -1,-0.2 1,-0.2 0, 0.0 0.755 69.9 51.2-105.2 -39.2 18.1 -2.1 -17.1 22 26 A G S S- 0 0 72 2,-0.0 -1,-0.2 0, 0.0 2,-0.1 -0.789 76.3-164.3-105.9 89.2 15.2 -3.0 -14.8 23 27 A P - 0 0 112 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.370 7.1-147.4 -71.8 150.5 14.7 -0.1 -12.2 24 28 A R - 0 0 230 -2,-0.1 -2,-0.0 0, 0.0 0, 0.0 -0.951 12.3-137.4-123.8 110.2 12.6 -0.6 -9.0 25 29 A P - 0 0 77 0, 0.0 2,-0.2 0, 0.0 0, 0.0 -0.144 20.5-126.3 -60.2 159.6 10.6 2.4 -7.5 26 30 A R - 0 0 201 1,-0.0 2,-0.6 50,-0.0 0, 0.0 -0.715 21.5 -99.5-109.8 161.1 10.6 3.1 -3.8 27 31 A L + 0 0 25 -2,-0.2 2,-0.3 29,-0.0 25,-0.1 -0.693 57.5 147.6 -82.7 116.1 7.7 3.5 -1.2 28 32 A W > - 0 0 150 -2,-0.6 3,-1.1 21,-0.1 19,-0.4 -0.976 55.5 -79.3-147.4 158.2 7.1 7.2 -0.5 29 33 A E T 3 S+ 0 0 135 -2,-0.3 19,-0.2 1,-0.3 30,-0.1 -0.427 118.0 23.6 -64.0 116.2 4.2 9.6 0.4 30 34 A G T 3 S+ 0 0 38 17,-2.3 2,-0.6 -2,-0.3 -1,-0.3 0.698 85.3 144.0 99.0 26.5 2.3 10.4 -2.8 31 35 A Q < - 0 0 20 -3,-1.1 16,-1.2 16,-0.1 2,-0.7 -0.883 51.2-130.0-101.9 120.0 3.4 7.3 -4.8 32 36 A D E +A 46 0A 83 -2,-0.6 45,-2.6 14,-0.2 14,-0.3 -0.585 40.8 179.1 -71.3 110.9 0.7 5.9 -7.1 33 37 A V E -A 45 0A 0 12,-3.8 12,-2.2 -2,-0.7 2,-0.6 -0.719 32.6-132.4-115.1 162.3 0.7 2.2 -6.2 34 38 A L E -A 44 0A 16 41,-0.5 41,-1.5 -2,-0.2 2,-0.8 -0.923 20.7-162.6-118.4 102.0 -1.1 -0.9 -7.3 35 39 A A B -D 74 0B 3 8,-2.3 8,-0.4 -2,-0.6 2,-0.3 -0.773 13.3-142.3 -90.0 107.0 -2.3 -2.9 -4.2 36 40 A R - 0 0 164 37,-2.9 6,-0.2 -2,-0.8 2,-0.2 -0.551 18.0-153.4 -72.0 125.8 -3.2 -6.4 -5.2 37 41 A W > - 0 0 93 4,-2.0 3,-1.5 -2,-0.3 -1,-0.0 -0.612 26.5-111.8-100.8 162.2 -6.3 -7.7 -3.4 38 42 A T T 3 S+ 0 0 131 1,-0.3 4,-0.1 -2,-0.2 -1,-0.1 0.441 108.7 74.2 -70.9 -0.7 -7.3 -11.4 -2.5 39 43 A D T 3 S- 0 0 113 2,-0.3 -1,-0.3 0, 0.0 3,-0.1 0.467 115.0-108.5 -90.3 -2.9 -10.2 -11.2 -5.0 40 44 A G S < S+ 0 0 64 -3,-1.5 2,-0.3 1,-0.4 -2,-0.1 0.219 87.5 109.3 94.6 -13.1 -7.8 -11.5 -7.9 41 45 A L - 0 0 120 1,-0.1 -4,-2.0 -5,-0.0 -1,-0.4 -0.678 66.0-122.4 -98.3 151.5 -8.4 -7.8 -8.9 42 46 A L - 0 0 30 -2,-0.3 2,-0.4 -6,-0.2 -6,-0.2 -0.414 17.9-144.5 -86.9 164.4 -5.9 -4.9 -8.5 43 47 A Y - 0 0 33 -8,-0.4 -8,-2.3 -2,-0.1 2,-0.4 -0.997 4.7-143.1-134.3 135.1 -6.4 -1.7 -6.6 44 48 A L E +A 34 0A 24 -2,-0.4 18,-1.5 -10,-0.2 2,-0.3 -0.847 36.6 139.4-101.0 133.5 -5.1 1.8 -7.4 45 49 A G E -AB 33 61A 3 -12,-2.2 -12,-3.8 -2,-0.4 2,-0.3 -0.986 43.7-117.6-165.7 159.1 -4.0 4.2 -4.6 46 50 A T E -AB 32 60A 52 14,-2.9 14,-3.1 -2,-0.3 2,-0.5 -0.802 41.4 -99.7-104.3 149.4 -1.4 6.7 -3.5 47 51 A I E + B 0 59A 6 -16,-1.2 -17,-2.3 -19,-0.4 12,-0.3 -0.541 41.8 166.4 -74.7 116.5 0.9 6.3 -0.5 48 52 A K E S+ 0 0 90 10,-2.2 2,-0.3 -2,-0.5 11,-0.2 0.715 71.0 15.2 -96.1 -30.2 -0.3 8.1 2.6 49 53 A K E - B 0 58A 98 9,-2.6 9,-1.3 -21,-0.1 2,-0.4 -0.961 65.3-148.4-144.1 158.8 2.1 6.3 5.0 50 54 A V E - B 0 57A 45 -2,-0.3 2,-0.4 7,-0.3 7,-0.3 -0.998 8.3-171.8-136.8 133.5 5.3 4.2 4.8 51 55 A D E > + B 0 56A 68 5,-3.1 5,-2.9 -2,-0.4 4,-0.5 -0.779 14.0 166.1-123.7 82.3 6.7 1.4 7.0 52 56 A S T 5S+ 0 0 83 -2,-0.4 -1,-0.1 3,-0.2 5,-0.1 0.459 73.5 64.2 -76.3 -1.3 10.2 0.7 5.8 53 57 A A T 5S+ 0 0 72 3,-0.1 -1,-0.2 1,-0.1 -2,-0.0 0.851 116.2 23.2 -88.8 -41.2 10.8 -1.4 9.0 54 58 A R T 5S- 0 0 193 -3,-0.3 -2,-0.2 2,-0.1 -1,-0.1 0.219 111.9-109.4-109.0 11.3 8.3 -4.1 8.4 55 59 A E T 5S+ 0 0 114 -4,-0.5 16,-2.2 1,-0.2 17,-0.3 0.922 79.3 122.3 59.2 48.5 8.2 -3.7 4.6 56 60 A V E < -BC 51 70A 17 -5,-2.9 -5,-3.1 14,-0.2 2,-0.3 -0.886 39.5-171.0-134.9 162.9 4.7 -2.2 4.6 57 61 A C E -BC 50 69A 1 12,-2.5 12,-2.2 -2,-0.3 2,-0.4 -0.979 20.3-129.2-156.4 146.2 2.9 1.0 3.5 58 62 A L E -BC 49 68A 39 -9,-1.3 -9,-2.6 -2,-0.3 -10,-2.2 -0.839 28.8-173.3 -99.6 134.6 -0.4 2.7 3.8 59 63 A V E -BC 47 67A 0 8,-1.3 8,-1.4 -2,-0.4 2,-0.5 -0.986 22.4-134.5-134.3 140.8 -2.1 4.0 0.7 60 64 A Q E -BC 46 66A 64 -14,-3.1 -14,-2.9 -2,-0.4 6,-0.2 -0.817 30.0-146.4 -92.4 124.9 -5.3 6.0 -0.0 61 65 A F E > -B 45 0A 9 4,-3.0 3,-1.5 -2,-0.5 -16,-0.2 -0.470 24.1-104.8 -94.5 163.5 -7.4 4.5 -2.8 62 66 A E T 3 S+ 0 0 70 -18,-1.5 -17,-0.1 1,-0.3 -1,-0.1 0.846 120.3 52.8 -51.1 -44.3 -9.6 6.1 -5.5 63 67 A D T 3 S- 0 0 88 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 -0.055 128.5 -96.3 -87.5 34.7 -12.8 5.2 -3.7 64 68 A D S < S+ 0 0 133 -3,-1.5 2,-0.6 1,-0.2 -2,-0.2 0.768 76.1 154.1 57.9 29.8 -11.5 6.8 -0.4 65 69 A S - 0 0 31 -4,-0.1 -4,-3.0 2,-0.0 2,-0.9 -0.794 33.6-160.2 -93.1 119.6 -10.3 3.4 0.8 66 70 A Q E +C 60 0A 109 -2,-0.6 2,-0.4 -6,-0.2 -6,-0.2 -0.839 25.6 169.0-101.4 95.8 -7.5 