==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-AUG-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PEPTIDE BINDING PROTEIN/PROTEIN BINDING 23-JAN-13 2M3O . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE NEDD4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR R.BOBBY,K.MEDINI,P.NEUDECKER,V.LEE,F.J.MACDONALD,M.A.BRIMBLE . 54 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4444.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 21 38.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 18.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 416 W G 0 0 95 0, 0.0 2,-0.3 0, 0.0 37,-0.0 0.000 360.0 360.0 360.0-142.4 -9.5 1.5 -1.4 2 417 W S + 0 0 109 1,-0.1 0, 0.0 2,-0.0 0, 0.0 -0.506 360.0 150.1 -68.7 128.5 -11.1 0.5 -4.7 3 418 W M + 0 0 91 -2,-0.3 3,-0.2 36,-0.1 -1,-0.1 0.500 3.4 149.7-119.3 -94.3 -11.3 -3.3 -5.0 4 419 W E > - 0 0 161 1,-0.2 3,-0.7 2,-0.1 2,-0.4 0.965 53.7-119.8 52.2 78.9 -14.2 -4.8 -7.0 5 420 W Q T 3 S+ 0 0 118 1,-0.2 -1,-0.2 3,-0.0 3,-0.1 -0.279 83.4 98.0 -47.2 101.3 -12.8 -8.1 -8.4 6 421 W G T 3 S+ 0 0 56 1,-0.6 2,-0.4 -2,-0.4 -1,-0.2 0.284 77.3 42.0-155.0 -46.2 -13.2 -7.4 -12.1 7 422 W F S < S- 0 0 174 -3,-0.7 -1,-0.6 6,-0.0 6,-0.1 -0.939 73.0-156.3-113.6 137.4 -9.9 -6.3 -13.4 8 423 W L - 0 0 41 -2,-0.4 3,-0.1 4,-0.2 6,-0.1 -0.772 19.1-103.4-114.4 157.7 -6.7 -8.0 -12.2 9 424 W P > - 0 0 53 0, 0.0 3,-2.1 0, 0.0 -1,-0.1 -0.107 60.2 -61.6 -68.4 172.0 -3.0 -7.0 -12.0 10 425 W K T 3 S+ 0 0 174 1,-0.3 18,-0.1 16,-0.0 3,-0.1 -0.300 126.0 12.8 -57.8 135.9 -0.3 -8.1 -14.5 11 426 W G T 3 S+ 0 0 19 1,-0.2 16,-3.5 -3,-0.1 2,-0.5 0.368 102.5 117.5 77.6 -5.3 0.2 -11.8 -14.4 12 427 W W E < +A 26 0A 72 -3,-2.1 2,-0.3 14,-0.2 14,-0.2 -0.846 39.0 177.7-102.9 124.8 -3.0 -12.3 -12.4 13 428 W E E -A 25 0A 94 12,-2.8 12,-2.7 -2,-0.5 2,-0.4 -0.748 15.8-146.0-114.5 165.4 -5.8 -14.3 -13.9 14 429 W V E +A 24 0A 59 10,-0.3 2,-0.3 -2,-0.3 10,-0.2 -1.000 20.8 169.3-135.7 136.0 -9.2 -15.2 -12.5 15 430 W R E -A 23 0A 118 8,-3.3 8,-3.1 -2,-0.4 2,-0.4 -0.876 32.0-108.5-138.1 170.1 -11.2 -18.4 -13.1 16 431 W H E -A 22 0A 135 -2,-0.3 5,-0.1 6,-0.3 -2,-0.0 -0.876 25.6-140.2-106.8 133.8 -14.2 -20.2 -11.8 17 432 W A > - 0 0 8 4,-3.0 3,-2.7 -2,-0.4 0, 0.0 -0.549 28.5-110.3 -85.7 155.7 -14.0 -23.4 -9.8 18 433 W P T 3 S+ 0 0 127 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.745 119.9 64.1 -56.1 -23.6 -16.5 -26.3 -10.3 19 434 W N T 3 S- 0 0 121 2,-0.2 -3,-0.0 1,-0.1 0, 0.0 0.627 120.9-110.4 -74.9 -14.5 -17.8 -25.4 -6.9 20 435 W G S < S+ 0 0 48 -3,-2.7 -1,-0.1 1,-0.4 0, 0.0 0.134 80.3 121.4 107.0 -19.5 -18.9 -22.1 -8.3 21 436 W R - 0 0 185 -5,-0.1 -4,-3.0 1,-0.1 -1,-0.4 -0.558 61.4-123.7 -81.0 140.2 -16.3 -20.0 -6.4 22 437 W P E -A 16 0A 31 0, 0.0 2,-0.3 0, 0.0 -6,-0.3 -0.624 27.0-169.5 -83.2 140.2 -13.9 -17.8 -8.4 23 438 W F E -A 15 0A 0 -8,-3.1 -8,-3.3 -2,-0.3 2,-0.3 -0.962 18.1-124.2-131.1 149.7 -10.1 -18.2 -7.8 24 439 W F E -AB 14 33A 4 9,-3.2 9,-2.9 -2,-0.3 2,-0.5 -0.722 17.0-155.2 -96.9 141.7 -7.2 -16.2 -9.0 25 440 W I E -AB 13 32A 3 -12,-2.7 -12,-2.8 -2,-0.3 2,-0.8 -0.957 5.0-150.9-121.5 114.2 -4.3 -17.7 -11.0 26 441 W D E >> -AB 12 31A 8 5,-3.3 4,-1.1 -2,-0.5 5,-0.8 -0.757 4.6-166.6 -89.0 109.7 -0.9 -16.1 -10.9 27 442 W H T 45S+ 0 0 55 -16,-3.5 -1,-0.2 -2,-0.8 -15,-0.1 0.735 81.7 67.3 -61.8 -24.6 1.0 -16.7 -14.2 28 443 W N T 45S+ 0 0 98 -17,-0.5 -1,-0.2 1,-0.2 -16,-0.1 0.967 120.8 9.5 -66.6 -56.9 4.2 -15.5 -12.5 29 444 W T T 45S- 0 0 100 2,-0.1 -1,-0.2 -3,-0.1 -2,-0.2 0.251 101.0-115.6-111.2 11.3 4.8 -18.3 -10.0 30 445 W K T <5 + 0 0 130 -4,-1.1 21,-0.4 1,-0.2 2,-0.3 0.769 67.9 142.9 64.0 29.1 2.1 -20.7 -11.2 31 446 W T E < -B 26 0A 69 -5,-0.8 -5,-3.3 19,-0.1 2,-0.3 -0.723 39.7-148.9-104.7 151.2 0.1 -20.3 -8.0 32 447 W T E -B 25 0A 34 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.897 16.0-177.7-116.0 146.9 -3.6 -20.2 -7.4 33 448 W T E -B 24 0A 40 -9,-2.9 -9,-3.2 -2,-0.3 -2,-0.0 -0.992 31.6-155.6-145.4 151.0 -5.4 -18.3 -4.6 34 449 W W S S+ 0 0 110 -2,-0.3 2,-0.2 -11,-0.2 -1,-0.1 0.505 74.9 95.3 -97.1 -9.4 -8.9 -17.8 -3.3 35 450 W E S S- 0 0 105 -11,-0.1 -11,-0.2 1,-0.1 -2,-0.1 -0.507 80.4-116.5 -85.7 151.7 -7.9 -14.5 -1.8 36 451 W D - 0 0 12 -2,-0.2 4,-0.3 1,-0.1 3,-0.1 -0.780 16.0-162.4 -94.9 123.5 -8.4 -11.2 -3.5 37 452 W P S S+ 0 0 29 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.493 86.6 59.0 -81.7 -4.9 -5.2 -9.3 -4.3 38 453 W R S S+ 0 0 100 1,-0.1 -2,-0.0 3,-0.1 -30,-0.0 0.785 99.4 53.0 -93.7 -32.5 -7.0 -5.9 -4.8 39 454 W L S S+ 0 0 95 -3,-0.1 2,-0.5 1,-0.1 -1,-0.1 0.576 107.9 63.0 -78.1 -8.5 -8.5 -5.6 -1.3 40 455 W K S S- 0 0 107 -4,-0.3 -1,-0.1 -37,-0.0 0, 0.0 -0.977 83.4-144.0-115.8 128.8 -5.0 -6.2 0.0 41 456 W I - 0 0 132 -2,-0.5 2,-0.5 2,-0.0 -3,-0.1 -0.830 3.6-145.4-104.3 114.2 -2.5 -3.5 -0.9 42 457 W P 0 0 120 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.648 360.0 360.0 -74.4 118.6 1.1 -4.6 -1.6 43 458 W A 0 0 141 -2,-0.5 -2,-0.0 0, 0.0 0, 0.0 -0.974 360.0 360.0-162.1 360.0 3.4 -1.8 -0.3 44 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 45 638 P T 0 0 197 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -22.3 -12.4 -27.2 1.4 46 639 P A - 0 0 42 0, 0.0 -27,-0.0 0, 0.0 0, 0.0 -0.942 360.0-120.2-124.7 144.8 -10.9 -28.1 -2.0 47 640 P P - 0 0 114 0, 0.0 3,-0.1 0, 0.0 -14,-0.0 -0.509 32.8-109.9 -80.2 151.0 -7.8 -26.7 -3.8 48 641 P P - 0 0 22 0, 0.0 -16,-0.1 0, 0.0 -31,-0.0 -0.502 39.6 -91.6 -81.2 150.3 -8.1 -25.0 -7.2 49 642 P P - 0 0 43 0, 0.0 5,-0.1 0, 0.0 0, 0.0 -0.306 46.8-109.5 -60.0 140.3 -6.8 -26.6 -10.5 50 643 P A > - 0 0 43 1,-0.1 4,-2.1 -3,-0.1 3,-0.3 -0.195 25.8-107.8 -68.5 163.9 -3.3 -25.7 -11.4 51 644 P Y H > S+ 0 0 82 -21,-0.4 4,-0.6 1,-0.3 -1,-0.1 0.876 123.6 45.4 -61.2 -39.7 -2.4 -23.4 -14.3 52 645 P A H 4 S+ 0 0 87 1,-0.2 -1,-0.3 2,-0.2 -2,-0.0 0.706 111.1 56.3 -76.0 -20.3 -1.1 -26.4 -16.4 53 646 P T H 4 S+ 0 0 105 -3,-0.3 -2,-0.2 1,-0.2 -1,-0.2 0.845 110.7 41.1 -78.2 -37.0 -4.2 -28.3 -15.3 54 647 P L H < 0 0 35 -4,-2.1 -2,-0.2 -5,-0.1 -1,-0.2 0.507 360.0 360.0 -90.7 -6.3 -6.7 -25.8 -16.6 55 648 P G < 0 0 93 -4,-0.6 -5,-0.0 -5,-0.2 0, 0.0 -0.707 360.0 360.0-105.3 360.0 -4.6 -25.2 -19.8