==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-AUG-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 27-JUN-13 2MA4 . COMPND 2 MOLECULE: PUTATIVE PERIPLASMIC PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SE . AUTHOR A.ELETSKY,Q.ZHANG,G.LIU,H.WANG,C.NWOSU,K.CUNNINGHAM,L.MA,R.X . 78 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5602.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 6.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 17.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 17.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 22 A A 0 0 37 0, 0.0 2,-0.3 0, 0.0 47,-0.2 0.000 360.0 360.0 360.0 143.4 -0.2 2.6 6.7 2 23 A E E -a 48 0A 100 45,-1.1 47,-3.0 39,-0.0 2,-0.6 -0.889 360.0-117.0-121.6 151.4 -3.7 1.3 5.6 3 24 A I E +a 49 0A 39 -2,-0.3 2,-0.3 45,-0.2 47,-0.2 -0.789 44.4 149.9 -90.9 119.1 -4.8 -1.4 3.2 4 25 A M E -a 50 0A 37 45,-2.4 47,-2.5 -2,-0.6 2,-0.1 -0.956 39.9-120.7-135.0 155.7 -6.8 -0.3 0.1 5 26 A K E > -a 51 0A 74 -2,-0.3 4,-2.5 45,-0.2 47,-0.2 -0.389 34.0-104.2 -81.5 173.5 -7.1 -1.7 -3.4 6 27 A K H > S+ 0 0 107 45,-0.9 4,-2.5 1,-0.2 46,-0.1 0.873 122.8 57.9 -65.3 -36.7 -6.2 0.3 -6.6 7 28 A T H 4 S+ 0 0 106 2,-0.2 4,-0.5 1,-0.2 -1,-0.2 0.855 111.9 40.7 -61.6 -37.9 -10.0 0.7 -7.3 8 29 A D H >4 S+ 0 0 67 1,-0.1 3,-0.6 2,-0.1 4,-0.3 0.937 118.7 45.3 -73.4 -49.4 -10.4 2.4 -3.8 9 30 A F H >< S+ 0 0 5 -4,-2.5 3,-1.9 1,-0.2 -2,-0.2 0.784 95.1 76.7 -65.8 -34.6 -7.2 4.5 -4.0 10 31 A D G >< S+ 0 0 85 -4,-2.5 3,-1.8 1,-0.3 4,-0.3 0.837 86.0 62.7 -48.8 -41.6 -7.8 5.7 -7.6 11 32 A K G < S+ 0 0 153 -3,-0.6 -1,-0.3 -4,-0.5 -2,-0.2 0.772 117.0 28.8 -55.2 -33.5 -10.4 8.2 -6.5 12 33 A V G X S+ 0 0 53 -3,-1.9 3,-1.7 -4,-0.3 4,-0.3 0.092 84.2 122.7-117.5 19.4 -7.8 10.1 -4.4 13 34 A A G X S+ 0 0 39 -3,-1.8 3,-1.9 1,-0.3 -2,-0.1 0.881 72.6 53.3 -51.5 -47.6 -4.7 9.2 -6.5 14 35 A S G 3 S+ 0 0 83 -4,-0.3 -1,-0.3 1,-0.3 -2,-0.1 0.609 100.2 63.3 -66.8 -14.6 -3.6 12.9 -7.2 15 36 A E G < S+ 0 0 112 -3,-1.7 55,-2.2 54,-0.0 -1,-0.3 0.512 106.6 50.2 -86.0 -7.9 -3.7 13.5 -3.4 16 37 A