==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JUL-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 11-MAR-13 2M5V . COMPND 2 MOLECULE: NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 10; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.Y.SU,C.F.CHANG,C.I.CHANG . 102 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7240.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 68.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 15 14.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 47 46.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 7 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 2 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 123 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 136.7 2.1 0.0 -1.2 2 2 A A + 0 0 92 1,-0.1 0, 0.0 2,-0.1 0, 0.0 0.317 360.0 43.2 64.1 158.4 3.7 3.0 -2.9 3 3 A M + 0 0 186 1,-0.0 -1,-0.1 2,-0.0 0, 0.0 -0.042 63.5 103.0 64.7-173.3 4.1 6.4 -1.2 4 4 A A - 0 0 97 1,-0.2 2,-0.7 -3,-0.1 -2,-0.1 0.865 50.9-151.4 64.2 107.7 5.3 6.8 2.4 5 5 A M + 0 0 194 2,-0.0 2,-0.4 0, 0.0 -1,-0.2 -0.695 41.8 135.3-111.7 78.1 8.9 7.8 2.7 6 6 A A - 0 0 70 -2,-0.7 3,-0.1 3,-0.0 0, 0.0 -0.988 45.8-132.9-129.8 127.2 10.1 6.4 6.0 7 7 A K - 0 0 191 -2,-0.4 -2,-0.0 1,-0.2 2,-0.0 -0.003 49.1 -62.9 -64.9 177.1 13.3 4.5 6.7 8 8 A A - 0 0 97 1,-0.1 2,-0.2 0, 0.0 -1,-0.2 -0.307 57.3-163.0 -64.1 146.2 13.6 1.2 8.6 9 9 A R - 0 0 161 -3,-0.1 -1,-0.1 86,-0.1 -3,-0.0 -0.635 24.0 -91.3-122.5-179.2 12.5 1.3 12.2 10 10 A K > - 0 0 96 -2,-0.2 4,-0.6 1,-0.2 85,-0.0 -0.853 22.1-162.9-101.8 126.7 12.9 -0.9 15.3 11 11 A P H >> S+ 0 0 54 0, 0.0 4,-1.2 0, 0.0 3,-0.6 0.945 91.3 48.2 -69.8 -50.8 10.2 -3.6 16.1 12 12 A R H >> S+ 0 0 146 1,-0.3 4,-1.3 2,-0.2 3,-0.7 0.921 112.4 49.1 -56.9 -47.0 11.1 -4.1 19.7 13 13 A E H 3> S+ 0 0 124 1,-0.2 4,-2.1 2,-0.2 -1,-0.3 0.720 102.9 65.1 -66.0 -20.5 11.1 -0.4 20.4 14 14 A A H X S+ 0 0 4 -4,-1.9 3,-1.4 2,-0.2 4,-0.6 0.972 110.2 49.3 -73.8 -58.1 3.1 1.5 21.5 19 19 A L H 3< S+ 0 0 3 -4,-2.7 3,-0.3 1,-0.3 8,-0.2 