==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 20-JUN-02 1M20 . COMPND 2 MOLECULE: CYTOCHROME B5; . SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; . AUTHOR P.YAO,J.WU,Y.-H.WANG,B.-Y.SUN,Z.-X.XIA,Z.-X.HUANG . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5828.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 67.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 14.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 19.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 20.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A A 0 0 163 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 168.3 33.5 0.1 14.8 2 4 A V - 0 0 68 2,-0.0 2,-0.5 73,-0.0 73,-0.1 -0.997 360.0-139.6-141.4 134.3 29.9 -1.0 14.5 3 5 A K - 0 0 137 -2,-0.4 73,-2.8 71,-0.1 2,-0.5 -0.786 19.3-157.3 -92.1 129.0 26.8 -0.1 16.5 4 6 A Y E -a 76 0A 102 -2,-0.5 2,-0.3 71,-0.2 73,-0.2 -0.925 7.3-168.8-112.0 131.4 24.4 -2.9 17.3 5 7 A Y E -a 77 0A 27 71,-2.8 73,-3.2 -2,-0.5 2,-0.2 -0.889 15.5-131.6-115.9 147.5 20.7 -2.4 18.0 6 8 A T > - 0 0 38 -2,-0.3 4,-2.1 71,-0.2 3,-0.4 -0.561 25.9-113.9 -92.5 161.1 18.2 -4.9 19.4 7 9 A L H > S+ 0 0 79 1,-0.2 4,-2.1 2,-0.2 -1,-0.1 0.882 116.8 62.3 -59.3 -35.4 14.8 -5.5 18.0 8 10 A E H 4 S+ 0 0 140 1,-0.2 4,-0.5 2,-0.2 -1,-0.2 0.894 108.2 39.2 -58.7 -42.2 13.4 -4.1 21.2 9 11 A E H >4 S+ 0 0 71 -3,-0.4 3,-0.7 1,-0.2 4,-0.3 0.847 112.5 55.0 -79.2 -31.8 15.0 -0.7 20.6 10 12 A I H >< S+ 0 0 0 -4,-2.1 3,-1.6 1,-0.2 10,-0.3 0.871 98.8 64.4 -66.3 -35.1 14.3 -0.5 16.9 11 13 A Q T 3< S+ 0 0 122 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.757 92.8 62.7 -59.1 -28.0 10.6 -1.1 17.6 12 14 A K T < S+ 0 0 142 -3,-0.7 2,-1.4 -4,-0.5 -1,-0.3 0.674 84.7 79.1 -73.5 -18.7 10.4 2.2 19.4 13 15 A H < + 0 0 52 -3,-1.6 7,-2.3 -4,-0.3 36,-0.4 -0.540 61.6 101.7 -94.2 70.3 11.3 4.2 16.3 14 16 A N B +E 19 0B 94 -2,-1.4 2,-0.2 5,-0.2 5,-0.2 -0.310 57.5 92.0-145.3 50.2 7.9 4.2 14.6 15 17 A N S S- 0 0 74 3,-2.1 3,-0.4 -3,-0.0 -2,-0.0 -0.726 91.9 -80.6-133.9-174.4 6.4 7.6 15.3 16 18 A S S S+ 0 0 113 -2,-0.2 3,-0.1 1,-0.2 -3,-0.0 0.713 126.5 48.5 -63.5 -19.9 6.1 11.1 13.8 17 19 A K S S+ 0 0 174 1,-0.3 2,-0.3 0, 0.0 -1,-0.2 0.743 120.2 19.7 -92.7 -28.0 9.6 11.9 15.1 18 20 A S - 0 0 17 -3,-0.4 -3,-2.1 -6,-0.1 2,-0.4 -0.986 53.2-173.1-150.7 134.7 11.6 8.9 14.1 19 21 A T B +E 14 0B 2 -2,-0.3 11,-2.1 -5,-0.2 12,-0.6 -0.949 16.1 167.1-130.4 110.0 11.2 6.1 11.5 20 22 A W E +B 29 0A 21 -7,-2.3 29,-3.5 -2,-0.4 30,-0.4 -0.887 4.4 173.8-118.3 154.1 13.7 3.2 11.5 21 23 A L E -B 28 0A 4 7,-1.8 7,-2.8 -2,-0.3 2,-0.4 -0.981 26.4-118.2-154.1 160.8 13.5 -0.1 9.7 22 24 A I E +Bc 27 51A 0 28,-2.9 30,-2.7 -2,-0.3 2,-0.4 -0.866 24.2 176.7-106.9 135.5 15.7 -3.1 9.1 23 25 A L E > S-B 26 0A 10 3,-2.5 3,-1.9 -2,-0.4 -2,-0.0 -0.967 76.1 -19.0-137.1 119.9 16.9 -4.4 5.7 24 26 A H T 3 S- 0 0 84 -2,-0.4 3,-0.1 1,-0.3 -1,-0.1 0.903 126.6 -53.3 49.7 49.3 19.3 -7.4 5.5 25 27 A Y T 3 S+ 0 0 108 1,-0.2 52,-2.7 51,-0.1 2,-0.4 0.511 115.0 114.9 65.9 7.9 20.3 -7.0 9.1 26 28 A K E < -BD 23 76A 73 -3,-1.9 -3,-2.5 50,-0.2 2,-0.5 -0.857 62.7-131.7-107.8 145.4 21.2 -3.3 8.7 27 29 A V E -BD 22 75A 0 48,-2.8 47,-2.6 -2,-0.4 48,-1.0 -0.842 21.2-165.9 -99.3 130.2 19.3 -0.6 10.5 28 30 A Y E -BD 21 73A 12 -7,-2.8 -7,-1.8 -2,-0.5 2,-0.9 -0.945 15.9-149.9-118.7 134.2 18.2 2.5 8.5 29 31 A D E +B 20 0A 52 43,-2.4 3,-0.3 -2,-0.4 -9,-0.2 -0.885 24.1 168.4-101.6 102.9 17.0 5.8 9.8 30 32 A L >> + 0 0 14 -11,-2.1 4,-1.4 -2,-0.9 3,-1.4 0.206 35.2 119.0-100.5 15.2 14.6 7.0 7.1 31 33 A T T 34 S+ 0 0 42 -12,-0.6 3,-0.3 1,-0.3 4,-0.2 0.876 83.5 35.1 -46.4 -51.0 13.1 9.8 9.1 32 34 A K T 34 S+ 0 0 201 -3,-0.3 -1,-0.3 1,-0.2 -2,-0.1 0.471 113.5 60.8 -86.5 -2.0 14.2 12.6 6.7 33 35 A Y T X> S+ 0 0 41 -3,-1.4 4,-1.9 1,-0.1 3,-1.7 0.653 74.9 92.9 -97.6 -17.5 13.8 10.4 3.6 34 36 A L T 3< S+ 0 0 8 -4,-1.4 3,-0.2 -3,-0.3 -1,-0.1 0.849 89.7 42.9 -43.3 -49.8 10.0 9.7 3.9 35 37 A E T 34 S+ 0 0 167 -4,-0.2 -1,-0.3 1,-0.2 -2,-0.1 0.618 115.1 49.8 -78.0 -11.4 9.0 12.7 1.8 36 38 A E T <4 S+ 0 0 145 -3,-1.7 -1,-0.2 -4,-0.1 -2,-0.2 0.689 79.0 114.2 -97.5 -22.6 11.6 12.1 -0.9 37 39 A H >< - 0 0 25 -4,-1.9 3,-2.4 -3,-0.2 7,-0.1 -0.294 61.9-145.0 -54.5 118.3 11.0 8.4 -1.4 38 40 A P T 3 S+ 0 0 124 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.793 100.1 57.5 -55.8 -28.9 9.7 7.8 -5.0 39 41 A G T 3 S- 0 0 53 1,-0.3 4,-0.3 2,-0.0 -2,-0.1 0.436 118.1-107.6 -83.6 1.4 