==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-FEB-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 19-MAY-95 1MBJ . COMPND 2 MOLECULE: MYB PROTO-ONCOGENE PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR K.OGATA,S.MORIKAWA,H.NAKAMURA,H.HOJO,S.YOSHIMURA,R.ZHANG,S.A . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4130.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 34 65.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 42.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 142 A V 0 0 192 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 152.4 0.6 -10.1 -17.0 2 143 A K - 0 0 182 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.414 360.0-145.6 -66.9 139.9 3.7 -7.9 -16.3 3 144 A K + 0 0 144 -2,-0.1 -1,-0.1 1,-0.0 4,-0.0 0.987 49.3 135.6 -68.7 -61.4 7.0 -9.8 -16.7 4 145 A T + 0 0 102 1,-0.1 -1,-0.0 0, 0.0 0, 0.0 0.039 22.1 102.7 42.9-153.4 9.0 -8.0 -13.9 5 146 A S S S- 0 0 100 2,-0.0 -1,-0.1 0, 0.0 0, 0.0 0.933 112.6 -30.1 44.9 64.4 11.1 -10.3 -11.6 6 147 A W S S- 0 0 36 4,-0.0 2,-0.1 5,-0.0 0, 0.0 0.828 81.7-117.5 62.5 115.8 14.4 -9.4 -13.3 7 148 A T > - 0 0 58 1,-0.1 4,-2.0 4,-0.0 5,-0.1 -0.397 17.8-115.6 -80.1 159.2 14.1 -8.6 -17.0 8 149 A E H > S+ 0 0 104 1,-0.2 4,-1.7 2,-0.2 -1,-0.1 0.841 117.6 53.0 -61.2 -34.8 15.8 -10.6 -19.7 9 150 A E H > S+ 0 0 111 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.929 105.4 52.3 -68.4 -45.7 18.0 -7.5 -20.6 10 151 A E H > S+ 0 0 34 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.911 107.3 53.7 -55.6 -44.0 19.1 -7.1 -17.0 11 152 A D H X S+ 0 0 40 -4,-2.0 4,-2.8 1,-0.2 -1,-0.2 0.915 108.8 48.7 -57.1 -45.0 20.2 -10.8 -16.9 12 153 A R H X S+ 0 0 123 -4,-1.7 4,-2.8 2,-0.2 5,-0.2 0.907 110.7 51.3 -61.8 -43.0 22.3 -10.1 -20.1 13 154 A I H X S+ 0 0 69 -4,-2.4 4,-2.5 2,-0.2 5,-0.2 0.954 114.0 42.5 -59.0 -52.9 23.9 -7.0 -18.5 14 155 A I H X S+ 0 0 0 -4,-2.7 4,-3.0 1,-0.2 5,-0.2 0.914 114.5 51.8 -61.2 -45.1 24.9 -8.9 -15.3 15 156 A Y H X S+ 0 0 94 -4,-2.8 4,-2.7 -5,-0.2 -2,-0.2 0.945 112.0 45.0 -57.3 -52.5 26.0 -11.9 -17.3 16 157 A Q H X S+ 0 0 116 -4,-2.8 4,-1.5 1,-0.2 -1,-0.2 0.934 118.0 43.2 -57.9 -50.0 28.3 -9.9 -19.6 17 158 A A H X>S+ 0 0 7 -4,-2.5 4,-3.1 -5,-0.2 5,-0.6 0.871 115.6 49.2 -65.3 -38.5 29.7 -7.8 -16.7 18 159 A H H <5S+ 0 0 14 -4,-3.0 -2,-0.2 -5,-0.2 -1,-0.2 0.873 107.4 54.6 -69.1 -38.9 30.1 -10.9 -14.5 19 160 A K H <5S+ 0 0 122 -4,-2.7 -1,-0.2 -5,-0.2 -2,-0.2 0.855 119.1 34.2 -63.2 -35.9 31.9 -12.9 -17.2 20 161 A R H <5S+ 0 0 193 -4,-1.5 -2,-0.2 -5,-0.2 -1,-0.2 0.911 136.4 19.9 -84.8 -49.7 34.5 -10.1 -17.6 21 162 A L T <5S- 0 0 48 -4,-3.1 2,-0.4 1,-0.2 -3,-0.2 0.949 92.5-147.2 -86.7 -60.6 34.8 -8.9 -14.0 22 163 A G < - 0 0 17 -5,-0.6 -1,-0.2 2,-0.1 2,-0.2 -0.973 65.0 -9.2 126.9-141.0 33.4 -11.8 -11.8 23 164 A N S S+ 0 0 84 -2,-0.4 2,-1.7 1,-0.1 3,-0.3 -0.040 89.7 130.6 -83.2 33.4 31.6 -11.5 -8.5 24 165 A R >> + 0 0 141 1,-0.2 