==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=3-MAY-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-DEC-12 2M2J . COMPND 2 MOLECULE: PUTATIVE PERIPLASMIC PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SE . AUTHOR S.HOULISTON,A.YEE,A.LEMAK,M.GARCIA,B.WU,A.SAVCHENKO,G.T.MONT . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4821.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 70.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 4.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 26.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 9.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 21.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 21 A H 0 0 223 0, 0.0 2,-0.3 0, 0.0 40,-0.1 0.000 360.0 360.0 360.0 166.7 3.1 0.5 -1.8 2 22 A A - 0 0 61 44,-0.1 36,-0.2 39,-0.1 2,-0.2 -0.952 360.0-101.5-158.5 142.6 2.1 -2.2 -4.3 3 23 A A - 0 0 5 34,-2.2 44,-0.3 -2,-0.3 2,-0.2 -0.467 40.5-118.1 -70.1 138.2 3.8 -3.7 -7.4 4 24 A T E -a 47 0A 93 42,-2.2 44,-1.8 -2,-0.2 2,-0.5 -0.540 24.9-110.6 -78.7 138.8 2.6 -2.4 -10.8 5 25 A E E -a 48 0A 134 -2,-0.2 2,-0.4 42,-0.2 44,-0.2 -0.635 37.8-148.9 -69.1 118.1 1.0 -4.8 -13.3 6 26 A L - 0 0 24 42,-2.6 44,-0.2 -2,-0.5 -1,-0.0 -0.802 7.4-128.0 -99.2 129.9 3.6 -5.1 -16.1 7 27 A T > - 0 0 68 -2,-0.4 4,-2.5 1,-0.1 5,-0.2 -0.361 25.6-110.8 -71.5 154.0 2.5 -5.6 -19.8 8 28 A P H > S+ 0 0 82 0, 0.0 4,-1.3 0, 0.0 -1,-0.1 0.691 118.8 58.5 -60.3 -18.3 4.1 -8.5 -21.9 9 29 A E H > S+ 0 0 162 2,-0.2 4,-0.7 1,-0.1 -3,-0.0 0.953 112.3 35.7 -72.4 -53.6 5.8 -5.8 -24.0 10 30 A Q H 4 S+ 0 0 118 1,-0.2 3,-0.3 2,-0.2 -1,-0.1 0.823 117.3 55.1 -68.2 -33.7 7.6 -4.2 -21.0 11 31 A A H >< S+ 0 0 6 -4,-2.5 3,-1.3 1,-0.2 -1,-0.2 0.855 103.1 55.0 -68.2 -37.3 8.1 -7.7 -19.5 12 32 A A H 3< S+ 0 0 90 -4,-1.3 -1,-0.2 1,-0.3 -2,-0.2 0.712 106.4 52.5 -68.5 -23.3 9.8 -9.0 -22.7 13 33 A A T 3< S+ 0 0 76 -4,-0.7 2,-0.3 -3,-0.3 -1,-0.3 0.329 109.6 60.3 -93.4 4.0 12.3 -6.1 -22.4 14 34 A L S < S- 0 0 90 -3,-1.3 55,-0.0 55,-0.0 0, 0.0 -0.944 72.6-138.0-130.2 152.2 13.2 -7.0 -18.8 15 35 A K - 0 0 193 -2,-0.3 2,-0.1 52,-0.0 -3,-0.1 -0.955 26.8-125.7-108.2 125.0 14.6 -10.2 -17.1 16 36 A P - 0 0 44 0, 0.0 53,-0.2 0, 0.0 3,-0.1 -0.468 8.0-155.7 -68.9 139.0 13.0 -11.3 -13.7 17 37 A Y S S- 0 0 103 51,-1.1 2,-0.3 1,-0.2 52,-0.1 0.706 81.5 -3.2 -79.3 -24.4 15.3 -11.7 -10.7 18 38 A D E -B 68 0A 74 50,-1.0 50,-1.9 2,-0.0 2,-0.3 -0.898 65.0-133.4-156.2 172.5 12.7 -14.1 -9.2 19 39 A R E -B 67 0A 146 -2,-0.3 2,-0.3 48,-0.3 48,-0.3 -0.949 17.5-150.4-143.5 119.9 9.2 -15.6 -9.9 20 40 A I E -B 66 0A 12 46,-1.9 46,-2.5 -2,-0.3 2,-0.4 -0.727 8.0-163.1 -94.7 138.2 6.5 -15.8 -7.2 21 41 A V E +B 65 0A 74 -2,-0.3 2,-0.3 44,-0.2 44,-0.2 -0.987 11.1 175.4-121.6 132.0 3.8 -18.6 -7.2 22 42 A I E -B 64 0A 33 42,-2.2 42,-1.8 -2,-0.4 2,-0.3 -0.822 22.8-130.5-123.5 166.1 0.5 -18.4 -5.2 23 43 A T E -B 63 0A 99 -2,-0.3 2,-0.3 40,-0.3 40,-0.3 -0.936 19.5-177.8-116.5 145.1 -2.6 -20.6 -5.0 24 44 A G E -B 62 0A 10 38,-2.6 2,-1.8 -2,-0.3 38,-1.2 -0.873 20.9-146.7-146.1 108.8 -6.2 -19.4 -5.3 25 45 A R E -B 61 0A 157 -2,-0.3 36,-0.2 36,-0.2 38,-0.1 -0.587 68.8 -64.6 -80.7 79.1 -9.2 -21.7 -4.9 26 46 A F S S+ 0 0 149 -2,-1.8 -1,-0.2 34,-0.6 35,-0.1 0.876 94.2 122.6 44.1 79.6 -11.6 -20.0 -7.4 27 47 A N S S- 0 0 113 1,-0.2 2,-0.3 -3,-0.1 -1,-0.1 0.541 78.1 -42.3-122.4 -65.3 -12.4 -16.5 -6.0 28 48 A A > - 0 0 47 1,-0.1 4,-1.6 0, 0.0 -1,-0.2 -0.934 35.0-127.5-168.1 149.0 -11.3 -14.0 -8.7 29 49 A I H > S+ 0 0 97 -2,-0.3 4,-2.5 1,-0.2 5,-0.2 0.896 116.7 50.7 -66.0 -39.1 -8.4 -13.4 -11.1 30 50 A G H > S+ 0 0 47 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.713 105.5 56.8 -71.0 -24.1 -8.0 -9.8 -9.7 31 51 A D H > S+ 0 0 91 2,-0.2 4,-1.2 3,-0.1 -1,-0.2 0.895 111.6 42.5 -67.8 -44.5 -8.0 -11.3 -6.1 32 52 A A H X S+ 0 0 3 -4,-1.6 4,-1.8 2,-0.2 -2,-0.2 0.909 113.6 50.8 -67.2 -44.8 -5.0 -13.5 -7.2 33 53 A V H X S+ 0 0 23 -4,-2.5 4,-2.1 1,-0.2 -2,-0.2 0.804 107.4 54.8 -66.5 -29.6 -3.4 -10.5 -9.1 34 54 A S H X S+ 0 0 78 -4,-1.4 4,-1.9 2,-0.2 -1,-0.2 0.840 108.1 49.0 -68.9 -35.8 -3.8 -8.4 -5.9 35 55 A A H X S+ 0 0 36 -4,-1.2 4,-2.4 2,-0.2 -2,-0.2 0.819 111.9 48.2 -71.6 -33.9 -1.9 -11.2 -3.9 36 56 A V H X S+ 0 0 1 -4,-1.8 4,-2.3 2,-0.2 5,-0.2 0.858 110.8 51.7 -70.4 -37.5 0.8 -11.1 -6.7 37 57 A S H X S+ 0 0 22 -4,-2.1 -34,-2.2 2,-0.2 4,-1.3 0.884 114.5 43.5 -64.9 -41.9 0.9 -7.2 -6.4 38 58 A R H X S+ 0 0 161 -4,-1.9 4,-2.0 -36,-0.2 -2,-0.2 0.978 116.9 43.5 -64.3 -59.5 1.3 -7.5 -2.6 39 59 A R H X S+ 0 0 105 -4,-2.4 4,-1.2 1,-0.2 -2,-0.2 0.841 111.7 53.4 -63.9 -38.3 3.9 -10.4 -2.6 40 60 A A H <>S+ 0 0 0 -4,-2.3 5,-2.6 2,-0.2 3,-0.3 0.914 111.1 47.4 -61.0 -42.3 6.0 -8.8 -5.4 41 61 A D H ><5S+ 0 0 54 -4,-1.3 3,-0.9 -5,-0.2 -2,-0.2 0.861 109.0 54.0 -65.2 -36.7 6.1 -5.6 -3.4 42 62 A E H 3<5S+ 0 0 84 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.709 107.6 51.1 -71.8 -20.6 7.1 -7.7 -0.3 43 63 A E T 3<5S- 0 0 83 -4,-1.2 -1,-0.2 -3,-0.3 -2,-0.2 0.454 122.5-111.1 -91.0 -4.6 10.0 -9.1 -2.4 44 64 A G T < 5 + 0 0 45 -3,-0.9 27,-0.3 1,-0.3 -3,-0.2 0.528 66.4 150.6 87.1 7.9 11.0 -5.5 -3.3 45 65 A A < - 0 0 3 -5,-2.6 -1,-0.3 -6,-0.2 25,-0.3 -0.520 42.5-151.3 -71.8 137.7 10.0 -5.8 -7.0 46 66 A A S S+ 0 0 39 23,-1.6 -42,-2.2 -2,-0.2 2,-0.2 