Y E < S-B 69 0A 43 -3,-1.9 2,-0.4 -4,-0.3 53,-0.2 -0.738 71.2-136.9-128.1 172.9 -0.8 11.0 -2.9 17 38 A T E -B 68 0A 75 51,-2.0 51,-2.2 -2,-0.2 2,-0.6 -0.999 22.2-120.7-140.3 129.0 2.7 10.2 -4.3 18 39 A K E +B 67 0A 114 -2,-0.4 49,-0.2 49,-0.2 3,-0.1 -0.613 31.3 172.4 -75.3 111.7 4.2 6.7 -5.2 19 40 A I E - 0 0 73 47,-2.1 2,-0.3 -2,-0.6 48,-0.2 0.479 60.2 -54.3 -98.7 -7.1 7.4 6.3 -3.1 20 41 A G E -B 66 0A 22 46,-1.0 46,-2.0 2,-0.0 2,-0.4 -0.971 54.1 -83.8 162.6-174.5 8.0 2.6 -4.1 21 42 A T E -B 65 0A 79 -2,-0.3 2,-0.3 44,-0.2 44,-0.2 -0.993 30.4-162.0-124.5 137.5 6.6 -1.0 -4.4 22 43 A I E -B 64 0A 11 42,-2.8 42,-2.4 -2,-0.4 2,-0.3 -0.838 6.7-170.0-111.4 154.3 6.5 -3.6 -1.6 23 44 A S E -B 63 0A 61 -2,-0.3 40,-0.2 40,-0.2 2,-0.1 -0.992 21.1-124.6-145.3 137.2 6.1 -7.4 -2.0 24 45 A T - 0 0 4 38,-1.8 3,-0.1 -2,-0.3 9,-0.0 -0.479 34.5-110.9 -72.3 153.2 5.4 -10.3 0.4 25 46 A T S S- 0 0 131 1,-0.1 2,-0.3 -2,-0.1 -1,-0.1 0.814 90.8 -38.7 -56.1 -30.1 7.9 -13.2 0.3 26 47 A G S S- 0 0 18 35,-0.2 2,-1.7 36,-0.1 -1,-0.1 -0.960 85.2 -54.4-173.2-176.8 5.0 -15.2 -1.2 27 48 A E + 0 0 155 -2,-0.3 35,-0.1 1,-0.2 34,-0.1 -0.595 67.4 156.7 -73.1 82.4 1.2 -15.8 -1.0 28 49 A M - 0 0 77 -2,-1.7 -1,-0.2 33,-0.3 34,-0.0 0.965 62.3 -32.3 -74.5 -85.6 1.2 -16.6 2.7 29 50 A S > - 0 0 69 1,-0.1 4,-2.3 0, 0.0 -1,-0.3 -0.942 58.7-116.1-133.6 158.4 -2.3 -15.9 4.1 30 51 A P H > S+ 0 0 38 0, 0.0 4,-1.2 0, 0.0 -1,-0.1 0.945 114.4 29.7 -62.9 -53.7 -4.9 -13.2 2.8 31 52 A L H > S+ 0 0 105 2,-0.2 4,-2.0 1,-0.2 5,-0.1 0.856 120.4 55.7 -73.3 -37.0 -5.1 -11.0 6.0 32 53 A D H > S+ 0 0 76 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.849 103.7 54.3 -63.1 -37.6 -1.5 -11.9 7.0 33 54 A A H X S+ 0 0 5 -4,-2.3 4,-2.2 2,-0.2 -1,-0.2 0.905 107.7 51.3 -62.8 -42.4 -0.2 -10.6 3.6 34 55 A R H X S+ 0 0 66 -4,-1.2 4,-2.1 2,-0.2 -2,-0.2 0.943 110.9 46.8 -55.0 -52.6 -2.0 -7.3 4.4 35 56 A E H X S+ 0 0 98 -4,-2.0 4,-2.0 1,-0.2 -2,-0.2 0.847 112.3 49.8 -63.0 -39.8 -0.3 -7.0 7.9 36 57 A D H X S+ 0 0 20 -4,-2.2 4,-2.1 2,-0.2 -1,-0.2 0.874 112.1 48.1 -67.6 -38.6 3.1 -7.9 6.4 