3.5 3.3 67 71 A F E -C 59 0A 71 -8,-1.4 -8,-1.3 -2,-0.9 2,-0.5 -0.925 35.1-126.4-117.2 132.9 -6.1 0.0 3.1 68 72 A L E -C 58 0A 110 -2,-0.4 2,-0.3 -10,-0.2 -10,-0.2 -0.649 35.0-175.0 -78.3 118.5 -2.8 -1.3 4.5 69 73 A V E -C 57 0A 10 -12,-2.2 -12,-2.5 -2,-0.5 2,-0.2 -0.889 21.1-125.4-120.4 150.6 -0.7 -3.0 1.8 70 74 A L E >> -C 56 0A 60 -2,-0.3 3,-0.9 -14,-0.2 4,-0.6 -0.624 25.5-118.6 -89.7 149.7 2.6 -4.9 1.8 71 75 A W T 34 S+ 0 0 57 -16,-2.2 -15,-0.1 1,-0.3 -1,-0.1 0.639 116.2 56.5 -61.3 -14.7 5.6 -4.0 -0.4 72 76 A K T 34 S+ 0 0 182 -17,-0.3 -1,-0.3 1,-0.2 -16,-0.1 0.782 108.0 44.1 -86.3 -31.7 5.2 -7.5 -2.0 73 77 A D T <4 S+ 0 0 63 -3,-0.9 -37,-2.9 -37,-0.0 2,-0.4 0.369 99.5 95.8 -92.3 2.9 1.5 -7.0 -3.0 74 78 A I B < -D 35 0B 18 -4,-0.6 -39,-0.2 -39,-0.2 -41,-0.0 -0.791 49.7-174.8-101.7 137.9 2.3 -3.4 -4.3 75 79 A S - 0 0 67 -41,-1.5 -41,-0.5 -2,-0.4 -3,-0.1 -0.941 30.6-121.6-131.0 106.3 3.0 -2.6 -7.9 76 80 A P - 0 0 46 0, 0.0 2,-1.1 0, 0.0 -43,-0.3 -0.263 23.3-133.6 -52.4 121.6 4.1 1.1 -8.7 77 81 A A 0 0 37 -45,-2.6 -45,-0.2 -32,-0.2 -33,-0.0 -0.687 360.0 360.0 -82.9 96.7 1.6 2.6 -11.2 78 82 A A 0 0 146 -2,-1.1 -1,-0.2 0, 0.0 -45,-0.0 0.470 360.0 360.0-141.2 360.0 3.8 4.3 -13.9 79 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 80 331 B A 0 0 166 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 137.6 -18.3 -3.3 -16.5 81 332 B T + 0 0 130 2,-0.0 2,-0.0 3,-0.0 0, 0.0 -0.874 360.0 161.5-115.7 147.6 -17.3 -0.6 -14.0 82 333 B G + 0 0 84 -2,-0.3 4,-0.1 4,-0.0 3,-0.0 -0.403 55.6 63.1-165.8 79.3 -15.9 2.8 -14.6 83 334 B G S S+ 0 0 65 2,-0.2 3,-0.1 -2,-0.0 -2,-0.0 0.296 92.3 48.7-168.7 -30.5 -16.0 5.4 -11.8 84 335 B V S S+ 0 0 50 1,-0.3 2,-0.1 -21,-0.1 -3,-0.0 0.491 106.5 2.7 -93.7-125.1 -13.9 4.2 -8.8 85 336 B X - 0 0 58 1,-0.1 -1,-0.3 -43,-0.1 -2,-0.2 -0.357 53.2-162.4 -67.9 143.8 -10.3 2.9 -9.0 86 337 B K + 0 0 127 -3,-0.1 -43,-0.1 -4,-0.1 -1,-0.1 -0.587 26.5 158.2-127.1 67.1 -8.5 2.8 -12.3 87 338 B P - 0 0 31 0, 0.0 -43,-0.1 0, 0.0 -53,-0.1 0.438 66.4 -48.2 -67.4-148.7 -5.5 0.4 -12.0 88 339 B H 0 0 141 1,-0.1 -54,-0.0 -45,-0.1 -2,-0.0 0.874 360.0 360.0 -55.3 -43.1 -3.6 -1.5 -14.8 89 340 B R 0 0 263 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.329 360.0 360.0-154.3 360.0 -6.9 -2.6 -16.3