==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-JUN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 21-DEC-12 2M2I . COMPND 2 MOLECULE: DNA REPAIR PROTEIN REV1; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR Y.PUSTOVALOVA,M.W.MACIEJEWSKI,D.M.KORZHNEV . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6346.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 57 60.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 12 12.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 20 21.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 233 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -54.5 8.7 -5.5 -3.2 2 2 A S - 0 0 72 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.988 360.0-160.0-133.2 120.5 5.7 -6.9 -1.3 3 3 A S - 0 0 109 -2,-0.4 -1,-0.1 1,-0.1 3,-0.1 0.945 14.4-179.8 -62.1 -55.4 5.8 -10.0 1.0 4 4 A Q + 0 0 126 1,-0.2 3,-0.4 2,-0.1 2,-0.3 0.749 32.9 144.3 57.3 29.4 1.9 -10.7 0.8 5 5 A S + 0 0 93 1,-0.2 -1,-0.2 2,-0.0 -2,-0.1 -0.752 56.6 14.8-106.5 145.3 2.7 -13.7 3.2 6 6 A S S S+ 0 0 53 -2,-0.3 2,-1.0 76,-0.2 3,-0.3 0.810 75.9 160.7 58.5 38.7 0.4 -15.0 6.0 7 7 A K > + 0 0 120 -3,-0.4 3,-1.9 1,-0.2 4,-0.3 -0.125 12.9 141.9 -83.5 38.0 -2.4 -12.9 4.4 8 8 A I T 3 S+ 0 0 9 -2,-1.0 -1,-0.2 1,-0.3 3,-0.1 0.757 79.6 29.6 -52.1 -34.7 -5.1 -15.0 6.2 9 9 A F T > S+ 0 0 0 25,-1.1 3,-1.4 -3,-0.3 28,-0.7 0.146 84.6 122.5-114.3 16.7 -7.3 -11.8 6.9 10 10 A K T < S+ 0 0 118 -3,-1.9 -2,-0.1 24,-0.3 -1,-0.1 0.816 88.7 24.0 -54.7 -43.8 -6.2 -9.8 3.7 11 11 A N T 3 S+ 0 0 147 -4,-0.3 2,-0.5 -3,-0.1 -1,-0.3 0.281 109.0 100.1-103.0 7.2 -9.8 -9.4 2.2 12 12 A C < - 0 0 7 -3,-1.4 25,-2.0 19,-0.1 2,-0.5 -0.861 52.9-163.8-108.4 118.9 -11.5 -9.9 5.7 13 13 A V E -a 37 0A 39 -2,-0.5 37,-1.8 23,-0.2 36,-1.4 -0.906 20.7-161.2 -89.8 125.4 -12.8 -7.0 7.9 14 14 A I E -ab 38 50A 0 23,-1.8 25,-1.9 -2,-0.5 2,-0.3 -0.957 12.7-171.3-117.6 127.2 -13.4 -8.4 11.4 15 15 A Y E -ab 39 51A 11 35,-2.5 37,-1.7 -2,-0.5 2,-0.4 -0.785 14.9-144.8-103.5 150.9 -15.5 -6.9 14.2 16 16 A I E - b 0 52A 0 23,-0.5 2,-0.3 -2,-0.3 37,-0.2 -0.991 16.6-177.3-123.0 130.9 -15.4 -8.4 17.8 17 17 A N + 0 0 56 35,-2.7 37,-0.4 -2,-0.4 2,-0.1 -0.968 49.7 5.7-128.5 141.7 -18.5 -8.5 20.1 18 18 A G S S- 0 0 45 -2,-0.3 2,-0.7 35,-0.2 6,-0.1 -0.347 106.7 -41.8 82.1-168.4 -18.8 -9.8 23.7 19 19 A Y + 0 0 221 36,-0.1 2,-0.3 -2,-0.1 4,-0.1 -0.883 66.4 178.8-101.2 108.5 -15.9 -10.8 26.0 