==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-SEP-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 18-APR-13 2M76 . COMPND 2 MOLECULE: CARNITINE O-PALMITOYLTRANSFERASE 1, BRAIN ISOFORM . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.SAMANTA,A.J.SITU,T.S.ULMER . 50 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6031.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 25 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 42.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 224 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -35.5 13.5 -12.5 34.1 2 2 A A + 0 0 108 1,-0.2 2,-0.5 0, 0.0 0, 0.0 0.877 360.0 43.9 -63.7 -37.9 16.6 -10.3 34.2 3 3 A E S S+ 0 0 179 2,-0.0 2,-0.3 0, 0.0 -1,-0.2 -0.942 72.7 153.9-114.4 126.6 18.0 -12.2 31.2 4 4 A A - 0 0 89 -2,-0.5 2,-0.4 -3,-0.0 3,-0.1 -0.994 30.4-137.6-149.5 151.7 15.8 -12.9 28.1 5 5 A H - 0 0 155 -2,-0.3 3,-0.1 1,-0.1 -2,-0.0 -0.894 12.6-140.6-114.0 142.2 16.2 -13.5 24.4 6 6 A Q S S+ 0 0 177 -2,-0.4 2,-0.3 1,-0.2 -1,-0.1 0.893 89.0 1.4 -64.4 -40.1 14.0 -12.2 21.6 7 7 A A - 0 0 43 2,-0.2 -1,-0.2 1,-0.1 -3,-0.0 -0.994 63.2-126.8-149.3 151.4 14.3 -15.5 19.7 8 8 A V S S+ 0 0 148 -2,-0.3 -1,-0.1 -3,-0.1 2,-0.1 0.921 97.2 50.1 -63.2 -45.1 15.9 -18.9 20.2 9 9 A G S S- 0 0 49 -3,-0.1 2,-0.3 1,-0.0 -2,-0.2 -0.253 82.9-126.2 -86.8 178.4 17.6 -18.7 16.8 10 10 A F - 0 0 177 1,-0.1 3,-0.1 -2,-0.1 -2,-0.0 -0.949 28.2 -94.4-129.2 149.1 19.7 -15.9 15.4 11 11 A R - 0 0 164 -2,-0.3 -1,-0.1 1,-0.1 5,-0.1 0.043 66.7 -65.9 -50.1 168.3 19.5 -14.0 12.1 12 12 A P > - 0 0 79 0, 0.0 4,-1.4 0, 0.0 3,-0.3 -0.283 38.2-128.8 -61.0 144.6 21.7 -15.3 9.2 13 13 A S T 4 S+ 0 0 109 1,-0.2 5,-0.1 2,-0.2 -2,-0.1 0.843 109.6 59.8 -61.8 -33.3 25.5 -15.1 9.7 14 14 A L T 4 S+ 0 0 153 1,-0.2 -1,-0.2 3,-0.1 4,-0.1 0.895 102.3 51.0 -62.2 -41.8 25.6 -13.3 6.3 15 15 A T T 4 S+ 0 0 85 -3,-0.3 -1,-0.2 2,-0.1 -2,-0.2 0.857 98.8 81.7 -65.3 -34.0 23.4 -10.5 7.5 16 16 A S S < S- 0 0 75 -4,-1.4 2,-0.8 1,-0.1 0, 0.0 -0.425 86.4-122.6 -72.5 146.5 25.7 -10.1 10.6 17 17 A D - 0 0 101 1,-0.2 -1,-0.1 -2,-0.1 -3,-0.1 -0.813 21.5-172.3 -95.7 109.5 28.8 -8.0 10.1 18 18 A G + 0 0 84 -2,-0.8 -1,-0.2 -5,-0.1 2,-0.1 0.886 66.7 82.2 -64.9 -39.4 31.9 -10.1 11.0 19 19 A A S S- 0 0 59 1,-0.1 3,-0.1 2,-0.0 -2,-0.1 -0.378 81.4-133.8 -68.1 144.5 34.2 -7.0 10.7 20 20 A E S S+ 0 0 192 1,-0.1 2,-0.3 -2,-0.1 -1,-0.1 0.893 89.4 15.3 -65.5 -39.6 34.3 -4.7 13.7 21 21 A V - 0 0 81 1,-0.0 -1,-0.1 -3,-0.0 -2,-0.0 -0.924 50.5-173.0-134.2 159.2 33.9 -1.7 11.4 22 22 A E + 0 0 115 -2,-0.3 -1,-0.0 3,-0.1 -2,-0.0 0.042 51.8 115.4-139.2 25.6 32.8 -1.0 7.8 23 23 A L