==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-SEP-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 29-AUG-13 2MD2 . COMPND 2 MOLECULE: LACTOTRANSFERRIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.BHUNIA,S.CHATTERJEE,A.GHOSH,J.JANA . 10 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1309.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 5 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 30.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A W >> 0 0 207 0, 0.0 4,-2.9 0, 0.0 3,-1.4 0.000 360.0 360.0 360.0 136.9 2.1 0.0 -1.2 2 2 A K H 3> + 0 0 150 1,-0.3 4,-2.6 2,-0.2 7,-0.2 0.900 360.0 49.3 -51.2 -45.5 5.3 1.9 -1.8 3 3 A L H 34 S+ 0 0 116 1,-0.2 -1,-0.3 2,-0.2 4,-0.1 0.683 117.8 42.1 -69.0 -17.3 3.6 4.0 -4.5 4 4 A L H <4 S+ 0 0 119 -3,-1.4 -2,-0.2 2,-0.1 -1,-0.2 0.664 119.8 41.4-100.4 -22.9 0.7 4.5 -2.0 5 5 A S H >X S+ 0 0 44 -4,-2.9 3,-3.0 1,-0.2 4,-0.9 0.648 90.4 86.0 -96.8 -20.2 3.0 5.2 1.0 6 6 A K T 3< S+ 0 0 101 -4,-2.6 3,-0.2 -5,-0.4 -1,-0.2 0.759 76.8 72.8 -51.6 -24.9 5.5 7.3 -0.9 7 7 A A T 34 S+ 0 0 78 1,-0.2 -1,-0.3 2,-0.2 3,-0.2 0.778 110.5 28.2 -61.9 -26.6 3.1 10.2 -0.1 8 8 A Q T <4 S+ 0 0 155 -3,-3.0 -1,-0.2 1,-0.1 -2,-0.2 0.369 117.4 61.1-113.5 -0.8 4.3 10.0 3.5 9 9 A E < 0 0 129 -4,-0.9 -2,-0.2 -3,-0.2 -3,-0.1 -0.070 360.0 360.0-116.0 30.8 7.8 8.6 2.8 10 10 A K 0 0 210 -3,-0.2 -1,-0.1 -5,-0.1 -3,-0.1 0.094 360.0 360.0 -64.3 360.0 9.0 11.6 0.7