7.5 5.0 -3.7 40 42 A G < - 0 0 30 -3,-2.4 4,-0.3 1,-0.1 -1,-0.3 -0.142 19.4 -95.4 95.3 166.8 5.8 7.3 -1.2 41 43 A E S > S+ 0 0 76 2,-0.1 4,-2.7 1,-0.1 3,-0.5 0.727 111.0 70.7 -93.5 -24.1 6.0 7.7 2.6 42 44 A E H > S+ 0 0 149 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.902 95.7 52.1 -59.4 -44.4 3.0 5.4 3.4 43 45 A V H > S+ 0 0 68 -4,-0.3 4,-0.5 1,-0.2 -1,-0.2 0.782 113.2 46.2 -65.6 -25.2 4.8 2.2 2.4 44 46 A L H >> S+ 0 0 20 -3,-0.5 3,-1.0 -4,-0.3 4,-0.8 0.923 108.8 52.3 -81.9 -47.1 7.8 3.2 4.7 45 47 A R H >< S+ 0 0 105 -4,-2.7 3,-0.8 1,-0.3 -2,-0.2 0.871 103.7 60.0 -55.8 -39.3 5.7 4.2 7.7 46 48 A E H 3< S+ 0 0 137 -4,-2.0 -1,-0.3 1,-0.2 -2,-0.2 0.804 110.4 40.2 -59.6 -32.5 3.9 0.8 7.6 47 49 A Q H X< S+ 0 0 54 -3,-1.0 3,-1.8 -4,-0.5 -25,-0.3 0.487 86.1 133.4 -95.5 -5.4 7.1 -1.1 8.0 48 50 A A T << + 0 0 20 -4,-0.8 -27,-0.2 -3,-0.8 -34,-0.1 -0.133 68.7 21.0 -50.2 135.1 8.6 1.3 10.6 49 51 A G T 3 S+ 0 0 16 -29,-3.5 -1,-0.2 -36,-0.4 2,-0.2 0.404 118.0 59.0 87.8 -1.9 10.1 -0.5 13.6 50 52 A G S < S- 0 0 22 -3,-1.8 -28,-2.9 -30,-0.4 2,-0.6 -0.666 94.1 -60.3-140.4-164.2 10.6 -3.8 12.0 51 53 A D B +c 22 0A 76 -30,-0.2 -28,-0.2 -2,-0.2 4,-0.1 -0.774 39.5 169.4 -91.0 120.6 12.2 -5.9 9.2 52 54 A A > + 0 0 6 -30,-2.7 4,-2.4 -2,-0.6 5,-0.2 0.118 39.3 117.1-116.2 19.2 11.2 -4.8 5.7 53 55 A T H > S+ 0 0 22 -31,-0.4 4,-2.4 1,-0.2 5,-0.2 0.915 75.8 47.5 -54.9 -50.9 13.7 -6.9 3.7 54 56 A E H > S+ 0 0 168 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.926 114.3 46.3 -59.4 -45.8 11.1 -9.0 1.9 55 57 A N H > S+ 0 0 78 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.877 111.8 52.6 -63.9 -38.3 8.9 -6.1 0.9 56 58 A F H <>S+ 0 0 33 -4,-2.4 5,-0.8 1,-0.2 4,-0.4 0.899 115.0 40.2 -64.1 -43.4 12.0 -4.1 -0.2 57 59 A E H ><5S+ 0 0 71 -4,-2.4 3,-0.8 -5,-0.2 -2,-0.2 0.834 105.4 65.6 -76.0 -33.1 13.2 -7.0 -2.4 58 60 A D H 3<5S+ 0 0 145 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.830 103.2 47.5 -59.1 -32.6 9.7 -7.8 -3.7 59 61 A V T 3<5S- 0 0 99 -4,-1.1 -1,-0.3 -3,-0.2 -2,-0.2 0.677 108.8-131.8 -81.9 -17.6 9.5 -4.5 -5.4 60 62 A G T < 5 - 0 0 50 -3,-0.8 -3,-0.2 -4,-0.4 -2,-0.1 0.979 20.6-145.1 66.8 61.7 13.0 -5.0 -6.9 61 63 A H < - 0 0 53 -5,-0.8 -1,-0.1 