==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAY-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION 16-APR-13 2M71 . COMPND 2 MOLECULE: TRANSLATION INITIATION FACTOR IF-3; . SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; . AUTHOR R.HARRIS,M.AHMED,J.ATTONITO,J.B.BONANNO,S.CHAMALA,S.CHOWDHUR . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6785.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 72.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 8 8.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 14.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 11.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 27.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 4 A K 0 0 252 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 137.1 -10.8 -44.4 16.4 2 5 A V + 0 0 142 2,-0.1 2,-0.9 1,-0.0 0, 0.0 0.676 360.0 88.9 -87.6 -18.8 -11.5 -48.0 17.2 3 6 A I - 0 0 103 31,-0.0 2,-0.5 2,-0.0 31,-0.1 -0.709 67.3-159.1 -85.2 108.6 -9.6 -47.7 20.5 4 7 A D - 0 0 75 -2,-0.9 31,-0.7 2,-0.0 2,-0.5 -0.778 8.1-162.4 -91.1 128.0 -12.1 -46.6 23.1 5 8 A I E -a 35 0A 78 -2,-0.5 2,-0.5 29,-0.2 31,-0.2 -0.937 9.1-146.4-119.4 132.2 -10.4 -45.1 26.1 6 9 A K E -a 36 0A 69 29,-2.5 31,-2.9 -2,-0.5 2,-0.8 -0.821 6.8-154.1 -97.5 130.6 -12.0 -44.6 29.5 7 10 A E E -a 37 0A 90 -2,-0.5 2,-0.5 29,-0.2 31,-0.2 -0.847 11.7-167.0-107.8 97.6 -10.9 -41.5 31.4 8 11 A I E -a 38 0A 28 -2,-0.8 31,-2.0 29,-0.8 2,-0.3 -0.738 10.2-148.5 -88.7 125.1 -11.3 -42.2 35.1 9 12 A K E +a 39 0A 108 -2,-0.5 2,-0.3 29,-0.2 31,-0.2 -0.679 18.8 173.6 -97.0 145.9 -11.2 -39.0 37.3 10 13 A L E -a 40 0A 4 29,-2.4 31,-1.2 -2,-0.3 2,-0.3 -0.829 17.0-138.9-135.7 176.9 -9.9 -38.7 40.9 11 14 A S E -a 41 0A 39 -2,-0.3 3,-0.3 29,-0.2 31,-0.1 -0.961 24.0-119.7-139.1 156.2 -9.2 -35.9 43.3 12 15 A V S S+ 0 0 40 29,-0.6 2,-1.3 -2,-0.3 -1,-0.1 0.913 115.6 50.9 -60.9 -42.9 -6.5 -35.0 45.8 13 16 A K S S+ 0 0 142 -3,-0.1 2,-0.3 2,-0.0 -1,-0.3 -0.677 88.1 136.0 -95.3 76.5 -9.1 -35.1 48.6 14 17 A I - 0 0 35 -2,-1.3 2,-0.2 -3,-0.3 -4,-0.0 -0.936 57.3-110.0-125.4 148.5 -10.6 -38.5 47.7 15 18 A A > - 0 0 62 -2,-0.3 4,-1.7 1,-0.1 3,-0.2 -0.549 20.4-133.6 -74.6 142.1 -11.6 -41.4 49.8 16 19 A Q H > S+ 0 0 64 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.843 107.6 59.4 -64.5 -33.7 -9.4 -44.6 49.6 17 20 A N H > S+ 0 0 131 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.896 105.0 49.2 -60.5 -40.7 -12.5 -46.7 49.2 18 21 A D H > S+ 0 0 59 -3,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.884 110.8 50.1 -66.6 -39.1 -13.4 -44.7 46.1 19 22 A I H X S+ 0 0 5 -4,-1.7 4,-2.4 2,-0.2 -2,-0.2 0.927 110.2 50.5 -62.9 -45.7 -9.8 -45.2 44.7 20 23 A N H X S+ 0 0 65 -4,-2.8 4,-1.2 1,-0.2 -2,-0.2 0.878 110.3 49.1 -61.1 -42.5 -10.1 -48.9 45.4 21 24 A Y H X S+ 0 0 140 -4,-2.1 4,-1.4 -5,-0.2 -1,-0.2 0.914 110.9 50.5 -63.1 -44.3 -13.4 -49.2 43.6 22 25 A K H X S+ 0 0 49 -4,-2.1 4,-2.4 1,-0.2 -2,-0.2 0.883 105.8 53.8 -64.9 -41.6 -12.0 -47.2 40.6 23 26 A V H X S+ 0 0 11 -4,-2.4 4,-2.5 1,-0.2 -1,-0.2 0.821 102.6 61.2 -63.8 -28.8 -8.9 -49.4 40.1 24 27 A K H X S+ 0 0 106 -4,-1.2 4,-1.8 -5,-0.2 -1,-0.2 0.954 109.8 39.0 -60.1 -49.8 -11.2 -52.4 40.0 25 28 A H H X S+ 0 0 57 -4,-1.4 4,-2.5 2,-0.2 5,-0.3 0.872 111.1 59.8 -68.3 -36.8 -13.0 -51.0 37.0 26 29 A A H X S+ 0 0 0 -4,-2.4 4,-1.8 1,-0.2 -2,-0.2 0.923 107.1 46.6 -56.4 -45.6 -9.7 -49.8 35.6 27 30 A L H X S+ 0 0 30 -4,-2.5 4,-2.2 1,-0.2 -1,-0.2 0.911 110.3 53.1 -62.7 -42.8 -8.4 -53.4 35.6 28 31 A E H X S+ 0 0 71 -4,-1.8 4,-0.6 1,-0.2 -2,-0.2 0.880 109.7 47.3 -64.0 -39.9 -11.6 -54.7 34.0 29 32 A F H ><>S+ 0 0 46 -4,-2.5 5,-2.0 2,-0.2 3,-0.5 0.850 109.7 54.1 -68.4 -34.4 -11.4 -52.2 31.1 30 33 A L H ><5S+ 0 0 3 -4,-1.8 3,-2.1 -5,-0.3 59,-0.3 0.895 102.3 57.5 -63.6 -39.9 -7.7 -53.1 30.7 31 34 A E H 3<5S+ 0 0 91 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.720 101.3 57.8 -61.0 -22.7 -8.8 -56.7 30.4 32 35 A Q T <<5S- 0 0 114 -4,-0.6 -1,-0.3 -3,-0.5 -2,-0.2 0.491 124.0-108.1 -85.1 -6.4 -10.9 -55.5 27.5 33 36 A G T < 5S+ 0 0 42 -3,-2.1 -3,-0.2 1,-0.3 2,-0.2 0.682 78.5 126.1 87.1 19.6 -7.8 -54.2 25.8 34 37 A K < - 0 0 52 -5,-2.0 2,-0.3 -31,-0.1 -1,-0.3 -0.557 57.8-113.2-105.8 172.4 -8.6 -50.6 26.4 35 38 A H E -a 5 0A 35 -31,-0.7 -29,-2.5 -2,-0.2 2,-0.5 -0.798 17.1-152.7-104.8 145.6 -6.8 -47.7 28.0 36 39 A V E -aB 6 85A 0 49,-1.2 49,-1.6 -2,-0.3 2,-0.7 -0.983 6.3-155.0-118.3 125.7 -7.7 -45.9 31.1 37 40 A R E -aB 7 84A 93 -31,-2.9 -29,-0.8 -2,-0.5 2,-0.7 -0.885 7.7-151.7-102.7 115.2 -6.6 -42.3 31.6 38 41 A F E +aB 8 83A 1 45,-2.8 45,-2.2 -2,-0.7 2,-0.4 -0.774 20.0 178.5 -90.2 116.6 -6.3 -41.3 35.1 39 42 A R E -aB 9 82A 73 -31,-2.0 -29,-2.4 -2,-0.7 2,-0.4 -0.968 8.1-171.9-122.5 133.0 -7.0 -37.6 35.5 40 43 A V E -aB 10 81A 0 41,-2.3 41,-2.7 -2,-0.4 2,-0.5 -0.987 9.2-154.8-128.3 131.3 -7.0 -35.7 38.7 41 44 A F E -aB 11 80A 63 -31,-1.2 -29,-0.6 -2,-0.4 2,-0.4 -0.897 23.5-123.6-104.6 129.1 -8.0 -32.1 39.2 42 45 A L - 0 0 0 37,-1.1 5,-0.1 -2,-0.5 -31,-0.0 -0.595 18.0-140.1 -73.5 128.0 -6.6 -30.2 42.1 43 46 A K - 0 0 119 -2,-0.4 -1,-0.1 1,-0.1 -32,-0.0 0.884 50.3 -87.2 -60.5 -46.2 -9.5 -28.9 44.2 44 47 A G S > S+ 0 0 33 -3,-0.0 3,-0.8 0, 0.0 4,-0.2 -0.126 115.6 52.8 172.6 -61.5 -8.0 -25.5 45.0 45 48 A R G > S+ 0 0 205 1,-0.2 3,-0.9 2,-0.2 -3,-0.0 0.867 112.3 49.1 -67.0 -37.3 -5.7 -25.3 48.0 46 49 A E G > S+ 0 0 22 1,-0.2 3,-2.2 2,-0.1 6,-0.3 0.499 85.0 92.3 -80.4 -3.9 -3.5 -28.1 46.8 47 50 A M G < S+ 0 0 56 -3,-0.8 -1,-0.2 1,-0.3 -2,-0.2 0.723 75.5 66.4 -63.2 -19.7 -3.3 -26.5 43.4 48 51 A A G < S+ 0 0 88 -3,-0.9 -1,-0.3 -4,-0.2 -2,-0.1 0.585 101.1 53.6 -76.5 -11.1 -0.2 -24.8 44.6 49 52 A T X - 0 0 72 -3,-2.2 3,-1.3 1,-0.1 4,-0.5 -0.865 58.8-177.5-131.2 100.1 1.5 -28.3 44.8 50 53 A P T >> S+ 0 0 55 0, 0.0 4,-1.6 0, 0.0 3,-0.7 0.757 80.3 73.4 -63.3 -25.7 1.4 -30.4 41.5 51 54 A E H 3> S+ 0 0 142 1,-0.2 4,-3.2 2,-0.2 5,-0.2 0.768 83.5 68.4 -63.1 -25.5 3.1 -33.2 43.4 52 55 A A H <> S+ 0 0 27 -3,-1.3 4,-1.7 -6,-0.3 -1,-0.2 0.923 103.7 42.4 -60.3 -45.0 -0.1 -33.9 45.3 53 56 A G H <> S+ 0 0 0 -3,-0.7 4,-2.3 -4,-0.5 -1,-0.2 0.881 113.7 53.2 -67.1 -38.4 -1.8 -35.1 42.0 54 57 A V H X S+ 0 0 25 -4,-1.6 4,-2.6 1,-0.2 -2,-0.2 0.937 108.8 47.9 -62.7 -47.3 1.4 -37.0 41.1 55 58 A A H X S+ 0 0 50 -4,-3.2 4,-1.7 1,-0.2 -1,-0.2 0.861 111.0 52.3 -63.1 -37.8 1.5 -38.9 44.4 56 59 A L H X S+ 0 0 20 -4,-1.7 4,-1.5 -5,-0.2 -1,-0.2 