==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-FEB-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 19-MAY-95 1MBH . COMPND 2 MOLECULE: C-MYB; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.OGATA,S.MORIKAWA,H.NAKAMURA,H.HOJO,S.YOSHIMURA,R.ZHANG,S.A . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3869.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 67.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 44.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 90 A L 0 0 218 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 172.6 9.8 0.0 -8.4 2 91 A I - 0 0 77 1,-0.1 2,-2.7 2,-0.0 33,-0.1 -0.128 360.0 -68.4 -79.8-178.4 12.8 -1.5 -10.3 3 92 A K S S- 0 0 112 1,-0.1 3,-0.2 4,-0.0 7,-0.1 -0.399 89.7 -78.7 -74.5 68.2 12.8 -2.6 -13.9 4 93 A G S S- 0 0 41 -2,-2.7 2,-2.4 1,-0.2 3,-0.1 0.100 79.3 -42.1 61.7-179.9 10.5 -5.6 -13.2 5 94 A P S S- 0 0 130 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 -0.439 110.5 -62.1 -77.9 66.1 11.5 -8.9 -11.6 6 95 A W - 0 0 38 -2,-2.4 2,-0.3 -3,-0.2 3,-0.0 0.455 59.6-140.2 64.8 150.2 14.7 -9.0 -13.7 7 96 A T > - 0 0 44 -3,-0.1 4,-3.0 1,-0.1 5,-0.2 -0.947 25.3-110.2-139.3 158.1 14.8 -9.1 -17.6 8 97 A K H > S+ 0 0 168 -2,-0.3 4,-2.6 1,-0.2 5,-0.1 0.865 120.3 53.9 -55.7 -38.2 16.9 -11.0 -20.2 9 98 A E H > S+ 0 0 79 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.940 111.4 43.2 -61.6 -49.6 18.4 -7.6 -21.1 10 99 A E H > S+ 0 0 14 1,-0.2 4,-1.8 2,-0.2 3,-0.4 0.917 114.5 50.8 -63.3 -44.6 19.5 -6.8 -17.5 11 100 A D H X S+ 0 0 9 -4,-3.0 4,-2.8 1,-0.2 -1,-0.2 0.889 103.0 60.1 -60.2 -41.4 20.7 -10.4 -17.1 12 101 A Q H X S+ 0 0 96 -4,-2.6 4,-1.8 1,-0.2 -1,-0.2 0.870 105.3 49.5 -55.6 -38.6 22.8 -10.1 -20.3 13 102 A R H X S+ 0 0 133 -4,-1.3 4,-3.0 -3,-0.4 -1,-0.2 0.943 110.0 49.6 -66.1 -48.5 24.7 -7.2 -18.7 14 103 A V H X S+ 0 0 0 -4,-1.8 4,-2.8 1,-0.2 5,-0.3 0.923 108.0 54.7 -56.0 -47.6 25.3 -9.2 -15.4 15 104 A I H X S+ 0 0 63 -4,-2.8 4,-2.3 1,-0.2 -1,-0.2 0.931 113.6 40.8 -51.5 -52.3 26.6 -12.1 -17.5 16 105 A E H X S+ 0 0 76 -4,-1.8 4,-2.7 2,-0.2 -2,-0.2 0.936 114.2 51.6 -64.1 -48.4 29.2 -9.9 -19.3 17 106 A L H X>S+ 0 0 24 -4,-3.0 4,-3.0 1,-0.2 5,-0.6 0.861 111.9 47.7 -58.8 -36.7 30.1 -7.9 -16.1 18 107 A V H <5S+ 0 0 2 -4,-2.8 -1,-0.2 -5,-0.2 -2,-0.2 0.914 112.2 48.9 -70.0 -42.7 30.7 -11.2 -14.3 19 108 A Q H <5S+ 0 0 147 -4,-2.3 -2,-0.2 -5,-0.3 -1,-0.2 0.867 116.8 44.4 -61.5 -37.4 32.8 -12.5 -17.2 20 109 A K H <5S+ 0 0 134 -4,-2.7 -2,-0.2 -5,-0.1 -3,-0.2 0.969 136.4 7.3 -72.4 -57.8 34.7 -9.2 -17.2 21 110 A Y T <5S- 0 0 92 -4,-3.0 -3,-0.2 1,-0.2 -2,-0.1 0.930 107.2-105.1 -89.8 -72.2 35.3 -8.8 -13.4 22 111 A G < - 0 0 14 -5,-0.6 2,-0.6 2,-0.3 -1,-0.2 -0.909 43.3 -59.3 160.7 177.6 34.2 -12.0 -11.7 23 112 A P S S+ 0 0 44 0, 0.0 2,-0.2 0, 0.0 3,-0.1 0.024 117.5 57.2 -74.3 30.6 31.3 -13.4 -9.5 24 113 A K + 0 0 133 -2,-0.6 -2,-0.3 1,-0.1 5,-0.2 -0.612 