0.771 116.4 47.0 -52.9 -26.0 2.1 -0.2 24.7 20 20 A S H 3< S+ 0 0 49 -4,-0.8 -1,-0.3 -5,-0.2 -2,-0.2 0.663 95.8 72.3 -89.5 -19.3 3.0 3.2 26.4 21 21 A D H << S+ 0 0 61 -3,-1.4 2,-0.3 -4,-0.6 -1,-0.2 0.595 95.2 67.3 -70.8 -9.8 1.0 5.2 23.8 22 22 A L S < S- 0 0 10 -4,-0.6 2,-0.0 -3,-0.3 63,-0.0 -0.787 95.9 -96.2-112.3 156.2 -2.1 3.8 25.5 23 23 A E >> - 0 0 121 -2,-0.3 3,-2.4 1,-0.1 4,-1.9 -0.348 29.9-120.3 -68.5 148.5 -3.5 4.5 29.0 24 24 A E H 3> S+ 0 0 44 1,-0.3 4,-1.7 2,-0.2 5,-0.3 0.828 115.4 62.0 -57.4 -32.6 -2.7 2.0 31.8 25 25 A N H 34 S+ 0 0 72 1,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.437 110.1 42.9 -74.1 2.3 -6.4 1.4 32.1 26 26 A D H <> S+ 0 0 15 -3,-2.4 4,-1.7 3,-0.1 -2,-0.2 0.777 112.5 43.9-110.4 -57.1 -6.3 0.1 28.5 27 27 A F H X S+ 0 0 7 -4,-1.9 4,-2.5 1,-0.2 5,-0.2 0.856 116.2 51.4 -59.6 -36.0 -3.2 -2.1 28.2 28 28 A K H X S+ 0 0 20 -4,-1.7 4,-2.5 -5,-0.3 -1,-0.2 0.901 103.5 57.4 -68.4 -42.0 -4.1 -3.7 31.5 29 29 A K H > S+ 0 0 126 -5,-0.3 4,-1.3 2,-0.2 5,-0.3 0.905 113.8 39.2 -55.3 -44.6 -7.7 -4.4 30.4 30 30 A L H X>S+ 0 0 11 -4,-1.7 4,-2.8 2,-0.2 5,-0.7 0.962 116.7 47.6 -70.9 -53.8 -6.4 -6.4 27.4 31 31 A K H <>S+ 0 0 10 -4,-2.5 5,-0.7 3,-0.2 -2,-0.2 0.782 106.9 62.3 -58.3 -26.8 -3.5 -8.1 29.2 32 32 A F H <5S+ 0 0 112 -4,-2.5 -1,-0.2 -5,-0.2 -2,-0.2 0.929 124.8 12.5 -65.3 -46.8 -5.9 -8.9 32.0 33 33 A Y H X5S+ 0 0 140 -4,-1.3 4,-2.1 -3,-0.5 5,-0.3 0.883 133.0 46.4 -95.4 -55.3 -8.1 -11.1 29.8 34 34 A L H X>S+ 0 0 16 -4,-2.8 4,-2.3 -5,-0.3 5,-0.6 0.958 121.1 38.4 -52.5 -58.4 -6.0 -11.6 26.6 35 35 A R H > - 0 0 28 -3,-0.2 3,-1.4 -23,-0.1 4,-0.2 -0.726 29.6-175.6-158.5 102.1 -1.6 -2.5 39.1 48 48 A R G >> S+ 0 0 184 1,-0.3 4,-1.5 -2,-0.2 3,-0.8 0.660 87.4 67.9 -71.2 -15.6 -2.3 0.6 37.0 49 49 A G G 34>S+ 0 0 23 1,-0.2 5,-3.3 3,-0.2 -1,-0.3 0.558 74.5 86.5 -80.6 -7.7 1.2 1.7 38.0 50 50 A E G <45S+ 0 0 43 -3,-1.4 -1,-0.2 3,-0.2 9,-0.2 0.781 109.8 18.0 -61.9 -26.8 2.7 -1.1 35.8 51 51 A L T <45S+ 0 0 18 -3,-0.8 -2,-0.2 -4,-0.2 -1,-0.2 0.744 134.9 39.6-111.0 -43.3 2.5 1.3 32.9 52 