==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JUL-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIGASE 28-JUN-13 2MA6 . COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE RNF123; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.A.RAMELOT,Y.YANG,H.JANJUA,E.KOHAN,H.WANG,R.XIAO,T.B.ACTON, . 61 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4640.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 59.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 21.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 13.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 8 13.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 132 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 155.1 2.0 0.5 0.1 2 2 A H + 0 0 181 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.879 360.0 162.5-136.6 99.6 0.4 1.4 -3.3 3 3 A M - 0 0 114 -2,-0.3 0, 0.0 9,-0.1 0, 0.0 -0.984 25.6-172.2-123.6 120.8 2.9 1.1 -6.2 4 4 A P S S+ 0 0 128 0, 0.0 2,-0.9 0, 0.0 -1,-0.1 0.814 78.4 75.8 -75.4 -31.4 1.9 0.8 -10.0 5 5 A T S S- 0 0 108 2,-0.0 2,-0.2 0, 0.0 3,-0.0 -0.738 71.7-175.4 -86.3 103.5 5.5 0.0 -10.9 6 6 A S - 0 0 56 -2,-0.9 5,-0.0 2,-0.2 3,-0.0 -0.697 36.1-123.4-101.7 155.0 6.1 -3.6 -9.9 7 7 A E S S- 0 0 187 -2,-0.2 2,-0.2 2,-0.0 -1,-0.1 0.816 95.8 -11.2 -65.5 -34.0 9.4 -5.7 -10.1 8 8 A E S S- 0 0 138 -3,-0.0 2,-0.5 3,-0.0 -2,-0.2 -0.538 108.6 -56.0-137.6-156.6 7.6 -8.3 -12.3 9 9 A D S S+ 0 0 51 -2,-0.2 10,-1.3 10,-0.1 2,-0.1 -0.182 77.0 172.8 -81.5 43.3 3.9 -9.0 -13.3 10 10 A L B -A 18 0A 29 -2,-0.5 6,-0.1 8,-0.2 -4,-0.0 -0.332 43.8-104.5 -66.7 125.9 3.2 -9.2 -9.6 11 11 A C >> - 0 0 0 6,-1.9 4,-3.2 1,-0.2 3,-1.9 -0.329 27.4-145.5 -49.7 111.6 -0.5 -9.4 -8.7 12 12 A P T 34 S+ 0 0 75 0, 0.0 -1,-0.2 0, 0.0 -9,-0.1 0.698 96.9 60.1 -62.4 -21.4 -1.3 -5.8 -7.4 13 13 A I T 34 S+ 0 0 81 1,-0.1 -2,-0.1 2,-0.1 17,-0.0 0.768 125.8 14.4 -68.4 -27.5 -3.8 -7.3 -4.8 14 14 A C T <4 S- 0 0 60 -3,-1.9 2,-1.9 3,-0.2 -1,-0.1 0.681 74.1-160.7-125.7 -32.8 -1.0 -9.3 -3.1 15 15 A Y S < S+ 0 0 80 -4,-3.2 -2,-0.1 2,-0.2 -4,-0.1 -0.277 79.4 76.4 68.0 -47.0 2.5 -8.0 -4.3 16 16 A A S S+ 0 0 83 -2,-1.9 -1,-0.2 -6,-0.1 -6,-0.0 0.816 96.9 37.2 -66.5 -37.8 4.3 -11.3 -3.2 17 17 A H S S- 0 0 134 -6,-0.2 -6,-1.9 1,-0.1 -2,-0.2 -0.864 