61.9 75.7-139.0-163.1 32.2 -10.7 -6.9 25 114 A R > + 0 0 162 -2,-0.2 4,-2.2 1,-0.1 3,-0.5 0.926 49.2 169.7 52.7 49.5 32.4 -6.9 -6.8 26 115 A W H > S+ 0 0 33 1,-0.2 4,-2.6 2,-0.2 5,-0.1 0.729 72.6 62.3 -64.7 -20.9 28.6 -6.6 -6.7 27 116 A S H > S+ 0 0 93 2,-0.2 4,-2.1 3,-0.2 -1,-0.2 0.913 106.1 44.1 -68.2 -43.1 29.1 -2.9 -5.8 28 117 A V H > S+ 0 0 47 -3,-0.5 4,-1.1 2,-0.2 -2,-0.2 0.934 115.2 47.8 -65.8 -47.9 30.8 -2.4 -9.2 29 118 A I H >X S+ 0 0 0 -4,-2.2 4,-2.4 1,-0.2 3,-0.8 0.927 113.1 48.3 -59.3 -46.6 28.2 -4.5 -11.1 30 119 A A H 3< S+ 0 0 15 -4,-2.6 5,-0.3 1,-0.2 -1,-0.2 0.878 102.8 63.4 -61.1 -38.8 25.4 -2.6 -9.3 31 120 A K H 3< S+ 0 0 159 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.826 110.4 39.1 -54.0 -34.3 27.1 0.7 -10.2 32 121 A H H << S+ 0 0 89 -4,-1.1 2,-2.1 -3,-0.8 -2,-0.2 0.883 107.0 64.3 -84.2 -43.1 26.6 -0.2 -13.8 33 122 A L S >< S- 0 0 10 -4,-2.4 3,-1.6 -5,-0.1 2,-1.1 -0.500 80.6-163.2 -80.9 71.4 23.1 -1.7 -13.3 34 123 A K T 3 S+ 0 0 195 -2,-2.1 3,-0.1 1,-0.2 -3,-0.1 -0.422 76.6 38.1 -61.3 96.1 21.6 1.7 -12.2 35 124 A G T 3 S+ 0 0 44 -2,-1.1 -1,-0.2 1,-0.8 2,-0.1 -0.187 104.5 68.1 154.7 -46.4 18.4 0.4 -10.6 36 125 A R < - 0 0 10 -3,-1.6 -1,-0.8 -6,-0.2 2,-0.3 -0.401 67.8-144.7 -91.5 172.5 19.4 -2.8 -8.9 37 126 A I > - 0 0 88 -2,-0.1 4,-2.5 -3,-0.1 3,-0.3 -0.829 36.2 -82.3-134.8 172.1 21.7 -3.1 -5.8 38 127 A G H > S+ 0 0 29 -2,-0.3 4,-2.5 1,-0.2 5,-0.2 0.794 124.7 52.5 -43.6 -42.4 24.4 -5.5 -4.5 39 128 A K H > S+ 0 0 104 2,-0.2 4,-3.1 1,-0.2 -1,-0.2 0.967 112.9 42.1 -63.4 -54.4 21.8 -7.9 -3.0 40 129 A Q H > S+ 0 0 57 -3,-0.3 4,-3.0 2,-0.2 5,-0.2 0.935 115.7 49.5 -57.8 -51.4 19.7 -8.3 -6.2 41 130 A C H X S+ 0 0 0 -4,-2.5 4,-1.4 1,-0.2 -1,-0.2 0.925 115.5 43.7 -54.8 -49.2 22.8 -8.6 -8.4 42 131 A R H X S+ 0 0 76 -4,-2.5 4,-3.1 -5,-0.3 3,-0.4 0.959 115.0 48.5 -61.1 -53.9 24.3 -11.2 -6.1 43 132 A E H < S+ 0 0 68 -4,-3.1 5,-0.2 1,-0.2 -2,-0.2 0.938 106.1 56.1 -52.4 -56.3 21.0 -13.1 -5.7 44 133 A R H >X>S+ 0 0 54 -4,-3.0 5,-1.1 1,-0.2 4,-1.0 0.849 117.3 37.1 -45.6 -42.0 20.3 -13.2 -9.4 45 134 A W H 3<5S+ 0 0 3 -4,-1.4 2,-0.6 -3,-0.4 -2,-0.2 0.950 112.1 54.3 -78.6 -53.2 23.6 -14.9 -10.0 46 135 A H T 3<5S+ 0 0 75 -4,-3.1 -1,-0.2 -5,-0.2 -2,-0.2 0.057 115.0 43.8 -75.6 30.6 23.9 -17.2 -6.9 47 136 A N T <45S- 0 0 91 -2,-0.6 -2,-0.2 -3,-0.5 3,-0.1 0.472 132.6 -12.8-129.6 -75.2 20.5 -18.8 -7.8 48 137 A H T <5S+ 0 0 116 -4,-1.0 2,-1.8 -5,-0.2 -3,-0.1 0.871 122.7 60.6-100.7 -63.1 20.0 -19.6 -11.5 49 138 A L < + 0 0 44 -5,-1.1 -1,-0.2 1,-0.1 3,-0.1 -0.510 65.2 129.4 -73.8 85.1 22.7 -17.9 -13.5 50 139 A N + 0 0 86 -2,-1.8 -1,-0.1 -3,-0.1 -5,-0.0 -0.445 5.2 143.3-137.7 64.1 25.8 -19.6 -12.0 51 140 A P 0 0 99 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.817 360.0 360.0 -67.4 -31.0 28.0 -21.1 -14.8 52 141 A E 0 0 134 -3,-0.1 -2,-0.1 -30,-0.0 -3,-0.0 0.918 360.0 360.0 -56.9 360.0 31.0 -20.1 -12.6