==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 02-JUL-02 1M4E . COMPND 2 MOLECULE: HEPCIDIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR H.N.HUNTER,D.B.FULTON,T.GANZ,H.J.VOGEL . 20 1 3 3 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2062.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 10 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 25.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 25.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A I 0 0 209 0, 0.0 16,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 140.1 3.1 -10.4 2.2 2 2 A a - 0 0 40 1,-0.1 2,-1.3 14,-0.1 16,-0.3 -0.271 360.0 -99.8 -59.7 141.9 3.2 -6.6 1.9 3 3 A I E -A 17 0A 117 14,-1.8 14,-0.9 13,-0.2 2,-0.3 -0.511 38.1-130.0 -70.0 96.4 -0.0 -4.9 3.1 4 4 A F E -A 16 0A 130 -2,-1.3 2,-1.5 12,-0.3 12,-0.3 -0.267 17.8-154.9 -50.3 106.1 -1.8 -4.2 -0.1 5 5 A b E -A 15 0A 12 10,-2.4 2,-2.4 -2,-0.3 10,-0.8 -0.635 14.7-178.9 -89.5 80.1 -2.7 -0.5 0.3 6 6 A c E S-A 14 0A 71 -2,-1.5 8,-0.3 8,-0.3 -1,-0.1 -0.348 74.4 -63.3 -78.4 60.4 -5.7 -0.3 -2.1 7 7 A G S S+ 0 0 35 -2,-2.4 -1,-0.2 6,-0.6 5,-0.1 0.888 98.9 135.1 62.3 41.5 -6.1 3.4 -1.4 8 8 A C S S- 0 0 84 3,-0.2 4,-0.1 0, 0.0 -3,-0.1 0.910 85.5 -24.7 -80.7 -53.1 -6.9 2.9 2.3 9 9 A C S S+ 0 0 100 2,-0.2 3,-0.1 3,-0.0 -4,-0.0 0.593 127.9 43.2-129.3 -56.3 -4.8 5.6 3.8 10 10 A H S S- 0 0 137 1,-0.2 -4,-0.0 2,-0.1 0, 0.0 0.514 112.1 -3.7 -73.3-138.0 -1.8 6.6 1.6 11 11 A R - 0 0 205 1,-0.1 -4,-0.5 2,-0.1 -2,-0.2 -0.222 65.9-125.6 -56.4 143.6 -2.0 7.1 -2.2 12 12 A S S S+ 0 0 86 -5,-0.1 -1,-0.1 -3,-0.1 2,-0.1 0.853 88.3 95.6 -59.1 -35.1 -5.4 6.4 -3.8 13 13 A K S S- 0 0 158 1,-0.1 -6,-0.6 -7,-0.1 2,-0.2 -0.379 85.1-118.5 -61.3 128.0 -3.6 4.0 -6.2 14 14 A c E +A 6 0A 65 -8,-0.3 -8,-0.3 -2,-0.1 2,-0.2 -0.481 50.8 143.5 -71.5 135.0 -3.7 0.4 -4.9 15 15 A G E -A 5 0A 28 -10,-0.8 -10,-2.4 -2,-0.2 -8,-0.1 -0.831 52.9 -94.8-174.8 133.6 -0.4 -1.2 -4.1 16 16 A M E -A 4 0A 129 -12,-0.3 2,-0.8 -2,-0.2 -12,-0.3 -0.188 35.5-138.3 -51.5 137.2 1.2 -3.5 -1.6 17 17 A b E -A 3 0A 16 -14,-0.9 -14,-1.8 -16,-0.1 2,-1.2 -0.866 16.5-172.7-106.4 103.6 2.9 -1.7 1.3 18 18 A a + 0 0 81 -2,-0.8 2,-0.5 -16,-0.3 -16,-0.1 -0.379 37.7 136.9 -90.1 55.1 6.3 -3.3 2.1 19 19 A K 0 0 150 -2,-1.2 -16,-0.2 1,-0.1 -2,-0.1 -0.904 360.0 360.0-109.1 129.3 6.8 -1.2 5.2 20 20 A T 0 0 209 -2,-0.5 -1,-0.1 0, 0.0 -2,-0.0 0.594 360.0 360.0 -67.6 360.0 8.1 -2.7 8.5