S S- 0 0 151 1,-0.1 -1,-0.0 3,-0.0 0, 0.0 0.912 103.6 -75.7 -63.2 -42.5 33.5 2.7 7.4 24 24 A S S > S+ 0 0 59 3,-0.0 4,-3.2 0, 0.0 5,-0.2 0.322 83.6 141.9 153.8 18.8 36.1 1.9 4.7 25 25 A A H > S+ 0 0 43 1,-0.2 4,-3.5 2,-0.2 5,-0.3 0.911 74.1 52.7 -49.3 -50.6 39.1 0.6 6.8 26 26 A P H > S+ 0 0 91 0, 0.0 4,-1.9 0, 0.0 -1,-0.2 0.921 114.4 42.5 -54.1 -45.0 40.0 -2.0 4.1 27 27 A V H > S+ 0 0 77 2,-0.2 4,-2.4 1,-0.2 -2,-0.2 0.912 115.6 49.8 -66.8 -43.8 40.1 0.6 1.4 28 28 A L H X S+ 0 0 106 -4,-3.2 4,-2.8 1,-0.2 -1,-0.2 0.894 109.4 51.2 -62.6 -41.8 41.9 3.1 3.6 29 29 A Q H X S+ 0 0 149 -4,-3.5 4,-2.4 -5,-0.2 -1,-0.2 0.904 111.2 47.8 -63.6 -41.6 44.5 0.5 4.6 30 30 A E H X S+ 0 0 138 -4,-1.9 4,-2.3 -5,-0.3 -2,-0.2 0.898 113.2 48.1 -66.4 -41.4 45.2 -0.4 0.9 31 31 A I H X S+ 0 0 98 -4,-2.4 4,-2.8 2,-0.2 -2,-0.2 0.939 112.4 48.7 -65.7 -43.7 45.5 3.3 -0.0 32 32 A Y H X S+ 0 0 149 -4,-2.8 4,-2.1 1,-0.2 -2,-0.2 0.926 113.3 46.8 -61.1 -46.0 47.8 4.1 2.9 33 33 A L H X S+ 0 0 117 -4,-2.4 4,-1.6 1,-0.2 -1,-0.2 0.909 114.8 46.8 -63.3 -41.8 50.0 1.1 2.0 34 34 A S H X S+ 0 0 53 -4,-2.3 4,-1.7 1,-0.2 -2,-0.2 0.879 110.6 52.9 -67.5 -37.7 50.1 2.1 -1.6 35 35 A G H X S+ 0 0 34 -4,-2.8 4,-2.9 1,-0.2 -2,-0.2 0.884 104.6 55.5 -65.6 -39.1 50.8 5.7 -0.8 36 36 A L H X S+ 0 0 79 -4,-2.1 4,-1.5 2,-0.2 -1,-0.2 0.909 105.9 51.1 -61.4 -42.2 53.8 4.7 1.4 37 37 A R H X S+ 0 0 200 -4,-1.6 4,-0.5 1,-0.2 3,-0.2 0.927 116.2 41.3 -60.8 -42.7 55.4 2.8 -1.5 38 38 A S H >X S+ 0 0 59 -4,-1.7 4,-1.1 1,-0.2 3,-0.8 0.830 106.2 65.7 -70.8 -34.8 54.9 5.9 -3.7 39 39 A W H 3X S+ 0 0 137 -4,-2.9 4,-2.8 1,-0.2 5,-0.2 0.846 89.8 65.2 -57.1 -38.8 56.0 8.2 -0.8 40 40 A K H 3X S+ 0 0 141 -4,-1.5 4,-0.6 1,-0.2 -1,-0.2 0.883 98.7 52.9 -55.3 -40.2 59.5 6.8 -0.9 41 41 A R H X< S+ 0 0 202 -3,-0.8 3,-0.6 -4,-0.5 4,-0.3 0.921 114.5 41.4 -62.1 -41.1 60.1 8.2 -4.4 42 42 A H H 3< S+ 0 0 142 -4,-1.1 3,-0.5 1,-0.2 4,-0.3 0.813 116.1 50.6 -72.9 -32.4 59.0 11.7 -3.1 43 43 A L H 3X S+ 0 0 64 -4,-2.8 4,-3.7 1,-0.2 5,-0.3 0.433 81.3 100.2 -83.0 -5.3 61.0 11.2 0.1 44 44 A S H S+ 0 0 215 -3,-0.5 4,-1.6 -4,-0.3 -1,-0.2 0.958 117.6 38.1 -60.9 -49.7 65.7 13.6 -1.4 46 46 A F H 4 S+ 0 0 162 -4,-0.3 -2,-0.2 1,-0.2 -1,-0.2 0.888 116.3 53.4 -66.4 -40.4 65.1 13.7 2.4 47 47 A W H < S+ 0 0 182 -4,-3.7 -2,-0.2 1,-0.2 -1,-0.2 0.892 107.0 51.1 -62.4 -41.7 65.9 10.0 2.8 48 48 A N H < S+ 0 0 115 -4,-2.7 2,-0.8 -5,-0.3 -1,-0.2 0.898 106.9 59.9 -63.5 -40.8 69.2 10.4 1.0 49 49 A D < 0 0 115 -4,-1.6 -1,-0.2 -5,-0.2 -4,-0.0 -0.811 360.0 360.0 -94.9 110.9 70.2 13.3 3.3 50 50 A F 0 0 255 -2,-0.8 -1,-0.2 0, 0.0 -2,-0.0 0.968 360.0 360.0 -58.6 360.0 70.2 12.2 6.9