3,-2.1 -2,-0.2 4,-1.8 -0.465 15.9 154.5 -87.1 65.1 32.4 -7.8 -8.5 25 166 A W H 3> + 0 0 13 -2,-1.7 4,-3.0 1,-0.3 5,-0.2 0.751 64.5 75.6 -63.7 -22.3 28.9 -6.6 -7.8 26 167 A A H 34 S+ 0 0 61 -3,-0.3 -1,-0.3 1,-0.2 -2,-0.1 0.743 107.4 32.9 -59.8 -22.0 30.5 -3.5 -6.3 27 168 A E H X> S+ 0 0 70 -3,-2.1 3,-1.2 2,-0.1 4,-1.1 0.840 118.7 49.2 -98.5 -50.6 31.0 -2.5 -10.0 28 169 A I H >X S+ 0 0 0 -4,-1.8 4,-1.8 1,-0.3 3,-0.6 0.897 105.7 60.2 -56.4 -42.5 27.9 -4.1 -11.6 29 170 A A H 3< S+ 0 0 14 -4,-3.0 -1,-0.3 1,-0.3 6,-0.2 0.763 99.8 57.1 -58.3 -26.6 25.8 -2.4 -8.9 30 171 A K H <4 S+ 0 0 148 -3,-1.2 -1,-0.3 -5,-0.2 -2,-0.2 0.875 105.3 49.5 -72.5 -37.2 27.1 1.0 -10.1 31 172 A L H << S+ 0 0 114 -4,-1.1 -2,-0.2 -3,-0.6 -1,-0.2 0.844 122.6 35.0 -68.1 -34.0 25.8 0.3 -13.7 32 173 A L >< + 0 0 36 -4,-1.8 3,-1.7 3,-0.2 -1,-0.3 -0.755 69.7 174.8-121.8 81.0 22.4 -0.7 -12.2 33 174 A P T 3 S+ 0 0 110 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.855 81.0 59.6 -54.9 -39.2 21.9 1.6 -9.1 34 175 A G T 3 S+ 0 0 78 1,-0.1 2,-0.7 -3,-0.1 -4,-0.1 0.741 98.6 68.1 -61.8 -23.3 18.4 0.2 -8.6 35 176 A R S < S- 0 0 66 -3,-1.7 -3,-0.2 -6,-0.2 -1,-0.1 -0.875 81.7-150.7-103.6 106.1 20.1 -3.2 -8.2 36 177 A T > - 0 0 81 -2,-0.7 4,-2.6 1,-0.1 5,-0.3 -0.260 27.9-108.0 -71.5 161.6 22.1 -3.3 -4.9 37 178 A D H > S+ 0 0 58 1,-0.2 4,-2.7 2,-0.2 5,-0.2 0.896 123.3 48.7 -54.5 -43.4 25.2 -5.5 -4.5 38 179 A N H > S+ 0 0 112 2,-0.2 4,-2.8 1,-0.2 5,-0.3 0.913 110.3 50.8 -64.5 -44.7 23.1 -7.7 -2.2 39 180 A A H > S+ 0 0 36 2,-0.2 4,-2.6 1,-0.2 -2,-0.2 0.945 116.6 38.9 -59.4 -52.2 20.2 -7.9 -4.6 40 181 A I H X S+ 0 0 0 -4,-2.6 4,-3.0 2,-0.2 5,-0.3 0.948 116.9 50.4 -64.5 -50.5 22.4 -8.9 -7.6 41 182 A K H X S+ 0 0 64 -4,-2.7 4,-2.5 -5,-0.3 -2,-0.2 0.931 115.8 42.0 -53.0 -52.5 24.7 -11.2 -5.6 42 183 A N H < S+ 0 0 112 -4,-2.8 5,-0.3 -5,-0.2 -1,-0.2 0.955 115.0 50.0 -60.7 -53.8 21.7 -13.0 -4.0 43 184 A H H >X>S+ 0 0 17 -4,-2.6 4,-3.0 -5,-0.3 5,-0.9 0.911 114.8 44.1 -51.9 -50.7 19.7 -13.2 -7.3 44 185 A W H 3<5S+ 0 0 2 -4,-3.0 2,-1.9 1,-0.3 -1,-0.2 0.962 110.8 52.6 -61.6 -55.4 22.7 -14.6 -9.2 45 186 A N T 3<5S+ 0 0 61 -4,-2.5 -1,-0.3 -5,-0.3 -2,-0.1 -0.236 123.6 29.1 -80.3 50.8 23.8 -17.2 -6.6 46 187 A S T <45S+ 0 0 52 -2,-1.9 3,-0.2 -3,-0.7 -2,-0.2 0.126 133.1 22.9-165.6 -52.8 20.2 -18.6 -6.4 47 188 A T T <5S+ 0 0 101 -4,-3.0 2,-0.7 -5,-0.3 -3,-0.2 0.893 130.5 33.2 -94.3 -55.8 18.5 -18.2 -9.8 48 189 A M < + 0 0 36 -5,-0.9 2,-2.2 -4,-0.2 -1,-0.2 -0.557 64.7 163.9-106.2 66.5 21.4 -17.8 -12.3 49 190 A R + 0 0 162 -2,-0.7 2,-0.3 -3,-0.2 -4,-0.1 -0.381 32.0 125.9 -80.2 60.8 24.1 -20.1 -10.7 50 191 A R + 0 0 176 -2,-2.2 2,-2.6 -6,-0.1 -1,-0.1 -0.615 33.8 178.0-119.0 67.2 26.0 -20.1 -14.1 51 192 A K 0 0 104 -2,-0.3 -2,-0.1 1,-0.2 -28,-0.0 -0.428 360.0 360.0 -73.3 71.7 29.4 -19.0 -12.9 52 193 A V 0 0 115 -2,-2.6 -1,-0.2 -37,-0.0 -3,-0.0 0.231 360.0 360.0-165.4 360.0 31.0 -19.3 -16.4