==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-SEP-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 29-AUG-13 2MD3 . COMPND 2 MOLECULE: LACTOTRANSFERRIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR A.BHUNIA,S.CHATTERJEE,A.GHOSH,J.JANA . 8 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1345.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 1 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A K 0 0 243 0, 0.0 4,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 27.7 2.1 -0.0 -1.2 2 2 A F + 0 0 204 2,-0.1 3,-0.4 4,-0.0 0, 0.0 0.644 360.0 44.9-116.5 -31.2 2.3 -3.8 -1.3 3 3 A G S > S+ 0 0 54 1,-0.2 3,-0.9 2,-0.1 -1,-0.0 0.112 82.9 99.0-102.1 21.0 -1.1 -4.8 -2.7 4 4 A K T 3 S+ 0 0 149 1,-0.2 3,-0.4 2,-0.1 -1,-0.2 0.767 82.0 51.9 -76.3 -26.5 -1.0 -2.2 -5.5 5 5 A N T 3 S+ 0 0 129 -3,-0.4 -1,-0.2 1,-0.2 -2,-0.1 0.015 88.2 86.3 -97.9 26.7 0.1 -4.8 -8.0 6 6 A K < + 0 0 170 -3,-0.9 -1,-0.2 1,-0.1 -2,-0.1 -0.042 68.1 81.9-114.3 29.1 -2.7 -7.1 -7.1 7 7 A S 0 0 111 -3,-0.4 -2,-0.1 1,-0.1 -1,-0.1 0.896 360.0 360.0 -95.0 -67.1 -5.3 -5.6 -9.4 8 8 A R 0 0 285 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 -0.377 360.0 360.0 -57.8 360.0 -4.7 -7.1 -12.9