52 A E T <5S+ 0 0 124 -4,-1.5 -3,-0.2 3,-0.1 -2,-0.1 0.964 128.6 29.4 -73.2 -55.2 2.1 4.7 34.5 53 53 A G T 5S+ 0 0 47 -5,-0.2 -3,-0.2 -4,-0.1 -4,-0.1 0.979 124.8 42.1 -69.7 -58.2 4.6 4.3 37.3 54 54 A L S - 0 0 96 1,-0.1 4,-2.3 -5,-0.0 3,-0.3 -0.818 12.4-126.0-120.3 160.4 8.3 1.9 32.2 56 56 A P H > S+ 0 0 27 0, 0.0 4,-3.2 0, 0.0 5,-0.4 0.888 109.9 57.5 -69.8 -41.1 7.4 0.0 29.0 57 57 A V H > S+ 0 0 78 1,-0.2 4,-0.5 3,-0.2 -41,-0.1 0.700 113.3 43.2 -63.7 -18.5 11.0 -1.2 28.3 58 58 A D H > S+ 0 0 74 -3,-0.3 4,-1.2 2,-0.1 -1,-0.2 0.886 119.6 37.4 -92.0 -50.6 10.8 -2.8 31.8 59 59 A L H X S+ 0 0 19 -4,-2.3 4,-1.8 -9,-0.2 -2,-0.2 0.844 120.1 49.7 -70.7 -34.3 7.3 -4.4 31.7 60 60 A A H X S+ 0 0 4 -4,-3.2 4,-2.9 -5,-0.2 5,-0.3 0.936 106.4 53.3 -69.7 -48.2 7.7 -5.3 28.0 61 61 A E H X S+ 0 0 108 -4,-0.5 4,-1.0 -5,-0.4 -1,-0.2 0.838 112.1 47.5 -56.1 -34.2 11.1 -6.9 28.4 62 62 A L H X S+ 0 0 79 -4,-1.2 4,-1.7 2,-0.2 -1,-0.2 0.878 111.3 49.7 -75.1 -39.6 9.5 -9.1 31.1 63 63 A L H X>S+ 0 0 10 -4,-1.8 4,-1.4 2,-0.2 5,-0.8 0.940 109.5 50.2 -64.6 -48.7 6.4 -10.0 29.0 64 64 A I H <5S+ 0 0 61 -4,-2.9 -1,-0.2 1,-0.2 6,-0.2 0.837 114.2 46.3 -59.0 -33.7 8.5 -11.0 26.0 65 65 A S H <5S+ 0 0 98 -4,-1.0 -1,-0.2 -5,-0.3 -2,-0.2 0.771 102.5 67.4 -79.6 -27.6 10.6 -13.2 28.3 66 66 A K H <5S- 0 0 60 -4,-1.7 -2,-0.2 -3,-0.2 -3,-0.1 0.981 134.6 -18.4 -55.4 -64.6 7.5 -14.6 30.0 67 67 A Y T <5S- 0 0 145 -4,-1.4 2,-0.2 1,-0.2 -3,-0.2 0.709 121.3 -53.5-113.8 -39.9 6.1 -16.5 27.0 68 68 A G >< - 0 0 22 -5,-0.8 4,-1.5 2,-0.1 -1,-0.2 -0.716 32.3-114.4 162.6 146.3 7.9 -14.9 24.0 69 69 A E H > S+ 0 0 103 -2,-0.2 4,-1.4 -5,-0.2 5,-0.2 0.756 111.1 60.4 -66.5 -24.3 8.7 -11.6 22.3 70 70 A K H >> S+ 0 0 120 -6,-0.2 4,-1.5 2,-0.2 3,-0.6 0.990 112.3 28.9 -65.5 -81.4 6.6 -12.9 19.3 71 71 A E H 3> S+ 0 0 87 1,-0.2 4,-3.1 2,-0.2 5,-0.2 0.785 112.4 74.9 -51.3 -28.1 3.1 -13.5 20.7 72 72 A A H 3X S+ 0 0 3 -4,-1.5 4,-0.8 2,-0.2 3,-0.3 0.960 99.5 38.1 -49.1 -64.2 4.0 -10.7 23.2 73 73 A V H XX S+ 0 0 18 -4,-1.4 4,-1.8 -3,-0.6 3,-1.0 0.888 116.2 