20 20 A T - 0 0 8 -2,-0.7 4,-0.1 2,-0.1 7,-0.1 -0.851 28.3-105.3-110.1 139.7 -13.4 -12.9 23.9 21 21 A K S S+ 0 0 180 -2,-0.3 2,-0.2 2,-0.1 -2,-0.0 -0.960 105.6 36.7-106.0 126.9 -10.0 -14.4 25.1 22 22 A P S S- 0 0 48 0, 0.0 5,-0.2 0, 0.0 -2,-0.1 0.621 118.1 -88.0 -78.8 175.2 -7.6 -13.1 24.2 23 23 A G > - 0 0 25 -2,-0.2 4,-2.4 1,-0.1 3,-0.3 0.069 28.8-113.7 -52.2 154.0 -8.7 -9.4 24.3 24 24 A R H > S+ 0 0 94 1,-0.2 4,-1.9 2,-0.2 5,-0.1 0.803 119.6 54.9 -58.0 -34.8 -10.4 -7.7 21.3 25 25 A L H > S+ 0 0 127 2,-0.2 4,-1.8 3,-0.1 -1,-0.2 0.937 110.4 45.6 -60.0 -45.9 -7.3 -5.4 21.0 26 26 A Q H > S+ 0 0 75 -3,-0.3 4,-2.3 2,-0.2 -2,-0.2 0.927 113.2 47.5 -67.1 -50.9 -5.0 -8.5 20.7 27 27 A L H X S+ 0 0 0 -4,-2.4 4,-1.5 1,-0.2 -1,-0.2 0.905 111.7 51.7 -55.9 -44.5 -7.2 -10.4 18.2 28 28 A H H X S+ 0 0 14 -4,-1.9 4,-2.1 -5,-0.2 -1,-0.2 0.853 109.5 50.1 -62.6 -36.7 -7.5 -7.2 16.1 29 29 A E H X S+ 0 0 100 -4,-1.8 4,-2.5 2,-0.2 5,-0.2 0.900 107.0 54.2 -66.2 -41.6 -3.7 -6.9 16.2 30 30 A M H X S+ 0 0 54 -4,-2.3 4,-0.5 1,-0.2 -2,-0.2 0.814 110.8 48.0 -60.5 -33.5 -3.4 -10.6 15.0 31 31 A I H ><>S+ 0 0 0 -4,-1.5 5,-2.4 -5,-0.2 3,-0.6 0.939 111.5 48.1 -70.1 -49.8 -5.7 -9.6 12.1 32 32 A V H ><5S+ 0 0 66 -4,-2.1 3,-1.7 1,-0.2 -2,-0.2 0.904 108.0 52.9 -61.4 -48.1 -3.7 -6.4 11.1 33 33 A L H 3<5S+ 0 0 136 -4,-2.5 -1,-0.2 1,-0.3 -2,-0.2 0.740 105.4 57.7 -62.2 -23.4 -0.2 -8.1 11.2 34 34 A H T <<5S- 0 0 21 -3,-0.6 -25,-1.1 -4,-0.5 -1,-0.3 -0.037 130.9 -96.2 -95.9 27.0 -1.7 -10.8 8.8 35 35 A G T < 5S+ 0 0 37 -3,-1.7 -3,-0.2 1,-0.2 -2,-0.2 0.611 83.6 139.8 72.8 16.7 -2.6 -8.0 6.3 36 36 A G < - 0 0 11 -5,-2.4 2,-0.3 -7,-0.1 -1,-0.2 -0.251 45.3-135.3 -95.4 175.8 -6.1 -7.8 7.6 37 37 A K E -a 13 0A 130 -25,-2.0 -23,-1.8 -28,-0.7 2,-0.3 -0.871 16.4-162.5-128.7 155.5 -8.7 -5.1 8.5 38 38 A F E -a 14 0A 88 -25,-0.3 2,-0.3 -2,-0.3 -23,-0.2 -0.873 11.4-137.3-138.5 168.7 -11.0 -4.6 11.5 39 39 A L E -a 15 0A 29 -25,-1.9 -23,-0.5 -2,-0.3 3,-0.1 -0.983 6.3-150.4-130.8 140.9 -14.2 -2.7 12.6 40 40 A H S S- 0 0 144 -2,-0.3 2,-0.3 1,-0.3 -24,-0.2 0.911 75.9 -26.1 -74.5 -46.4 -14.8 -0.9 16.0 41 41 A Y - 0 0 142 -26,-0.1 -1,-0.3 -24,-0.0 2,-0.3 -0.918 57.9-135.1-174.2 138.6 -18.7 -1.3 16.2 42 42 A L - 0 0 21 -2,-0.3 2,-0.3 -3,-0.1 4,-0.1 -0.796 2.5-160.0-106.9 150.3 -21.6 -1.8 13.7 43 43 A S - 0 0 99 -2,-0.3 2,-1.7 2,-0.2 3,-0.1 -0.707 69.9 -69.9-128.7 70.5 -25.1 -0.1 13.8 44 44 A S S S+ 0 0 118 -2,-0.3 -2,-0.0 1,-0.1 2,-0.0 -0.167 104.8 112.5 75.4 -40.8 -27.2 -2.6 11.7 45 45 A K S S- 0 0 160 -2,-1.7 2,-1.6 1,-0.1 -2,-0.2 -0.258 78.8-110.1 -70.4 148.4 -25.4 -1.7 8.3 46 46 A K + 0 0 153 1,-0.2 -1,-0.1 -4,-0.1 3,-0.0 -0.609 67.7 131.8 -80.7 82.6 -23.2 -4.2 6.4 47 47 A T + 0 0 86 -2,-1.6 2,-0.3 -34,-0.0 -1,-0.2 -0.018 65.0 52.9-120.1 24.2 -19.8 -2.7 7.0 48 48 A V - 0 0 15 1,-0.1 -34,-0.1 -9,-0.0 3,-0.1 -0.978 52.7-165.1-154.2 155.8 -18.2 -6.0 8.1 49 49 A T S S+ 0 0 61 -36,-1.4 19,-2.4 1,-0.3 2,-0.3 0.598 80.6 37.4-114.6 -25.8 -17.8 -9.6 6.8 50 50 A H E -bc 14 68A 6 -37,-1.8 -35,-2.5 17,-0.2 2,-0.3 -0.991 60.7-169.1-133.0 138.8 -16.7 -11.5 10.0 51 51 A I E -bc 15 69A 0 17,-1.2 19,-2.5 -2,-0.3 2,-0.5 -0.941 12.6-146.2-123.6 143.3 -17.7 -11.0 13.7 52 52 A V E +bc 16 70A 0 -37,-1.7 -35,-2.7 -2,-0.3 2,-0.3 -0.970 25.5 163.8-115.7 119.8 -15.9 -12.7 16.7 53 53 A A - 0 0 2 17,-2.4 3,-0.2 -2,-0.5 -35,-0.2 -0.884 43.8-135.4-127.3 157.9 -17.9 -13.7 19.8 54 54 A S S S- 0 0 79 1,-0.4 2,-0.3 -37,-0.4 -1,-0.1 0.912 101.5 -11.2 -70.8 -49.4 -17.2 -16.0 22.8 55 55 A N S S- 0 0 114 -3,-0.1 -1,-0.4 16,-0.1 -36,-0.1 -0.964 71.2-147.5-147.0 147.4 -20.7 -17.4 22.2 56 56 A L - 0 0 2 -2,-0.3 5,-0.1 -3,-0.2 -3,-0.0 -0.975 20.8-125.6-123.5 116.2 -23.4 -15.9 19.9 57 57 A P > - 0 0 74 0, 0.0 4,-1.2 0, 0.0 3,-0.5 -0.235 24.5-111.6 -64.7 156.3 -27.2 -16.3 20.9 58 58 A L H > S+ 0 0 132 1,-0.3 4,-1.2 2,-0.2 3,-0.3 0.850 115.3 46.1 -61.1 -47.3 -29.7 -17.9 18.4 59 59 A K H > S+ 0 0 145 1,-0.2 4,-1.5 2,-0.2 -1,-0.3 0.778 113.5 52.4 -67.2 -27.0 -31.8 -14.8 17.5 60 60 A K H > S+ 0 0 81 -3,-0.5 4,-1.8 2,-0.2 -2,-0.2 0.696 100.2 60.6 -81.5 -23.1 -28.5 -12.9 17.1 61 61 A R H < S+ 0 0 65 -4,-1.2 -2,-0.2 -3,-0.3 -1,-0.2 0.821 110.3 42.7 -65.3 -34.2 -27.3 -15.7 14.7 62 62 A I H >< S+ 0 0 120 -4,-1.2 3,-1.1 2,-0.2 -2,-0.2 0.852 113.0 52.5 -72.8 -39.6 -30.4 -14.6 12.7 63 63 A E H 3< S+ 0 0 112 -4,-1.5 3,-0.2 1,-0.3 -2,-0.2 0.821 121.4 32.7 -63.1 -34.5 -29.4 -10.9 13.4 64 64 A F T >< S+ 0 0 40 -4,-1.8 3,-0.9 1,-0.1 5,-0.4 -0.073 79.1 119.6-117.6 27.4 -25.9 -11.6 12.1 65 65 A A T < S+ 0 0 51 -3,-1.1 -1,-0.1 1,-0.2 -2,-0.1 0.785 79.1 55.0 -60.1 -28.0 -26.8 -14.3 9.4 66 66 A N T 3 S+ 0 0 93 -4,-0.2 2,-0.4 -3,-0.2 -1,-0.2 0.705 104.5 62.8 -76.4 -23.0 -25.3 -11.8 6.9 67 67 A Y S < S- 0 0 11 -3,-0.9 2,-1.6 -6,-0.1 -17,-0.2 -0.911 87.8-124.0-113.7 126.7 -22.0 -11.7 8.9 68 68 A K E -c 50 