==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 24-JUN-02 1M2M . COMPND 2 MOLECULE: CYTOCHROME B5; . SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; . AUTHOR J.WU,Y.-H.WANG,J.-H.GAN,W.-H.WANG,B.-Y.SUN,Z.-X.HUANG,Z.- . 82 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5445.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 72.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 14.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 17 20.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 22.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A A 0 0 157 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-176.8 8.2 6.9 30.9 2 4 A V - 0 0 67 73,-0.1 2,-0.5 1,-0.0 73,-0.1 -0.650 360.0-147.7 -84.9 133.0 8.2 5.0 27.5 3 5 A K - 0 0 124 -2,-0.4 73,-2.8 71,-0.1 2,-0.4 -0.866 13.3-149.9-100.6 130.1 5.6 5.9 25.0 4 6 A Y E -a 76 0A 105 -2,-0.5 2,-0.4 71,-0.2 73,-0.2 -0.808 10.4-168.2-104.4 143.6 4.3 3.2 22.7 5 7 A Y E -a 77 0A 34 71,-2.5 73,-2.7 -2,-0.4 2,-0.1 -0.987 19.5-131.5-126.8 135.2 3.1 3.4 19.1 6 8 A T > - 0 0 57 -2,-0.4 4,-2.2 71,-0.2 3,-0.4 -0.452 26.6-111.1 -81.1 160.5 1.3 0.6 17.3 7 9 A L H > S+ 0 0 58 1,-0.2 4,-2.2 2,-0.2 -1,-0.1 0.853 118.8 57.8 -58.4 -35.8 2.4 -0.4 13.8 8 10 A E H 4 S+ 0 0 147 1,-0.2 4,-0.4 2,-0.2 -1,-0.2 0.876 108.3 44.2 -62.8 -40.7 -1.0 1.0 12.5 9 11 A E H >4 S+ 0 0 71 -3,-0.4 3,-0.8 1,-0.2 4,-0.3 0.858 111.8 53.1 -72.9 -37.5 -0.2 4.5 13.9 10 12 A I H >< S+ 0 0 0 -4,-2.2 3,-1.9 1,-0.2 10,-0.3 0.900 99.9 62.7 -64.7 -40.7 3.3 4.5 12.7 11 13 A Q T 3< S+ 0 0 102 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.688 91.8 65.8 -58.8 -20.7 2.2 3.6 9.1 12 14 A K T < S+ 0 0 125 -3,-0.8 2,-1.1 -4,-0.4 -1,-0.3 0.704 88.1 71.9 -75.3 -19.0 0.3 6.9 8.9 13 15 A H < + 0 0 33 -3,-1.9 7,-2.4 -4,-0.3 36,-0.6 -0.563 60.5 111.8 -98.7 69.7 3.6 8.8 9.1 14 16 A N B +E 19 0B 94 -2,-1.1 2,-0.2 5,-0.2 5,-0.2 -0.095 58.7 83.5-128.8 30.8 4.9 8.0 5.6 15 17 A N S S- 0 0 62 3,-2.2 3,-0.3 -3,-0.1 34,-0.1 -0.710 89.5 -95.7-129.7 180.0 4.7 11.5 4.0 16 18 A S S S+ 0 0 68 1,-0.2 3,-0.2 -2,-0.2 -1,-0.0 0.845 121.9 54.3 -64.3 -36.9 6.5 14.8 3.7 17 19 A K S S+ 0 0 185 1,-0.3 2,-0.3 -3,-0.0 -1,-0.2 0.783 127.7 13.4 -68.6 -26.4 4.6 16.4 6.5 18 20 A S - 0 0 20 -3,-0.3 -3,-2.2 -6,-0.1 2,-0.6 -0.849 63.4-177.3-157.5 114.4 5.6 13.5 8.8 19 21 A T B +E 14 0B 0 -2,-0.3 11,-2.4 -3,-0.2 12,-0.7 -0.942 14.1 165.5-118.5 111.9 8.2 10.8 8.3 20 22 A W E +B 29 0A 19 -7,-2.4 29,-4.0 -2,-0.6 30,-0.4 -0.925 5.1 173.4-121.3 148.9 8.6 8.1 11.0 21 23 A L E -B 28 0A 6 7,-1.7 7,-2.9 -2,-0.3 2,-0.4 -0.977 26.3-119.0-150.9 161.3 10.4 4.8 10.8 22 24 A I E +Bc 27 51A 1 28,-2.7 30,-2.5 -2,-0.3 31,-0.5 -0.875 24.3 175.1-108.6 135.3 11.3 1.9 13.1 23 25 A L E > S-B 26 0A 9 3,-2.3 3,-2.2 -2,-0.4 -2,-0.0 -0.977 76.1 -19.9-137.3 120.0 14.9 0.8 13.9 24 26 A H T 3 S- 0 0 86 -2,-0.4 3,-0.1 1,-0.3 -1,-0.1 0.893 126.8 -50.8 47.8 51.3 15.4 -2.0 16.5 25 27 A Y T 3 S+ 0 0 118 1,-0.2 52,-3.0 51,-0.1 2,-0.3 0.365 115.6 115.1 72.4 -6.2 11.9 -1.5 18.1 26 28 A K E < -BD 23 76A 67 -3,-2.2 -3,-2.3 50,-0.2 2,-0.5 -0.771 61.3-134.5 -99.5 144.3 12.5 2.2 18.5 27 29 A V E -BD 22 75A 0 48,-2.8 47,-2.6 -2,-0.3 48,-0.9 -0.841 19.7-165.2-101.0 128.2 10.4 4.9 16.6 28 30 A Y E -BD 21 73A 11 -7,-2.9 -7,-1.7 -2,-0.5 2,-0.9 -0.937 16.1-151.6-116.6 132.1 12.2 7.8 15.0 29 31 A D E +B 20 0A 54 43,-2.3 -9,-0.2 -2,-0.4 3,-0.2 -0.885 24.5 167.3 -99.0 105.4 10.7 11.0 13.7 30 32 A L >> + 0 0 15 -11,-2.4 3,-1.7 -2,-0.9 4,-1.5 0.253 35.4 117.3-103.1 12.1 13.0 12.0 10.9 31 33 A T T 34 S+ 0 0 37 -12,-0.7 3,-0.4 1,-0.3 4,-0.3 0.877 83.3 37.8 -46.9 -49.1 10.9 14.7 9.3 32 34 A K T 34 S+ 0 0 189 -3,-0.2 -1,-0.3 1,-0.2 3,-0.1 0.526 113.3 59.4 -83.2 -4.1 13.4 17.5 10.0 33 35 A F T X> S+ 0 0 33 -3,-1.7 4,-2.0 1,-0.1 3,-1.7 0.657 76.8 91.8 -96.3 -18.1 16.3 15.3 9.2 34 36 A L T 3< S+ 0 0 7 -4,-1.5 -1,-0.1 -3,-0.4 -2,-0.1 0.847 90.6 42.0 -43.5 -49.3 15.4 14.4 5.6 35 37 A E T 34 S+ 0 0 172 -4,-0.3 -1,-0.3 1,-0.2 -2,-0.1 0.588 117.1 47.6 -80.7 -8.9 17.3 17.2 4.0 36 38 A E T <4 S+ 0 0 143 -3,-1.7 -2,-0.2 -4,-0.1 -1,-0.2 0.622 79.3 115.4-102.7 -20.1 20.4 16.9 6.3 37 39 A H >< - 0 0 28 -4,-2.0 3,-1.9 1,-0.2 7,-0.1 -0.305 61.2-145.2 -54.6 122.5 20.8 13.1 6.0 38 40 A P T 3 S+ 0 0 127 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.839 98.8 57.7 -60.2 -31.0 24.1 12.4 4.2 39 41 A G T 3 S- 0 0 50 1,-0.2 4,-0.4 2,-0.0 -2,-0.1 0.410 117.3-109.0 -80.4 