54.4 -56.2 -41.6 3.6 -7.9 20.7 74 74 A K H 3X S+ 0 0 37 -4,-1.5 4,-3.0 1,-0.3 5,-0.4 0.876 100.2 60.0 -61.1 -38.6 0.6 -9.6 19.2 75 75 A V H 3X S+ 0 0 3 -4,-3.1 4,-0.8 -3,-0.3 -1,-0.3 0.752 106.1 50.3 -61.6 -23.7 -1.1 -9.8 22.6 76 76 A V H X>S+ 0 0 1 -4,-1.3 5,-1.8 1,-0.2 3,-1.2 0.800 93.5 67.7 -74.1 -29.7 -5.9 -3.4 21.5 81 81 A K H ><5S+ 0 0 110 -4,-2.6 3,-2.7 1,-0.3 5,-0.2 0.963 97.1 49.9 -53.6 -58.7 -8.2 -3.9 18.5 82 82 A V T 3<5S+ 0 0 135 -4,-0.7 -1,-0.3 1,-0.3 -2,-0.2 0.594 109.8 56.6 -58.3 -8.0 -11.3 -4.6 20.6 83 83 A M T <45S- 0 0 57 -3,-1.2 -1,-0.3 -4,-0.1 -2,-0.2 0.569 111.5-122.3 -98.6 -13.5 -10.3 -1.4 22.3 84 84 A N T <<5 + 0 0 130 -3,-2.7 3,-0.4 -4,-0.6 -3,-0.2 0.823 64.2 142.6 74.9 32.5 -10.2 0.7 19.1 85 85 A L >< + 0 0 25 -5,-1.8 4,-1.8 1,-0.2 3,-0.3 -0.002 20.6 125.1 -92.8 28.9 -6.6 1.7 19.7 86 86 A L H > + 0 0 92 -5,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.630 53.5 86.1 -62.2 -11.7 -6.0 1.5 15.9 87 87 A E H 4 S+ 0 0 136 -3,-0.4 3,-0.4 2,-0.2 4,-0.3 0.980 109.6 9.1 -51.8 -75.1 -4.7 5.0 16.3 88 88 A L H >> S+ 0 0 41 -3,-0.3 4,-1.3 1,-0.2 3,-1.1 0.803 122.7 70.0 -78.0 -30.8 -1.1 4.3 17.2 89 89 A V H 3X S+ 0 0 9 -4,-1.8 4,-3.0 1,-0.3 5,-0.4 0.769 78.2 84.2 -57.5 -25.5 -1.4 0.6 16.5 90 90 A D H 3X S+ 0 0 107 -4,-1.4 4,-1.2 -3,-0.4 -1,-0.3 0.904 105.5 23.6 -42.6 -54.2 -1.6 1.6 12.8 91 91 A Q H <> S+ 0 0 95 -3,-1.1 4,-1.2 -4,-0.3 5,-0.3 0.968 117.6 59.8 -78.5 -60.4 2.2 1.7 12.6 92 92 A L H >X S+ 0 0 5 -4,-1.3 4,-1.1 1,-0.3 3,-0.8 0.843 110.3 46.2 -34.1 -49.7 3.1 -0.7 15.5 93 93 A S H ><>S+ 0 0 7 -4,-3.0 5,-1.0 1,-0.3 3,-0.8 0.943 112.2 48.1 -62.3 -49.8 1.1 -3.4 13.7 94 94 A H H 3<5S+ 0 0 169 -4,-1.2 -1,-0.3 -5,-0.4 -2,-0.2 0.493 116.0 48.4 -70.2 -1.4 2.7 -2.6 10.3 95 95 A I H <<5S+ 0 0 53 -4,-1.2 -1,-0.2 -3,-0.8 -2,-0.2 0.548 113.0 43.7-111.7 -15.9 6.0 -2.6 12.1 96 96 A C T <<5S- 0 0 22 -4,-1.1 -2,-0.2 -3,-0.8 -3,-0.1 0.181 121.3 -98.1-113.4 13.4 5.5 -5.9 14.0 97 97 A L T > 5 - 0 0 86 -4,-0.4 3,-2.1 -5,-0.1 4,-0.3 0.998 36.5-164.1 66.9 75.5 4.1 -7.8 11.0 98 98 A H G >