0A 72 -19,-2.4 -17,-1.2 -2,-0.4 2,-0.3 -0.546 33.6-165.7 -72.2 87.6 -19.8 -14.8 9.4 69 69 A V E +c 51 0A 0 -2,-1.6 23,-1.9 -5,-0.4 24,-1.5 -0.652 15.3 169.1 -76.1 134.5 -19.6 -14.9 13.2 70 70 A V E -cD 52 91A 0 -19,-2.5 -17,-2.4 -2,-0.3 21,-0.2 -0.770 37.6 -92.5-135.7 174.1 -16.9 -17.2 14.6 71 71 A S > - 0 0 21 19,-1.1 3,-2.0 -2,-0.2 4,-0.5 -0.640 40.2-112.0 -86.1 152.4 -15.1 -18.1 17.8 72 72 A P T >> S+ 0 0 7 0, 0.0 4,-2.6 0, 0.0 3,-0.8 0.754 112.5 77.4 -56.3 -23.5 -11.7 -16.2 18.6 73 73 A D H 3> S+ 0 0 87 1,-0.2 4,-2.0 2,-0.2 5,-0.4 0.712 83.7 62.9 -59.1 -26.6 -10.0 -19.6 18.1 74 74 A W H <> S+ 0 0 0 -3,-2.0 4,-1.4 2,-0.2 -1,-0.2 0.924 112.3 35.4 -61.0 -44.0 -10.4 -19.0 14.3 75 75 A I H <> S+ 0 0 0 -3,-0.8 4,-2.0 -4,-0.5 -2,-0.2 0.957 120.6 47.2 -75.6 -52.5 -8.1 -16.0 14.6 76 76 A V H X S+ 0 0 43 -4,-2.6 4,-1.7 1,-0.2 -3,-0.2 0.925 118.5 39.2 -54.9 -53.7 -5.7 -17.4 17.3 77 77 A D H X S+ 0 0 42 -4,-2.0 4,-1.9 2,-0.2 -1,-0.2 0.867 112.0 55.3 -73.1 -39.1 -5.2 -20.8 15.7 78 78 A S H X>S+ 0 0 0 -4,-1.4 5,-1.6 -5,-0.4 4,-0.9 0.898 110.3 47.8 -60.6 -41.6 -4.9 -19.5 12.0 79 79 A V H <5S+ 0 0 26 -4,-2.0 -1,-0.2 2,-0.2 -2,-0.2 0.893 111.3 49.7 -64.5 -42.2 -2.1 -17.1 13.1 80 80 A K H <5S+ 0 0 134 -4,-1.7 -2,-0.2 1,-0.2 -1,-0.2 0.789 117.6 40.9 -67.6 -29.6 -0.3 -20.0 15.0 81 81 A E H <5S- 0 0 86 -4,-1.9 -1,-0.2 2,-0.2 -2,-0.2 0.565 101.9-138.5 -89.8 -14.4 -0.6 -22.2 11.8 82 82 A A T <5S+ 0 0 51 -4,-0.9 2,-0.3 1,-0.2 -76,-0.2 0.694 70.3 97.9 59.0 27.4 0.2 -19.1 9.6 83 83 A R S > - 0 0 67 0, 0.0 3,-1.1 0, 0.0 4,-0.8 -0.586 32.0-167.5 -66.1 105.7 -12.4 -23.2 7.8 87 87 A W T 34 S+ 0 0 95 -2,-0.8 4,-0.3 1,-0.2 -16,-0.2 0.703 84.9 71.2 -66.5 -22.1 -14.4 -20.4 9.7 88 88 A Q T 34 S+ 0 0 161 1,-0.2 -1,-0.2 2,-0.2 3,-0.2 0.762 94.3 54.7 -62.4 -29.1 -17.4 -22.8 9.2 89 89 A N T <4 S+ 0 0 117 -3,-1.1 -1,-0.2 1,-0.2 -2,-0.2 0.892 116.0 36.4 -67.9 -41.3 -15.7 -25.1 11.8 90 90 A Y S < S+ 0 0 47 -4,-0.8 -19,-1.1 -19,-0.1 -2,-0.2 0.337 90.6 142.5 -93.4 4.8 -15.5 -22.1 14.3 91 91 A S B +D 70 0A 24 -4,-0.3 -21,-0.3 -21,-0.2 -3,-0.1 -0.259 23.7 168.2 -62.1 121.3 -18.9 -20.6 13.2 92 92 A L S S+ 0 0 29 -23,-1.9 -22,-0.2 -2,-0.1 -1,-0.2 0.292 76.2 71.2-106.3 -0.1 -21.1 -19.1 16.0 93 93 A T 0 0 20 -24,-1.5 -23,-0.1 -42,-0.1 -29,-0.1 0.604 360.0 360.0 -83.3 -15.7 -23.4 -17.6 13.3 94 94 A S 0 0 128 -25,-0.3 -2,-0.1 -6,-0.1 -33,-0.1 0.301 360.0 360.0-144.8 360.0 -24.7 -21.1 12.5