==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-FEB-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 19-MAY-95 1MBF . COMPND 2 MOLECULE: MYB PROTO-ONCOGENE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.OGATA,S.MORIKAWA,H.NAKAMURA,H.HOJO,S.YOSHIMURA,R.ZHANG,S.A . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4403.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 63.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 9.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 42.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 38 A L 0 0 233 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 158.9 3.8 -15.3 -9.6 2 39 A G - 0 0 67 1,-0.1 2,-0.3 2,-0.1 0, 0.0 -0.100 360.0-112.9 76.1-179.4 7.5 -14.6 -9.1 3 40 A K S S- 0 0 179 1,-0.0 3,-0.1 3,-0.0 -1,-0.1 -0.941 80.8 -9.0-157.4 132.5 8.9 -11.6 -7.2 4 41 A T S S- 0 0 117 -2,-0.3 -2,-0.1 1,-0.1 -1,-0.0 0.896 86.5-158.9 42.9 51.5 11.0 -8.6 -8.3 5 42 A R - 0 0 227 1,-0.1 2,-0.2 0, 0.0 -1,-0.1 -0.150 1.5-139.0 -58.6 154.1 11.3 -10.3 -11.7 6 43 A W - 0 0 35 -3,-0.1 2,-0.3 3,-0.0 -1,-0.1 -0.441 9.5-120.6-105.2-179.2 14.1 -9.3 -14.1 7 44 A T > - 0 0 71 -2,-0.2 4,-2.5 1,-0.1 3,-0.4 -0.921 22.1-117.1-126.1 151.7 14.3 -8.7 -17.9 8 45 A R H > S+ 0 0 170 -2,-0.3 4,-2.8 1,-0.2 5,-0.2 0.828 114.5 59.0 -55.9 -35.3 16.5 -10.5 -20.5 9 46 A E H > S+ 0 0 160 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.938 110.8 40.2 -59.5 -48.4 18.2 -7.1 -21.3 10 47 A E H > S+ 0 0 34 -3,-0.4 4,-3.0 2,-0.2 -2,-0.2 0.865 113.8 54.7 -69.5 -37.5 19.4 -6.8 -17.7 11 48 A D H X S+ 0 0 7 -4,-2.5 4,-2.9 2,-0.2 -2,-0.2 0.950 111.9 43.2 -60.1 -50.8 20.2 -10.6 -17.5 12 49 A E H X S+ 0 0 125 -4,-2.8 4,-2.6 2,-0.2 -2,-0.2 0.929 115.0 50.2 -60.1 -47.4 22.5 -10.3 -20.5 13 50 A K H X S+ 0 0 77 -4,-2.3 4,-2.3 -5,-0.2 -2,-0.2 0.918 113.2 46.0 -56.9 -47.7 24.0 -7.1 -19.3 14 51 A L H X S+ 0 0 1 -4,-3.0 4,-3.1 2,-0.2 5,-0.2 0.950 111.5 51.3 -61.8 -51.5 24.7 -8.6 -15.9 15 52 A K H X S+ 0 0 57 -4,-2.9 4,-2.7 1,-0.2 5,-0.3 0.918 111.1 48.7 -51.4 -50.2 26.1 -11.8 -17.3 16 53 A K H X S+ 0 0 122 -4,-2.6 4,-2.7 1,-0.2 -1,-0.2 0.946 114.5 44.1 -56.5 -53.7 28.5 -9.8 -19.6 17 54 A L H X>S+ 0 0 26 -4,-2.3 4,-2.9 2,-0.2 5,-0.7 0.905 114.0 50.3 -60.1 -44.7 29.7 -7.6 -16.7 18 55 A V H X5S+ 0 0 0 -4,-3.1 4,-1.5 1,-0.2 -1,-0.2 0.928 116.9 39.5 -61.0 -47.9 30.1 -10.5 -14.3 19 56 A E H <5S+ 0 0 103 -4,-2.7 -1,-0.2 -5,-0.2 -2,-0.2 0.849 118.1 50.4 -70.7 -35.2 32.1 -12.6 -16.8 20 57 A Q H <5S+ 0 0 120 -4,-2.7 -2,-0.2 -5,-0.3 -3,-0.2 0.965 128.5 17.9 -67.4 -56.3 34.1 -9.6 -18.0 21 58 A N H <5S- 0 0 88 -4,-2.9 -3,-0.2 -5,-0.2 -2,-0.2 0.884 115.5-108.2 -84.9 -44.0 35.2 -8.2 -14.7 22 59 A G << - 0 0 27 -4,-1.5 2,-1.8 -5,-0.7 -1,-0.2 -0.369 29.8 -79.3 125.9 155.2 34.7 -11.3 -12.5 23 60 A T S S+ 0 0 69 -2,-0.1 3,-0.1 -4,-0.1 -5,-0.1 -0.293 90.6 118.4 -81.8 52.7 32.2 -12.4 -9.8 24 61 A D + 0 0 127 -2,-1.8 2,-0.2 1,-0.3 -2,-0.1 0.382 69.2 