==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 31-JUL-02 1MA6 . COMPND 2 MOLECULE: TACHYPLESIN I; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.LAEDERACH,A.H.ANDREOTTI,D.B.FULTON . 17 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2276.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 134 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 58.4 -2.0 3.5 -4.7 2 2 A W - 0 0 59 2,-0.0 2,-0.1 0, 0.0 0, 0.0 0.987 360.0 -30.6 -57.5 -80.1 -5.1 2.3 -2.8 3 3 A Y S > S- 0 0 117 0, 0.0 3,-1.0 0, 0.0 0, 0.0 -0.069 110.1 -2.7-121.4-142.1 -6.7 5.4 -1.2 4 4 A F T 3 S+ 0 0 124 1,-0.3 -2,-0.0 2,-0.1 0, 0.0 0.621 134.8 39.0 -24.8 -34.9 -6.0 8.9 0.3 5 5 A R T 3 S+ 0 0 120 0, 0.0 -1,-0.3 0, 0.0 0, 0.0 0.893 76.1 175.1 -89.3 -42.6 -2.2 8.5 -0.2 6 6 A V < + 0 0 82 -3,-1.0 -2,-0.1 1,-0.1 0, 0.0 0.896 37.6 117.9 35.1 70.2 -2.3 6.7 -3.5 7 7 A Y S S+ 0 0 167 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 0.208 71.2 24.2-146.3 14.1 1.5 6.7 -3.9 8 8 A Y - 0 0 135 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.305 67.7-147.9-139.5 -89.3 2.5 3.1 -4.0 9 9 A R + 0 0 173 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.483 67.2 72.0 103.5 116.4 0.4 0.0 -5.1 10 10 A G + 0 0 45 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.241 47.3 122.2 136.3 -14.0 0.9 -3.4 -3.6 11 11 A I - 0 0 71 1,-0.1 4,-0.1 3,-0.0 0, 0.0 0.800 59.2-150.5 -47.8 -31.3 -0.5 -3.1 -0.1 12 12 A Y + 0 0 140 1,-0.1 3,-0.4 2,-0.1 -1,-0.1 0.854 50.4 136.9 60.6 35.2 -2.9 -5.9 -1.0 13 13 A Y S S+ 0 0 123 1,-0.2 3,-0.2 2,-0.1 -1,-0.1 0.872 78.0 30.2 -78.8 -39.4 -5.5 -4.5 1.4 14 14 A R S S+ 0 0 200 1,-0.2 -1,-0.2 2,-0.0 -2,-0.1 -0.047 100.1 88.4-109.0 29.5 -8.4 -4.9 -0.9 15 15 A R + 0 0 172 -3,-0.4 -1,-0.2 -4,-0.1 2,-0.1 -0.066 53.8 155.0-115.7 30.6 -7.0 -8.0 -2.7 16 16 A Y 0 0 173 -3,-0.2 -3,-0.1 0, 0.0 -4,-0.0 -0.392 360.0 360.0 -62.7 129.9 -8.4 -10.6 -0.3 17 17 A R 0 0 241 -2,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.235 360.0 360.0 61.2 360.0 -8.8 -14.0 -2.0