0.939 112.3 44.5 -62.6 -47.6 -2.2 -39.8 44.1 57 60 A L H X S+ 0 0 0 -4,-2.3 4,-2.5 1,-0.2 -2,-0.2 0.871 109.0 56.4 -66.2 -39.6 -1.7 -41.2 40.6 58 61 A E H X S+ 0 0 87 -4,-2.6 4,-2.3 1,-0.2 -1,-0.2 0.870 104.5 53.7 -60.6 -36.7 1.5 -43.1 41.6 59 62 A K H X S+ 0 0 98 -4,-1.7 4,-1.8 2,-0.2 -1,-0.2 0.903 108.4 50.1 -63.8 -39.9 -0.6 -44.8 44.4 60 63 A I H X S+ 0 0 0 -4,-1.5 4,-2.1 2,-0.2 5,-0.2 0.935 109.3 50.7 -61.7 -47.7 -3.0 -45.9 41.7 61 64 A W H X S+ 0 0 52 -4,-2.5 4,-1.7 1,-0.2 -2,-0.2 0.889 107.7 53.7 -58.0 -40.6 -0.2 -47.2 39.5 62 65 A T H < S+ 0 0 91 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.880 109.3 49.5 -61.3 -39.8 1.1 -49.1 42.5 63 66 A M H < S+ 0 0 75 -4,-1.8 3,-0.3 1,-0.2 -2,-0.2 0.898 123.2 28.3 -66.8 -42.0 -2.4 -50.7 43.0 64 67 A I H >X S+ 0 0 0 -4,-2.1 3,-1.8 1,-0.2 4,-1.4 0.428 85.4 104.6-105.1 -0.3 -2.9 -51.8 39.3 65 68 A E T 3< S+ 0 0 88 -4,-1.7 -1,-0.2 1,-0.3 -3,-0.1 0.690 71.1 71.8 -56.3 -18.7 0.7 -52.3 38.2 66 69 A N T 34 S+ 0 0 82 -3,-0.3 -1,-0.3 -4,-0.2 -2,-0.1 0.866 118.6 13.3 -65.7 -36.5 0.1 -56.1 38.5 67 70 A E T <4 S+ 0 0 75 -3,-1.8 21,-1.4 2,-0.0 2,-0.3 0.309 120.2 77.1-122.8 6.1 -2.1 -56.1 35.4 68 71 A A E < -C 87 0A 1 -4,-1.4 2,-0.4 19,-0.2 -41,-0.0 -0.859 62.7-144.7-121.2 152.5 -1.3 -52.7 33.9 69 72 A N E -C 86 0A 62 17,-2.9 17,-2.4 -2,-0.3 2,-0.8 -0.884 26.4-115.7-112.2 148.4 1.6 -51.2 32.0 70 73 A R E -C 85 0A 100 -2,-0.4 15,-0.2 15,-0.2 3,-0.1 -0.742 26.5-178.8 -90.9 111.1 2.8 -47.7 32.4 71 74 A D - 0 0 87 13,-2.0 2,-0.3 -2,-0.8 -1,-0.2 0.878 69.1 -29.8 -72.7 -38.7 2.3 -45.6 29.3 72 75 A K S S- 0 0 77 12,-1.1 -1,-0.2 0, 0.0 12,-0.2 -0.933 74.0 -74.7-163.3-177.8 3.9 -42.6 30.9 73 76 A E - 0 0 136 -2,-0.3 2,-0.3 10,-0.1 9,-0.1 -0.602 48.9-102.1 -91.9 150.6 4.5 -40.7 34.1 74 77 A P + 0 0 12 0, 0.0 2,-0.3 0, 0.0 9,-0.2 -0.564 50.9 169.3 -69.0 132.3 1.9 -38.6 36.0 75 78 A N E -D 82 0A 98 7,-1.3 7,-2.1 -2,-0.3 2,-0.7 -0.994 38.8-112.5-147.6 151.5 2.4 -34.9 35.4 76 79 A F E +D 81 0A 58 -2,-0.3 2,-0.3 5,-0.3 5,-0.3 -0.758 49.0 150.1 -86.9 115.5 0.6 -31.7 36.1 77 80 A E + 0 0 140 3,-3.1 3,-0.3 -2,-0.7 -2,-0.1 -0.852 66.7 3.7-152.0 