0.864 79.9 6.6 -71.0 -40.9 8.8 -2.6 -8.8 47 67 A S E -aC 4 69A 19 22,-1.9 22,-2.3 -44,-0.3 2,-0.3 -0.797 63.9-151.3-137.3 172.6 6.5 -4.6 -11.1 48 68 A F E -aC 5 68A 4 -44,-1.8 -42,-2.6 20,-0.2 2,-0.4 -0.951 5.8-148.3-143.1 165.1 5.2 -8.2 -11.8 49 69 A Y E - C 0 67A 67 18,-2.2 18,-2.3 -2,-0.3 2,-0.5 -0.942 18.3-133.2-142.7 112.2 4.0 -10.2 -14.8 50 70 A V E + C 0 66A 41 -2,-0.4 16,-0.3 16,-0.3 3,-0.1 -0.550 27.1 179.6 -63.3 113.3 1.3 -13.0 -14.6 51 71 A V E - 0 0 60 14,-1.9 2,-0.3 -2,-0.5 15,-0.2 0.913 58.5 -17.0 -82.7 -49.0 2.9 -15.9 -16.6 52 72 A D E - C 0 65A 74 13,-1.9 13,-2.2 2,-0.1 2,-0.5 -0.989 43.5-147.4-164.6 143.6 0.2 -18.5 -16.3 53 73 A T E + C 0 64A 70 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.947 37.0 166.4-120.8 104.8 -3.0 -19.4 -14.3 54 74 A S E - C 0 63A 30 9,-1.8 9,-2.1 -2,-0.5 2,-0.2 -0.933 43.8 -97.5-129.1 144.9 -3.2 -23.3 -14.1 55 75 A E E - C 0 62A 121 -2,-0.3 2,-2.0 7,-0.3 7,-0.3 -0.437 39.4-123.7 -63.8 119.8 -5.3 -25.8 -12.1 56 76 A F S S- 0 0 125 5,-2.0 2,-2.0 -2,-0.2 -1,-0.1 -0.472 71.6 -58.5 -71.3 77.3 -3.1 -26.9 -9.1 57 77 A G S S+ 0 0 77 -2,-2.0 2,-0.2 0, 0.0 -1,-0.2 -0.325 130.8 41.7 79.5 -56.0 -3.3 -30.7 -9.9 58 78 A N S S- 0 0 117 -2,-2.0 -2,-0.1 3,-0.3 2,-0.1 -0.719 95.1 -90.0-119.0 167.9 -7.1 -30.8 -9.7 59 79 A S S S+ 0 0 88 -2,-0.2 2,-1.3 1,-0.2 -1,-0.1 -0.325 102.2 28.3 -77.9 159.4 -9.9 -28.4 -10.9 60 80 A G S S+ 0 0 14 -2,-0.1 2,-1.2 1,-0.0 -34,-0.6 -0.378 105.9 77.6 87.0 -55.5 -11.4 -25.5 -8.8 61 81 A N E +B 25 0A 48 -2,-1.3 -5,-2.0 -36,-0.2 -3,-0.3 -0.767 67.1 167.1 -87.4 91.7 -8.1 -25.0 -6.9 62 82 A W E -BC 24 55A 42 -38,-1.2 -38,-2.6 -2,-1.2 2,-0.3 -0.536 20.2-148.2 -95.8 172.9 -6.0 -23.1 -9.5 63 83 A R E -BC 23 54A 65 -9,-2.1 -9,-1.8 -40,-0.3 2,-0.5 -0.960 7.6-132.9-142.6 154.8 -2.7 -21.3 -8.9 64 84 A V E -BC 22 53A 0 -42,-1.8 -42,-2.2 -2,-0.3 2,-0.5 -0.959 11.7-165.5-119.2 111.8 -0.9 -18.2 -10.4 65 85 A V E +BC 21 52A 5 -13,-2.2 -13,-1.9 -2,-0.5 -14,-1.9 -0.862 21.8 172.1 -90.3 128.8 2.7 -18.3 -11.4 66 86 A A E -BC 20 50A 0 -46,-2.5 -46,-1.9 -2,-0.5 -16,-0.3 -0.992 28.7-128.7-145.6 131.8 4.0 -14.7 -12.0 67 87 A D E -BC 19 49A 27 -18,-2.3 -18,-2.2 -2,-0.3 2,-0.3 -0.341 20.6-147.0 -70.1 158.0 7.5 -13.2 -12.6 68 88 A V E -BC 18 48A 0 -50,-1.9 -51,-1.1 -20,-0.2 -50,-1.0 -0.995 10.3-160.5-132.9 139.3 8.7 -10.2 -10.5 69 89 A Y E - C 0 47A 9 -22,-2.3 -22,-1.9 -2,-0.3 -23,-1.6 -0.958 8.9-135.9-127.8 136.5 11.0 -7.3 -11.8 70 90 A K 0 0 120 -2,-0.4 -25,-0.1 -25,-0.3 -26,-0.0 -0.282 360.0 360.0 -80.8 167.7 13.2 -4.8 -9.9 71 91 A A 0 0 140 -27,-0.3 -1,-0.1 -2,-0.1 -26,-0.1 0.755 360.0 360.0 -98.0 360.0 13.6 -1.0 -10.5