3.0 22.6 9.4 2.5 40 42 A G < - 0 0 30 -3,-1.9 4,-0.3 1,-0.1 -1,-0.2 -0.123 21.5 -87.4 94.6 168.0 19.9 11.5 0.9 41 43 A E S >> S+ 0 0 66 2,-0.1 4,-2.7 1,-0.1 3,-0.6 0.797 111.1 70.1 -85.0 -32.2 16.2 12.0 1.4 42 44 A A H 3> S+ 0 0 75 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.887 94.5 51.0 -55.6 -49.1 15.1 9.2 -0.9 43 45 A V H 3> S+ 0 0 80 -4,-0.4 4,-0.6 1,-0.2 -1,-0.2 0.784 114.9 45.7 -63.4 -25.6 16.2 6.2 1.1 44 46 A L H X> S+ 0 0 17 -3,-0.6 3,-0.9 -4,-0.3 4,-0.8 0.934 111.5 49.5 -80.1 -50.8 14.4 7.6 4.2 45 47 A R H >< S+ 0 0 92 -4,-2.7 3,-0.6 1,-0.2 -2,-0.2 0.859 107.5 56.5 -54.1 -40.0 11.2 8.5 2.3 46 48 A A H 3< S+ 0 0 86 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.780 113.1 39.4 -65.1 -29.3 11.0 5.0 0.8 47 49 A Q H X< S+ 0 0 52 -3,-0.9 3,-1.3 -4,-0.6 -1,-0.2 0.435 86.6 132.8 -99.8 -2.6 11.1 3.3 4.2 48 50 A A T << + 0 0 15 -4,-0.8 -27,-0.2 -3,-0.6 -34,-0.2 -0.149 67.5 22.9 -52.7 140.6 8.8 5.8 5.9 49 51 A G T 3 S+ 0 0 7 -29,-4.0 2,-0.2 -36,-0.6 -1,-0.2 0.571 117.3 61.1 80.4 10.4 6.0 4.3 8.0 50 52 A G S < S- 0 0 22 -3,-1.3 -28,-2.7 -30,-0.4 2,-0.6 -0.830 94.3 -62.5-150.8-171.4 7.7 0.9 8.6 51 53 A D B +c 22 0A 94 -2,-0.2 -28,-0.2 -30,-0.2 3,-0.2 -0.733 41.3 166.9 -86.5 116.6 10.6 -1.1 9.9 52 54 A A > + 0 0 6 -30,-2.5 4,-2.4 -2,-0.6 5,-0.2 0.162 37.0 119.2-114.3 17.4 13.9 -0.1 8.2 53 55 A T H > S+ 0 0 22 -31,-0.5 4,-2.3 1,-0.2 5,-0.2 0.865 75.4 47.9 -50.9 -46.0 16.2 -1.9 10.6 54 56 A A H > S+ 0 0 75 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.941 113.0 46.6 -64.3 -48.4 17.7 -4.2 8.0 55 57 A N H > S+ 0 0 92 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.868 112.2 52.5 -61.6 -37.3 18.4 -1.5 5.4 56 58 A F H X>S+ 0 0 32 -4,-2.4 5,-0.6 1,-0.2 4,-0.6 0.929 114.6 40.6 -63.8 -48.0 19.9 0.7 8.1 57 59 A E H ><5S+ 0 0 70 -4,-2.3 3,-0.6 -5,-0.2 -2,-0.2 0.816 106.4 65.0 -71.4 -31.8 22.3 -2.0 9.2 58 60 A A H 3<5S+ 0 0 85 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.766 101.6 49.7 -63.3 -27.8 23.1 -3.2 5.7 59 61 A V H 3<5S- 0 0 103 -4,-1.0 -1,-0.2 -3,-0.5 -2,-0.2 0.675 107.6-129.0 -85.9 -17.9 24.7 0.2 4.9 60 62 A G T <<5 - 0 0 54 -3,-0.6 -3,-0.1 -4,-0.6 -2,-0.1 0.985 22.6-151.5 70.7 64.1 26.9 0.1 8.0 61 63 A H < - 