37 58 A L H X S+ 0 0 1 -4,-2.2 4,-2.6 2,-0.2 -2,-0.2 0.821 109.5 52.6 -71.8 -32.3 2.7 -5.2 3.7 38 59 A I H X S+ 0 0 44 -4,-2.1 4,-2.6 2,-0.2 5,-0.3 0.890 108.1 53.4 -66.6 -39.2 1.5 -2.7 6.4 39 60 A K H X S+ 0 0 137 -4,-2.0 4,-2.1 2,-0.2 -2,-0.2 0.959 114.0 40.2 -55.2 -55.9 4.8 -3.6 8.2 40 61 A K H X S+ 0 0 54 -4,-2.1 4,-1.8 2,-0.2 -2,-0.2 0.953 118.7 46.2 -59.8 -53.1 6.9 -2.8 5.1 41 62 A A H <>S+ 0 0 0 -4,-2.6 5,-2.7 1,-0.2 4,-0.3 0.912 115.1 44.2 -57.9 -52.5 5.0 0.3 4.1 42 63 A D H ><5S+ 0 0 97 -4,-2.6 3,-0.9 1,-0.2 -1,-0.2 0.852 110.6 56.2 -65.9 -36.5 4.8 1.9 7.5 43 64 A E H 3<5S+ 0 0 133 -4,-2.1 -1,-0.2 -5,-0.3 -2,-0.2 0.844 109.0 47.2 -60.7 -36.9 8.5 1.1 8.1 44 65 A K T 3<5S- 0 0 113 -4,-1.8 -1,-0.3 -3,-0.3 -2,-0.2 0.472 124.8-110.2 -81.2 -3.9 9.2 3.1 4.8 45 66 A G T < 5 + 0 0 33 -3,-0.9 -3,-0.2 -4,-0.3 2,-0.1 0.656 61.7 160.8 85.1 19.1 6.9 5.9 6.2 46 67 A A < - 0 0 4 -5,-2.7 22,-0.2 -6,-0.2 -1,-0.2 -0.427 35.1-157.6 -76.5 147.2 4.0 5.3 3.7 47 68 A D S S+ 0 0 50 20,-1.9 -45,-1.1 1,-0.2 2,-0.4 0.869 78.7 30.7 -86.4 -46.1 0.4 6.6 4.4 48 69 A V E -aC 2 67A 1 19,-2.3 19,-2.5 -47,-0.2 2,-0.6 -0.943 61.2-153.3-124.4 138.7 -1.4 4.2 2.0 49 70 A V E -aC 3 66A 0 -47,-3.0 -45,-2.4 -2,-0.4 2,-0.8 -0.962 17.3-158.7-105.1 114.3 -0.7 0.6 0.9 50 71 A V E -aC 4 65A 1 15,-2.4 15,-2.2 -2,-0.6 2,-1.5 -0.857 10.5-144.0-105.0 98.9 -2.3 0.0 -2.5 51 72 A L E > -aC 5 64A 8 -47,-2.5 2,-1.6 -2,-0.8 -45,-0.9 -0.481 18.8-175.8 -63.2 86.6 -2.9 -3.7 -3.2 52 73 A T T 3 S+ 0 0 45 -2,-1.5 -1,-0.1 11,-0.5 10,-0.1 -0.630 81.3 43.0 -87.2 72.7 -2.2 -3.7 -7.0 53 74 A S T 3 S- 0 0 54 -2,-1.6 2,-0.3 9,-0.1 -1,-0.2 0.017 111.2-117.3 175.6 -37.5 -3.1 -7.3 -7.3 54 75 A G < - 0 0 17 -3,-0.6 2,-0.2 9,-0.2 3,-0.1 -0.828 27.4-112.9 111.0-152.2 -6.2 -7.5 -5.1 55 76 A Q S > S+ 0 0 34 -2,-0.3 3,-1.6 1,-0.1 -24,-0.1 -0.851 73.9 78.5-161.4-171.6 -6.8 -9.5 -1.9 56 77 A T T 3 S- 0 0 91 1,-0.3 3,-0.1 -2,-0.2 -1,-0.1 0.845 118.5 -66.8 61.3 39.0 -8.8 -12.4 -0.3 57 78 A E T 3 S+ 0 0 145 1,-0.2 2,-2.0 -3,-0.1 -1,-0.3 0.563 89.4 153.4 63.8 12.0 -6.5 -15.1 -1.9 58 79 A