109.7 -0.5 -30.2 32.8 78 81 A G S S- 0 0 48 -2,-0.3 3,-0.1 1,-0.2 -1,-0.0 0.804 126.3 -62.5 85.5 31.6 -3.6 -28.0 32.3 79 82 A R S S+ 0 0 158 1,-0.2 -37,-1.1 -32,-0.1 2,-0.4 0.462 122.9 97.0 69.3 3.5 -4.6 -27.9 36.0 80 83 A Y E -B 41 0A 98 -3,-0.3 -3,-3.1 -39,-0.2 2,-0.6 -0.968 66.6-146.7-121.1 137.6 -5.0 -31.7 35.7 81 84 A V E -BD 40 76A 0 -41,-2.7 -41,-2.3 -2,-0.4 2,-0.4 -0.912 28.3-173.8 -99.9 124.1 -2.4 -34.3 36.6 82 85 A N E +BD 39 75A 18 -7,-2.1 -7,-1.3 -2,-0.6 2,-0.3 -0.959 19.0 178.3-130.8 142.8 -2.7 -37.2 34.3 83 86 A M E -B 38 0A 1 -45,-2.2 -45,-2.8 -2,-0.4 2,-0.4 -0.985 15.9-150.1-135.1 143.2 -1.2 -40.7 34.0 84 87 A L E -B 37 0A 31 -2,-0.3 -13,-2.0 -47,-0.2 -12,-1.1 -0.941 4.7-160.7-122.6 140.5 -2.0 -43.3 31.4 85 88 A V E -BC 36 70A 0 -49,-1.6 -49,-1.2 -2,-0.4 -15,-0.2 -0.963 7.4-149.2-122.9 133.6 -1.9 -47.1 31.7 86 89 A T E - C 0 69A 27 -17,-2.4 -17,-2.9 -2,-0.4 -51,-0.1 -0.820 30.5-108.3 -98.7 136.9 -1.8 -49.6 28.8 87 90 A P E > - C 0 68A 4 0, 0.0 3,-1.1 0, 0.0 -19,-0.2 -0.343 17.0-132.7 -64.7 144.8 -3.4 -53.0 29.3 88 91 A K T 3 S+ 0 0 109 -21,-1.4 -20,-0.1 1,-0.3 -57,-0.1 0.519 100.7 74.8 -78.7 -3.3 -1.0 -55.9 29.7 89 92 A K T 3 S+ 0 0 100 -59,-0.3 3,-0.4 -22,-0.2 -1,-0.3 0.206 75.0 117.8 -91.2 13.9 -3.1 -57.9 27.1 90 93 A A < + 0 0 51 -3,-1.1 -56,-0.0 1,-0.2 -57,-0.0 -0.248 53.1 44.6 -76.4 168.9 -1.6 -55.7 24.4 91 94 A E + 0 0 150 1,-0.1 -1,-0.2 2,-0.0 3,-0.1 0.720 66.9 132.3 66.3 24.1 0.6 -57.0 21.5 92 95 A G + 0 0 25 -3,-0.4 2,-3.1 1,-0.2 4,-0.1 0.892 32.2 176.7 -67.0 -39.5 -1.8 -59.9 21.0 93 96 A H S S+ 0 0 131 1,-0.3 -1,-0.2 2,-0.2 -2,-0.0 -0.171 80.0 30.5 65.8 -48.3 -1.7 -59.1 17.2 94 97 A H S S+ 0 0 167 -2,-3.1 2,-2.0 -3,-0.1 -1,-0.3 0.424 93.5 102.7-112.6 -4.3 -4.0 -62.0 16.4 95 98 A H + 0 0 125 3,-0.0 2,-0.3 0, 0.0 -2,-0.2 -0.492 62.2 89.0 -84.7 69.8 -5.9 -62.0 19.6 96 99 A H + 0 0 135 -2,-2.0 0, 0.0 1,-0.3 0, 0.0 -0.933 69.2 21.7-163.0 144.1 -9.1 -60.4 18.4 97 100 A H 0 0 171 -2,-0.3 -1,-0.3 1,-0.2 0, 0.0 0.874 360.0 360.0 64.1 110.3 -12.4 -61.4 16.8 98 101 A H 0 0 235 -3,-0.1 -1,-0.2 0, 0.0 -3,-0.0 -0.689 360.0 360.0 -89.5 360.0 -13.5 -65.0 17.4