0 0 54 -5,-0.6 -1,-0.1 1,-0.1 -5,-0.0 -0.313 16.3-115.7 -66.5 147.7 26.4 3.4 9.8 62 64 A S > - 0 0 68 1,-0.1 4,-2.0 -2,-0.0 5,-0.1 -0.066 27.8-102.2 -73.4 177.5 29.3 4.8 11.9 63 65 A T H > S+ 0 0 98 2,-0.2 4,-2.8 1,-0.2 5,-0.2 0.891 122.9 54.5 -69.0 -40.4 29.2 5.3 15.7 64 66 A D H > S+ 0 0 124 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.908 108.5 48.9 -59.7 -42.7 28.7 9.1 15.2 65 67 A A H > S+ 0 0 31 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.925 112.8 47.2 -63.0 -46.1 25.6 8.4 13.0 66 68 A R H X S+ 0 0 83 -4,-2.0 4,-1.0 2,-0.2 -2,-0.2 0.881 111.2 50.7 -64.1 -39.9 24.2 5.9 15.6 67 69 A E H >< S+ 0 0 112 -4,-2.8 3,-0.7 1,-0.2 4,-0.5 0.937 111.8 48.3 -63.3 -44.8 24.8 8.4 18.5 68 70 A L H >< S+ 0 0 83 -4,-2.4 3,-1.4 1,-0.2 4,-0.4 0.878 100.4 65.7 -62.8 -38.6 23.1 11.1 16.5 69 71 A S H >< S+ 0 0 22 -4,-2.2 3,-1.8 1,-0.3 -1,-0.2 0.819 88.4 69.9 -54.3 -32.3 20.1 8.8 15.7 70 72 A K G X< S+ 0 0 137 -4,-1.0 3,-1.7 -3,-0.7 -1,-0.3 0.825 86.6 64.3 -56.7 -35.3 19.2 8.7 19.4 71 73 A T G < S+ 0 0 103 -3,-1.4 -1,-0.3 -4,-0.5 -2,-0.2 0.687 98.7 56.4 -64.9 -16.2 18.1 12.4 19.4 72 74 A F G < S+ 0 0 43 -3,-1.8 -43,-2.3 -4,-0.4 -1,-0.3 0.430 77.3 118.6 -95.9 2.0 15.3 11.5 17.0 73 75 A I E < + D 0 28A 62 -3,-1.7 -45,-0.2 -4,-0.2 3,-0.1 -0.502 28.8 168.4 -72.0 130.6 13.7 8.8 19.1 74 76 A I E - 0 0 53 -47,-2.6 2,-0.3 1,-0.3 -46,-0.1 0.385 61.1 -45.9-120.7 -1.4 10.1 9.6 20.1 75 77 A G E - D 0 27A 8 -48,-0.9 -48,-2.8 -73,-0.1 -1,-0.3 -0.980 62.6 -80.2 162.2-167.8 8.9 6.3 21.5 76 78 A E E -aD 4 26A 62 -73,-2.8 -71,-2.5 -2,-0.3 2,-0.3 -0.881 41.9 -93.1-129.0 161.1 8.9 2.5 21.0 77 79 A L E -a 5 0A 8 -52,-3.0 -71,-0.2 -2,-0.3 5,-0.1 -0.537 57.0 -97.6 -70.8 129.8 6.9 -0.0 18.9 78 80 A H > - 0 0 57 -73,-2.7 3,-2.4 -2,-0.3 4,-0.4 -0.235 32.5-123.2 -50.8 132.8 4.1 -1.4 21.0 79 81 A P G > S+ 0 0 52 0, 0.0 3,-1.2 0, 0.0 -1,-0.1 0.804 109.3 60.2 -48.2 -38.7 5.2 -4.8 22.5 80 82 A D G 3 S+ 0 0 139 1,-0.2 -2,-0.1 2,-0.2 -74,-0.0 0.618 103.6 52.2 -69.9 -11.0 2.3 -6.7 21.0 81 83 A D G < 0 0 64 -3,-2.4 -1,-0.2 1,-0.1 -3,-0.1 0.439 360.0 360.0-101.6 -3.9 3.5 -5.6 17.5 82 84 A R < 0 0 126 -3,-1.2 -2,-0.2 -4,-0.4 -1,-0.1 0.728 360.0 360.0 -79.0 360.0 7.1 -6.8 17.9