==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-FEB-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 19-MAY-95 1MBE . COMPND 2 MOLECULE: MYB PROTO-ONCOGENE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.OGATA,S.MORIKAWA,H.NAKAMURA,H.HOJO,S.YOSHIMURA,R.ZHANG,S.A . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4296.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 69.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 44.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 38 A L 0 0 218 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 158.9 3.1 -7.0 -9.5 2 39 A G > - 0 0 43 3,-0.0 3,-2.1 0, 0.0 2,-0.3 -0.111 360.0-158.4-177.8 63.3 6.8 -7.3 -10.2 3 40 A K T 3 S- 0 0 175 1,-0.3 3,-0.1 3,-0.0 0, 0.0 -0.361 85.1 -25.4 -56.0 113.0 9.0 -6.3 -7.2 4 41 A T T 3 S- 0 0 92 -2,-0.3 -1,-0.3 1,-0.2 0, 0.0 0.834 93.0-165.0 45.6 40.3 12.4 -5.5 -8.9 5 42 A R < - 0 0 185 -3,-2.1 2,-0.2 1,-0.1 -1,-0.2 -0.281 7.0-137.7 -56.8 135.4 11.3 -7.9 -11.7 6 43 A W - 0 0 29 -3,-0.1 2,-0.3 4,-0.0 -1,-0.1 -0.623 13.4-155.8 -96.3 156.4 14.3 -8.9 -13.9 7 44 A T >> - 0 0 68 -2,-0.2 4,-2.6 1,-0.1 3,-0.7 -0.925 29.0-116.1-130.4 154.6 14.3 -9.1 -17.7 8 45 A R H 3> S+ 0 0 175 -2,-0.3 4,-2.2 1,-0.3 5,-0.2 0.868 116.5 58.8 -57.0 -38.7 16.5 -11.1 -20.1 9 46 A E H 3> S+ 0 0 142 1,-0.2 4,-0.9 2,-0.2 -1,-0.3 0.864 111.1 41.8 -59.1 -36.6 17.8 -7.8 -21.6 10 47 A E H <> S+ 0 0 44 -3,-0.7 4,-2.5 2,-0.2 3,-0.3 0.880 109.0 58.1 -77.3 -40.3 19.0 -6.9 -18.1 11 48 A D H X S+ 0 0 24 -4,-2.6 4,-3.0 1,-0.2 -2,-0.2 0.860 102.3 56.4 -57.5 -36.7 20.3 -10.5 -17.4 12 49 A E H X S+ 0 0 65 -4,-2.2 4,-2.7 2,-0.2 -1,-0.2 0.902 107.9 47.4 -61.9 -41.6 22.5 -10.1 -20.5 13 50 A K H X S+ 0 0 82 -4,-0.9 4,-2.5 -3,-0.3 -2,-0.2 0.946 113.8 46.7 -64.5 -48.8 24.1 -6.9 -19.0 14 51 A L H X S+ 0 0 1 -4,-2.5 4,-2.6 2,-0.2 -2,-0.2 0.925 113.2 50.3 -58.0 -46.8 24.7 -8.6 -15.6 15 52 A K H X S+ 0 0 59 -4,-3.0 4,-3.0 1,-0.2 5,-0.3 0.944 110.6 48.5 -56.3 -53.0 26.1 -11.7 -17.4 16 53 A K H X S+ 0 0 143 -4,-2.7 4,-2.5 1,-0.2 -1,-0.2 0.902 112.8 48.3 -55.9 -45.5 28.5 -9.6 -19.5 17 54 A L H X S+ 0 0 25 -4,-2.5 4,-2.9 2,-0.2 5,-0.5 0.891 113.4 47.2 -64.2 -40.8 29.7 -7.7 -16.4 18 55 A V H < S+ 0 0 11 -4,-2.6 -2,-0.2 2,-0.2 -1,-0.2 0.931 114.0 46.7 -66.3 -46.3 30.2 -10.9 -14.4 19 56 A E H < S+ 0 0 136 -4,-3.0 -2,-0.2 -5,-0.2 -1,-0.2 0.891 115.8 47.3 -61.6 -40.7 32.1 -12.6 -17.3 20 57 A Q H < S+ 0 0 132 -4,-2.5 -2,-0.2 -5,-0.3 -1,-0.2 0.969 134.7 8.0 -64.7 -57.3 34.2 -9.4 -17.7 21 58 A N S < S- 0 0 83 -4,-2.9 2,-0.2 -5,-0.2 -3,-0.2 0.920 100.3-122.2 -90.1 -79.1 35.0 -8.9 -14.0 22 59 A G - 0 0 23 -5,-0.5 2,-1.3 3,-0.1 -1,-0.1 -0.835 37.0 -62.7 150.3 174.8 33.9 -11.9 -11.9 23 60 A T S S+ 0 0 80 -2,-0.2 3,-0.2 -4,-0.1 -5,-0.1 -0.262 95.2 113.5 -83.8 49.0 31.7 -12.8 -8.9 24 61 A D S S- 0 0 131 -2,-1.3 2,-0.6 1,-0.3 -2,-0.0 0.388 77.8 -1.9 -90.4-134.1 33.9 -10.6 -6.7 25 62 A D >> - 0 0 102 1,-0.2 3,-1.4 2,-0.1 4,-0.8 -0.460 62.2-159.7 -61.9 107.7 32.8 -7.4 -5.0 26 63 A W H 3> S+ 0 0 14 -2,-0.6 4,-2.8 1,-0.3 -1,-0.2 0.644 84.1 77.2 -65.9 -13.8 29.2 -7.1 -6.2 27 64 A K H 3> S+ 0 0 110 2,-0.2 4,-2.4 1,-0.2 -1,-0.3 0.883 91.4 53.1 -62.2 -38.3 29.4 -3.4 -5.3 28 65 A V H <> S+ 0 0 63 -3,-1.4 4,-1.3 2,-0.2 -1,-0.2 0.944 112.1 43.0 -61.5 -50.0 31.4 -2.9 -8.5 29 66 A I H X S+ 0 0 2 -4,-0.8 4,-1.2 1,-0.2 3,-0.3 0.906 113.2 53.0 -63.1 -42.6 28.8 -4.6 -10.7 30 67 A A H < S+ 0 0 14 -4,-2.8 3,-0.4 1,-0.2 -1,-0.2 0.883 103.3 57.5 -60.4 -39.7 26.0 -2.7 -8.8 31 68 A N H < S+ 0 0 131 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.868 109.6 44.8 -59.1 -36.9 27.8 0.6 -9.5 32 69 A Y H < S+ 0 0 146 -4,-1.3 -1,-0.3 -3,-0.3 -2,-0.2 0.695 114.4 53.4 -79.7 -20.2 27.6 -0.2 -13.2 33 70 A L S >< S- 0 0 21 -4,-1.2 3,-0.6 -3,-0.4 -1,-0.2 -0.781 83.7-153.5-118.0 85.5 23.9 -1.3 -12.9 34 71 A P T 3 S+ 0 0 89 0, 0.0 2,-1.6 0, 0.0 -3,-0.1 -0.149 79.6 18.1 -54.9 152.4 22.0 1.5 -11.1 35 72 A N T 3 S+ 0 0 147 1,-0.1 2,-1.4 -4,-0.0 5,-0.1 -0.206 104.1 96.1 77.0 -44.6 18.8 0.4 -9.2 36 73 A R < - 0 0 17 -2,-1.6 -3,-0.2 -3,-0.6 -1,-0.1 -0.632 69.8-157.6 -79.8 92.6 20.2 -3.1 -9.1 37 74 A T > - 0 0 67 -2,-1.4 4,-2.8 1,-0.1 5,-0.2 -0.073 33.3 -98.1 -63.0 169.1 22.0 -3.2 -5.7 38 75 A D H > S+ 0 0 46 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.853 127.4 54.7 -58.3 -35.4 24.8 -5.7 -4.9 39 76 A V H > S+ 0 0 68 2,-0.2 4,-2.9 1,-0.2 5,-0.3 0.938 109.8 45.2 -63.6 -48.4 22.1 -7.8 -3.2 40 77 A Q H > S+ 0 0 36 2,-0.2 4,-2.9 1,-0.2 5,-0.2 0.936 116.2 45.9 -60.5 -49.4 20.0 -7.9 -6.4 41 78 A C H X S+ 0 0 0 -4,-2.8 4,-2.0 2,-0.2 5,-0.2 0.943 115.7 45.9 -59.6 -51.2 23.0 -8.6 -8.7 42 79 A Q H X>S+ 0 0 71 -4,-2.9 4,-1.8 -5,-0.2 5,-0.7 0.957 117.1 43.2 -57.1 -56.3 24.4 -11.3 -6.4 43 80 A H H X5S+ 0 0 97 -4,-2.9 4,-2.0 1,-0.2 5,-0.5 0.952 111.5 53.7 -55.2 -55.8 21.0 -13.0 -5.9 44 81 A R H <>S+ 0 0 67 -4,-2.9 5,-1.7 -5,-0.3 -1,-0.2 0.854 122.9 29.6 -49.9 -40.0 20.0 -12.8 -9.5 45 82 A W H ><5S+ 0 0 24 -4,-2.0 3,-1.7 3,-0.2 -2,-0.2 0.956 126.1 35.3 -84.9 -75.5 23.3 -14.5 -10.5 46 83 A Q H 3<5S+ 0 0 89 -4,-1.8 -3,-0.2 1,-0.3 -2,-0.1 0.792 123.9 46.0 -52.3 -33.7 24.5 -16.9 -7.7 47 84 A K T 3<