80.1-125.7-118.8 150.9 3.1 -13.6 -6.1 18 18 A P B -A 10 0A 41 0, 0.0 -8,-0.2 0, 0.0 2,-0.2 -0.019 38.9 -71.9 -84.3-173.3 2.7 -12.8 -9.9 19 19 A I + 0 0 27 -10,-1.3 12,-0.3 12,-0.1 41,-0.1 -0.604 53.3 148.3 -80.3 142.5 -0.3 -13.2 -12.4 20 20 A S + 0 0 44 10,-2.1 38,-0.6 1,-0.2 2,-0.4 0.298 57.6 64.1-150.2 -4.0 -1.2 -16.7 -13.6 21 21 A A E -BC 30 57B 0 9,-2.2 9,-1.9 36,-0.3 2,-0.3 -0.995 57.0-158.2-137.6 132.4 -5.1 -16.4 -14.1 22 22 A V E -BC 29 56B 17 34,-2.6 34,-1.7 -2,-0.4 2,-0.8 -0.845 15.5-139.6-106.0 145.9 -7.3 -14.4 -16.5 23 23 A F E >>> -BC 28 55B 1 5,-2.4 4,-2.1 -2,-0.3 5,-0.7 -0.823 40.4-118.4-112.6 88.3 -11.0 -13.7 -15.8 24 24 A Q E 345S+ C 0 54B 92 30,-2.0 29,-1.8 -2,-0.8 30,-1.2 -0.337 80.3 14.2 -75.8 155.8 -12.9 -14.0 -19.1 25 25 A P T 345S+ 0 0 105 0, 0.0 -1,-0.3 0, 0.0 27,-0.1 -0.985 129.7 50.1 -82.3 2.2 -14.6 -12.5 -21.1 26 26 A C T <45S- 0 0 61 -3,-0.5 -2,-0.2 25,-0.2 26,-0.1 0.923 91.5-140.7 -64.4 -49.7 -13.4 -9.3 -19.3 27 27 A G T <5 + 0 0 24 -4,-2.1 -3,-0.2 1,-0.3 -1,-0.1 0.387 45.0 148.7 101.6 -3.1 -9.7 -10.1 -19.4 28 28 A H E < -B 23 0B 67 -5,-0.7 -5,-2.4 -6,-0.1 2,-0.3 -0.383 31.2-155.5 -62.7 145.0 -8.6 -8.8 -15.9 29 29 A K E +B 22 0B 73 -7,-0.2 2,-0.2 -2,-0.1 -7,-0.2 -0.923 27.1 139.7-133.3 147.9 -5.8 -10.8 -14.4 30 30 A S E -B 21 0B 0 -9,-1.9 -9,-2.2 -2,-0.3 -10,-2.1 -0.870 55.6 -50.8-161.2-169.7 -4.3 -11.7 -11.0 31 31 A C >> - 0 0 8 -12,-0.3 3,-1.1 -2,-0.2 4,-0.9 -0.436 46.3-120.2 -74.4 152.0 -2.7 -14.7 -9.1 32 32 A K H 3> S+ 0 0 86 1,-0.2 4,-2.0 2,-0.2 5,-0.2 0.855 113.4 63.5 -58.7 -37.8 -4.6 -18.1 -9.0 33 33 A A H 3> S+ 0 0 70 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.755 96.1 61.9 -58.3 -28.6 -4.7 -17.8 -5.1 34 34 A C H <> S+ 0 0 10 -3,-1.1 4,-2.3 2,-0.2 -1,-0.2 0.985 108.8 36.2 -59.5 -62.1 -6.9 -14.7 -5.5 35 35 A I H X S+ 0 0 2 -4,-0.9 4,-2.1 2,-0.2 -2,-0.2 0.880 114.9 54.9 -66.8 -41.1 -9.9 -16.3 -7.3 36 36 A N H < S+ 0 0 97 -4,-2.0 -1,-0.2 1,-0.2 -2,-0.2 0.906 116.2 38.9 -58.5 -43.7 -9.7 -19.6 -5.3 37 37 A Q H >< S+ 0 0 120 -4,-1.6 3,-1.1 -5,-0.2 -1,-0.2 0.849 114.2 56.4 -71.8 -34.8 -9.9 -17.6 -2.0 38 38 A H H >X S+ 0 0 22 -4,-2.3 4,-1.9 1,-0.3 3,-1.8 0.770 93.4 67.0 -71.0 -28.6 -12.5 -15.2 -3.7 39 39 A L T 3< S+ 0 0 80 -4,-2.1 -1,-0.3 1,-0.3 -2,-0.2 0.576 92.3 62.9 -70.6 -11.2 -14.9 -18.1 -4.6 40 40 A M T <4 S+ 0 0 149 -3,-1.1 -1,-0.3 -5,-0.2 -2,-0.2 0.553 122.4 19.1 -82.1 -14.3 -15.4 -18.5 -0.8 41 41 A N T <4 S- 0 0 112 -3,-1.8 -2,-0.2 1,-0.4 2,-0.1 0.665 130.5 -19.9-116.1 -74.2 -16.9 -14.9 -0.9 42 42 A N < - 0 0 86 -4,-1.9 -1,-0.4 2,-0.1 0, 0.0 -0.444 43.1-129.7-125.3-168.1 -18.0 -13.8 -4.4 43 43 A K + 0 0 155 -2,-0.1 9,-2.0 -3,-0.1 2,-0.1 -0.001 63.1 130.0-134.7 24.6 -17.5 -14.7 -8.2 44 44 A D B -D 51 0C 20 7,-0.2 2,-0.4 -6,-0.2 7,-0.2 -0.381 69.8-110.6 -87.6 165.1 -16.7 -11.1 -9.3 45 45 A C > - 0 0 1 5,-1.8 2,-1.0 1,-0.2 3,-0.7 -0.140 38.2-141.7 -94.2 36.1 -13.8 -9.8 -11.4 46 46 A F T 3 S+ 0 0 50 -2,-0.4 -1,-0.2 1,-0.3 -2,-0.0 -0.180 90.5 50.0 54.2 -82.4 -12.1 -7.8 -8.6 47 47 A F T 3 S+ 0 0 87 -2,-1.0 -1,-0.3 1,-0.2 -2,-0.0 0.519 135.8 10.9 -70.7 -12.0 -10.8 -4.6 -10.4 48 48 A C S < S- 0 0 56 -3,-0.7 -1,-0.2 2,-0.1 -2,-0.2 0.341 95.0-126.5-143.1 -7.1 -14.3 -3.9 -12.1 49 49 A K + 0 0 151 1,-0.2 -3,-0.1 -5,-0.0 2,-0.1 0.672 54.4 154.6 63.0 22.8 -16.6 -6.4 -10.1 50 50 A T - 0 0 66 -5,-0.2 -5,-1.8 -6,-0.1 2,-0.3 -0.431 55.7 -89.8 -73.1 151.8 -17.9 -8.0 -13.4 51 51 A T B -D 44 0C 109 -7,-0.2 2,-0.8 -2,-0.1 -25,-0.2 -0.519 37.3-137.1 -63.4 120.5 -19.2 -11.6 -13.5 52 52 A I - 0 0 20 -9,-2.0 3,-0.2 -2,-0.3 -28,-0.1 -0.784 23.3-179.7 -79.9 111.4 -16.3 -14.0 -14.2 53 53 A V S S+ 0 0 107 -29,-1.8 2,-0.3 -2,-0.8 -1,-0.2 0.904 71.5 8.9 -75.6 -46.0 -17.8 -16.6 -16.7 54 54 A S E -C 24 0B 51 -30,-1.2 -30,-2.0 2,-0.0 2,-0.7 -0.999 59.9-150.6-141.9 134.4 -14.5 -18.6 -16.9 55 55 A V E +C 23 0B 51 -2,-0.3 2,-0.3 -32,-0.2 -32,-0.2 -0.909 29.5 178.5-102.3 104.1 -11.1 -18.5 -15.0 56 56 A E E -C 22 0B 96 -34,-1.7 -34,-2.6 -2,-0.7 2,-0.8 -0.699 37.1-102.3-105.0 156.8 -8.4 -19.7 -17.4 57 57 A D E -C 21 0B 97 -2,-0.3 2,-0.7 -36,-0.2 -36,-0.3 -0.730 34.1-144.0 -78.8 108.1 -4.6 -20.0 -16.8 58 58 A W - 0 0 92 -2,-0.8 2,-0.4 -38,-0.6 -1,-0.0 -0.707 12.4-147.3 -74.9 112.0 -3.0 -16.9 -18.5 59 59 A E - 0 0 162 -2,-0.7 -39,-0.1 1,-0.1 -38,-0.0 -0.700 9.3-161.5 -79.3 131.2 0.3 -18.1 -19.9 60 60 A K 0 0 113 -2,-0.4 -1,-0.1 -41,-0.1 -2,-0.0 0.300 360.0 360.0 -95.3 6.3 3.0 -15.4 -19.9 61 61 A G 0 0 125 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.883 360.0 360.0-178.4 360.0 5.1 -17.2 -22.5