3.6 -90.4-135.5 34.1 -10.3 -7.2 25 62 A D > - 0 0 74 1,-0.2 4,-1.3 2,-0.1 3,-0.5 -0.336 57.8-157.0 -55.2 117.0 32.7 -7.4 -5.2 26 63 A W H > S+ 0 0 18 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.643 89.8 71.1 -71.1 -13.7 29.0 -7.1 -6.1 27 64 A K H > S+ 0 0 122 2,-0.2 4,-1.5 1,-0.2 -1,-0.2 0.931 98.9 45.5 -65.4 -46.6 29.3 -3.4 -5.0 28 65 A V H > S+ 0 0 57 -3,-0.5 4,-0.8 1,-0.2 -2,-0.2 0.908 115.6 46.9 -62.6 -44.2 31.4 -2.6 -8.1 29 66 A I H >X S+ 0 0 2 -4,-1.3 3,-1.1 1,-0.2 4,-1.0 0.911 106.3 58.0 -65.5 -43.5 29.1 -4.5 -10.4 30 67 A A H >< S+ 0 0 16 -4,-2.7 3,-0.6 1,-0.3 -1,-0.2 0.858 98.5 61.0 -55.1 -37.5 26.0 -2.9 -8.8 31 68 A N H 3< S+ 0 0 116 -4,-1.5 -1,-0.3 1,-0.3 -2,-0.2 0.849 105.6 47.1 -58.8 -34.6 27.5 0.5 -9.8 32 69 A Y H << S+ 0 0 102 -3,-1.1 -1,-0.3 -4,-0.8 -2,-0.2 0.687 113.9 51.3 -79.8 -19.8 27.3 -0.6 -13.4 33 70 A L S X< S- 0 0 0 -4,-1.0 3,-0.8 -3,-0.6 -1,-0.2 -0.751 83.9-155.7-120.2 81.9 23.7 -1.8 -12.9 34 71 A P T 3 S+ 0 0 94 0, 0.0 2,-1.4 0, 0.0 -3,-0.1 -0.146 79.3 17.7 -54.3 151.7 21.7 1.0 -11.3 35 72 A N T 3 S+ 0 0 166 1,-0.1 2,-1.3 -4,-0.0 -4,-0.1 -0.137 103.0 99.4 75.4 -40.4 18.6 -0.0 -9.3 36 73 A R < - 0 0 48 -2,-1.4 -3,-0.2 -3,-0.8 -1,-0.1 -0.646 69.6-153.5 -79.8 95.0 20.1 -3.6 -9.1 37 74 A T > - 0 0 68 -2,-1.3 4,-2.9 1,-0.1 5,-0.2 -0.154 29.5-100.3 -64.3 164.4 21.6 -3.6 -5.6 38 75 A D H > S+ 0 0 74 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.883 124.9 51.9 -53.3 -43.6 24.6 -5.8 -4.8 39 76 A V H > S+ 0 0 61 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.917 112.0 45.3 -60.8 -45.9 22.2 -8.3 -3.1 40 77 A Q H > S+ 0 0 70 2,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.903 113.4 49.7 -66.2 -42.2 19.9 -8.5 -6.2 41 78 A C H < S+ 0 0 0 -4,-2.9 -2,-0.2 2,-0.2 -1,-0.2 0.923 113.1 46.9 -62.2 -45.0 22.8 -8.8 -8.6 42 79 A Q H >X S+ 0 0 72 -4,-2.7 4,-2.2 -5,-0.2 3,-1.2 0.931 111.9 50.1 -61.9 -47.0 24.3 -11.6 -6.5 43 80 A H H 3< S+ 0 0 106 -4,-2.7 2,-0.3 1,-0.3 -1,-0.2 0.859 104.7 60.0 -59.5 -35.9 20.9 -13.3 -6.3 44 81 A R T 3< S+ 0 0 62 -4,-2.2 -1,-0.3 -5,-0.2 -2,-0.1 -0.096 123.8 17.4 -85.5 38.0 20.7 -12.9 -10.1 45 82 A W T X4 S+ 0 0 27 -3,-1.2 2,-1.4 -2,-0.3 3,-0.9 0.096 119.1 51.7-161.9 -67.5 23.9 -15.0 -10.4 46 83 A Q T 3< S+ 0 0 115 -4,-2.2 -2,-0.1 1,-0.2 -3,-0.1 -0.141 121.9 38.9 -78.6 42.2 24.9 -17.2 -7.5 47 84 A K T 3 S+ 0 0 169 -2,-1.4 -1,-0.2 2,-0.2 -3,-0.1 0.336 134.6 2.4-161.2 -18.7 21.4 -18.6 -7.4 48 85 A V S < S+ 0 0 87 -3,-0.9 -4,-0.1 1,-0.3 -2,-0.1 0.447 100.3 81.5-142.0 -66.1 20.3 -19.0 -11.1 49 86 A L + 0 0 49 1,-0.1 -1,-0.3 2,-0.0 -2,-0.2 -0.277 43.9 159.1 -57.3 135.2 22.8 -18.2 -13.9 50 87 A N - 0 0 104 -3,-0.1 2,-1.7 -4,-0.1 -1,-0.1 -0.523 22.9-164.7-160.7 83.0 25.3 -21.1 -14.5 51 88 A P 0 0 84 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.552 360.0 360.0 -74.3 86.7 27.1 -21.1 -17.9 52 89 A E 0 0 198 -2,-1.7 0, 0.0 0, 0.0 0, 0.0 0.870 360.0 360.0 -64.6 360.0 28.4 -24.7 -17.8