1,-0.1 -5,-0.0 -0.224 17.5-111.5 -59.0 143.7 14.8 -1.7 -6.2 62 64 A S > - 0 0 70 1,-0.1 4,-2.0 4,-0.0 5,-0.2 -0.151 27.3-104.5 -70.8 166.4 17.3 -0.5 -8.8 63 65 A T H > S+ 0 0 107 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.883 121.6 54.7 -59.7 -39.9 21.1 -0.3 -8.2 64 66 A D H > S+ 0 0 131 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.895 106.8 50.0 -61.9 -41.7 20.9 3.4 -7.7 65 67 A A H > S+ 0 0 30 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.912 111.8 48.1 -63.7 -43.0 18.3 3.1 -5.0 66 68 A R H X S+ 0 0 73 -4,-2.0 4,-1.0 2,-0.2 -2,-0.2 0.908 111.2 50.4 -65.1 -41.9 20.4 0.5 -3.2 67 69 A E H >< S+ 0 0 105 -4,-2.5 3,-0.6 1,-0.2 4,-0.3 0.931 112.4 47.5 -61.7 -44.2 23.5 2.7 -3.5 68 70 A L H >< S+ 0 0 79 -4,-2.5 3,-1.9 1,-0.2 4,-0.3 0.898 101.5 64.9 -64.1 -39.6 21.6 5.6 -2.1 69 71 A S H >< S+ 0 0 20 -4,-2.4 3,-1.9 1,-0.3 4,-0.2 0.795 86.7 72.0 -55.0 -30.9 20.1 3.6 0.8 70 72 A K G X< S+ 0 0 122 -4,-1.0 3,-1.2 -3,-0.6 -1,-0.3 0.767 84.8 66.8 -58.9 -25.2 23.6 3.1 2.3 71 73 A T G < S+ 0 0 98 -3,-1.9 -1,-0.3 -4,-0.3 -2,-0.2 0.736 98.3 54.1 -68.8 -19.4 23.7 6.8 3.4 72 74 A F G < S+ 0 0 49 -3,-1.9 -43,-2.4 -4,-0.3 -1,-0.2 0.394 77.1 120.3 -96.3 2.8 20.9 6.1 5.9 73 75 A I E < + D 0 28A 61 -3,-1.2 -45,-0.2 -4,-0.2 3,-0.1 -0.497 27.9 169.4 -70.3 131.5 22.6 3.1 7.7 74 76 A I E - 0 0 54 -47,-2.6 2,-0.3 1,-0.3 -46,-0.2 0.442 61.1 -49.2-118.5 -6.1 23.1 3.8 11.4 75 77 A G E - D 0 27A 6 -48,-1.0 -48,-2.8 -73,-0.1 -1,-0.3 -0.992 60.5 -78.2 166.3-164.3 24.1 0.3 12.6 76 78 A E E -aD 4 26A 65 -73,-2.8 -71,-2.8 -2,-0.3 2,-0.3 -0.881 43.0 -92.3-130.2 162.5 23.3 -3.4 12.5 77 79 A L E -a 5 0A 6 -52,-2.7 -71,-0.2 -2,-0.3 5,-0.1 -0.579 54.6 -99.8 -74.6 130.4 20.9 -5.8 14.2 78 80 A H > - 0 0 58 -73,-3.2 3,-2.2 -2,-0.3 4,-0.4 -0.227 28.5-123.8 -52.1 130.8 22.4 -7.3 17.3 79 81 A P G > S+ 0 0 60 0, 0.0 3,-1.5 0, 0.0 -1,-0.1 0.825 108.5 60.8 -46.1 -39.6 23.7 -10.8 16.5 80 82 A D G 3 S+ 0 0 136 1,-0.3 -2,-0.1 2,-0.2 -74,-0.1 0.724 102.5 51.5 -65.7 -20.7 21.6 -12.4 19.3 81 83 A D G < 0 0 65 -3,-2.2 -1,-0.3 1,-0.1 -3,-0.1 0.396 360.0 360.0 -95.6 2.3 18.3 -11.2 17.6 82 84 A R < 0 0 136 -3,-1.5 -2,-0.2 -4,-0.4 -1,-0.1 0.855 360.0 360.0 -93.5 360.0 19.2 -12.7 14.2