==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 31-JUL-02 1MA5 . COMPND 2 MOLECULE: TACHYPLESIN 1; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.LAEDERACH,A.H.ANDREOTTI,D.B.FULTON . 17 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2002.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 35.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 11.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 11.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 153 0, 0.0 8,-0.0 0, 0.0 9,-0.0 0.000 360.0 360.0 360.0 35.1 -4.2 -0.3 6.8 2 2 A W - 0 0 158 7,-0.0 0, 0.0 1,-0.0 0, 0.0 0.166 360.0 -43.9 -83.7-154.9 -4.9 -2.9 4.1 3 3 A a S S- 0 0 71 1,-0.2 -1,-0.0 3,-0.0 0, 0.0 0.784 119.3 -52.9 -45.0 -29.9 -2.4 -5.0 2.1 4 4 A F - 0 0 60 13,-0.1 4,-0.2 2,-0.0 3,-0.2 0.282 58.8-128.3 169.2 -3.9 -0.5 -1.8 1.9 5 5 A R > - 0 0 65 1,-0.2 3,-1.6 2,-0.1 6,-0.6 0.834 35.4-156.4 38.1 43.2 -2.9 0.8 0.4 6 6 A V B 3 S+a 11 0A 57 1,-0.3 6,-0.3 7,-0.2 -1,-0.2 -0.271 73.8 1.9 -52.3 119.7 -0.2 1.5 -2.2 7 7 A b T 3 S+ 0 0 70 4,-2.6 5,-0.3 1,-0.2 -1,-0.3 0.896 130.1 67.1 66.0 41.1 -0.8 5.1 -3.4 8 8 A Y B X S+B 11 0A 153 -3,-1.6 3,-1.3 3,-1.3 -1,-0.2 -0.965 85.1 26.7-175.3 167.0 -3.7 5.5 -1.0 9 9 A R T 3 S+ 0 0 157 1,-0.3 -3,-0.1 -2,-0.3 -7,-0.0 0.778 142.3 0.5 35.2 36.9 -4.7 5.8 2.6 10 10 A G T 3 S- 0 0 58 -9,-0.0 -1,-0.3 -5,-0.0 2,-0.3 -0.306 120.0 -60.1 158.6 -66.4 -1.2 7.1 3.1 11 11 A I B < -aB 6 8A 112 -3,-1.3 -4,-2.6 -6,-0.6 -3,-1.3 -0.970 68.7 -45.9 172.8-178.8 0.9 7.4 -0.0 12 12 A b + 0 0 87 -5,-0.3 -6,-0.1 -6,-0.3 2,-0.1 -0.637 58.2 155.5 -77.2 110.1 2.5 5.5 -2.9 13 13 A Y - 0 0 120 -2,-0.7 2,-0.8 -9,-0.1 -7,-0.2 -0.516 25.7-162.6-137.5 68.7 4.1 2.4 -1.5 14 14 A R + 0 0 214 1,-0.2 -2,-0.1 -2,-0.1 -9,-0.0 -0.332 59.0 97.2 -55.5 97.8 4.4 -0.3 -4.1 15 15 A R + 0 0 169 -2,-0.8 -1,-0.2 0, 0.0 0, 0.0 0.050 26.1 153.5 179.2 50.6 5.0 -3.3 -1.9 16 16 A a 0 0 56 1,-0.2 -2,-0.1 -12,-0.0 -11,-0.1 0.733 360.0 360.0 -61.4 -21.3 1.8 -5.3 -1.3 17 17 A R 0 0 242 -13,-0.0 -1,-0.2 0, 0.0 -13,-0.1 -0.019 360.0 360.0 65.0 360.0 4.0 -8.3 -0.7