N S < S- 0 0 113 -3,-1.6 -1,-0.2 1,-0.2 -3,-0.1 -0.486 84.2 -58.2 -81.0 76.4 -7.9 -14.0 -5.4 59 80 A K S S+ 0 0 199 -2,-2.0 2,-0.2 1,-0.2 -1,-0.2 0.768 99.4 150.5 55.9 34.3 -4.8 -15.0 -7.5 60 81 A I + 0 0 15 1,-0.2 -1,-0.2 -5,-0.1 -33,-0.1 -0.644 39.3 179.3 -96.7 147.1 -2.6 -12.7 -5.3 61 82 A H - 0 0 95 -2,-0.2 -33,-0.3 -35,-0.1 -35,-0.2 0.685 62.6 -97.7 -98.5 -51.3 1.1 -13.0 -4.4 62 83 A G + 0 0 2 1,-0.1 -38,-1.8 -35,-0.1 2,-0.5 0.574 62.0 157.2 130.2 51.9 1.1 -9.8 -2.4 63 84 A T E +B 23 0A 53 -40,-0.2 -11,-0.5 -11,-0.1 2,-0.3 -0.897 12.1 170.2-101.9 129.9 2.4 -6.8 -4.5 64 85 A A E -BC 22 51A 0 -42,-2.4 -42,-2.8 -2,-0.5 2,-0.4 -1.000 30.8-131.6-142.7 133.9 1.4 -3.4 -3.4 65 86 A D E -BC 21 50A 27 -15,-2.2 -15,-2.4 -2,-0.3 2,-0.4 -0.752 26.3-138.9 -86.4 130.5 2.4 0.2 -4.4 66 87 A I E -BC 20 49A 6 -46,-2.0 -47,-2.1 -2,-0.4 -46,-1.0 -0.779 21.9-172.7 -97.9 135.1 3.2 2.4 -1.4 67 88 A Y E -BC 18 48A 42 -19,-2.5 -19,-2.3 -2,-0.4 -20,-1.9 -0.934 14.3-148.6-129.2 146.8 2.1 6.1 -1.4 68 89 A K E -B 17 0A 76 -51,-2.2 -51,-2.0 -2,-0.3 2,-0.2 -0.895 26.3-114.5-113.6 147.9 2.6 9.1 0.9 69 90 A K E -B 16 0A 103 -2,-0.3 2,-1.1 -53,-0.2 -53,-0.2 -0.526 26.3-113.6 -83.2 144.4 0.0 11.9 1.4 70 91 A K - 0 0 132 -55,-2.2 2,-0.2 -2,-0.2 -1,-0.1 -0.692 35.2-148.6 -79.7 95.9 0.7 15.5 0.2 71 92 A L - 0 0 126 -2,-1.1 2,-0.2 1,-0.1 -3,-0.0 -0.521 12.1-135.6 -67.8 132.2 0.9 17.4 3.6 72 93 A E - 0 0 121 -2,-0.2 2,-0.2 2,-0.0 4,-0.1 -0.556 15.8-165.9 -94.3 156.8 -0.3 21.0 3.3 73 94 A H - 0 0 144 -2,-0.2 2,-0.3 2,-0.1 3,-0.1 -0.729 69.2 -51.8-149.1 81.6 1.4 24.1 4.8 74 95 A H S S+ 0 0 200 -2,-0.2 2,-1.6 1,-0.2 3,-0.2 0.137 96.7 124.8 73.3 -20.9 -0.8 27.4 4.9 75 96 A H + 0 0 107 -2,-0.3 -1,-0.2 1,-0.2 -2,-0.1 -0.565 30.1 166.7 -67.7 87.2 -1.7 27.1 1.2 76 97 A H - 0 0 159 -2,-1.6 -1,-0.2 2,-0.1 -2,-0.1 0.800 36.1-138.6 -77.4 -29.9 -5.4 27.1 1.9 77 98 A H 0 0 157 1,-0.2 -2,-0.1 -3,-0.2 -3,-0.0 0.997 360.0 360.0 58.4 77.9 -6.4 27.7 -1.8 78 99 A H 0 0 226 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 -0.506 360.0 360.0 65.2 360.0 -9.2 30.3 -1.1