==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=27-SEP-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 20-SEP-13 2ME0 . COMPND 2 MOLECULE: HOMEOBOX PROTEIN GBX-1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.PROUDFOOT,P.SERRANO,M.GERALT,K.WUTHRICH,JOINT CENTER FOR S . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7038.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 63.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 15 21.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 23 32.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 1 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 175 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 132.6 2.4 16.7 13.5 2 2 A A - 0 0 92 1,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.375 360.0-128.9 -68.3 153.1 1.8 15.2 10.0 3 3 A P - 0 0 122 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.484 37.3-166.9 -81.0 -3.7 4.7 15.3 7.4 4 4 A G - 0 0 62 1,-0.1 3,-0.2 2,-0.0 0, 0.0 -0.342 11.6-176.5 60.9-116.0 2.3 16.9 4.8 5 5 A G - 0 0 42 -2,-0.2 2,-1.8 1,-0.1 -1,-0.1 0.885 26.4-132.2 81.0 89.8 3.9 16.7 1.3 6 6 A K S S+ 0 0 221 2,-0.0 2,-0.2 1,-0.0 -1,-0.1 -0.524 72.7 98.6 -80.7 74.5 1.5 18.4 -1.2 7 7 A S + 0 0 98 -2,-1.8 2,-0.2 -3,-0.2 -1,-0.0 -0.816 39.5 132.3-144.8 112.4 1.3 15.9 -4.1 8 8 A R - 0 0 212 -2,-0.2 2,-0.6 2,-0.0 -3,-0.0 -0.654 37.9-156.5-159.5 104.7 -1.8 13.7 -4.1 9 9 A R - 0 0 228 -2,-0.2 2,-1.1 1,-0.0 3,-0.0 -0.751 27.3-131.7 -73.6 119.5 -4.1 12.9 -7.0 10 10 A R + 0 0 196 -2,-0.6 -1,-0.0 1,-0.2 3,-0.0 -0.690 48.2 150.6 -76.4 101.8 -7.4 11.8 -5.4 11 11 A R + 0 0 181 -2,-1.1 2,-0.3 42,-0.0 -1,-0.2 0.146 53.7 47.8-118.5 11.8 -8.1 8.6 -7.3 12 12 A T - 0 0 45 2,-0.1 -1,-0.0 41,-0.0 0, 0.0 -0.989 62.4-137.2-150.1 167.3 -10.1 6.7 -4.7 13 13 A A + 0 0 83 -2,-0.3 2,-0.2 2,-0.0 -3,-0.0 -0.224 65.5 117.4-114.9 30.8 -13.0 6.8 -2.1 14 14 A F - 0 0 32 3,-0.0 2,-0.2 4,-0.0 -2,-0.1 -0.655 51.5-143.8 -93.0 167.5 -11.2 4.9 0.7 15 15 A T > - 0 0 64 -2,-0.2 4,-1.8 1,-0.0 3,-0.2 -0.753 29.9-104.5-124.1 162.5 -10.4 6.5 4.1 16 16 A S T 4 S+ 0 0 94 -2,-0.2 4,-0.5 1,-0.2 -2,-0.0 0.758 121.1 59.7 -57.2 -25.5 -7.4 6.1 6.5 17 17 A E T 4 S+ 0 0 153 1,-0.2 3,-0.5 2,-0.2 4,-0.4 0.910 110.8 35.9 -79.4 -42.7 -9.8 4.0 8.6 18 18 A Q T > S+ 0 0 32 1,-0.2 4,-0.6 -3,-0.2 -1,-0.2 0.692 114.8 60.5 -77.0 -26.3 -10.4 1.3 5.9 19 19 A L H X S+ 0 0 43 -4,-1.8 4,-1.3 1,-0.2 5,-0.3 0.595 82.9 82.6 -73.8 -15.9 -6.7 1.8 4.8 20 20 A L H >> S+ 0 0 106 -3,-0.5 4,-2.5 -4,-0.5 3,-1.0 0.963 97.4 38.0 -60.7 -52.5 -5.4 0.7 8.2 21 21 A E H 3> S+ 0 0 65 -4,-0.4 4,-1.7 1,-0.3 -1,-0.2 0.794 111.1 61.7 -62.2 -37.7 -5.7 -3.1 7.4 22 22 A L H 3< S+ 0 0 1 -4,-0.6 -1,-0.3 1,-0.2 -2,-0.2 0.701 115.4 32.7 -66.8 -26.4 -4.6 -2.4 3.8 23 23 A E H X< S+ 0 0 107 -4,-1.3 3,-1.9 -3,-1.0 4,-0.4 0.730 108.0 69.7 -96.4 -34.8 -1.2 -1.1 5.1 24 24 A K H >X S+ 0 0 121 -4,-2.5 3,-2.0 1,-0.3 4,-0.6 0.836 88.0 66.4 -55.8 -35.6 -1.2 -3.5 8.1 25 25 A E H >X S+ 0 0 42 -4,-1.7 4,-2.6 1,-0.3 3,-0.9 0.809 87.7 67.4 -59.9 -27.0 -0.6 -6.4 5.7 26 26 A F H <4 S+ 0 0 96 -3,-1.9 -1,-0.3 1,-0.3 -2,-0.2 0.740 97.6 54.3 -63.6 -20.7 2.8 -4.9 4.9 27 27 A H H <4 S+ 0 0 179 -3,-2.0 -1,-0.3 -4,-0.4 -2,-0.2 0.685 112.1 43.4 -84.9 -19.3 3.8 -5.8 8.5 28 28 A C H << S- 0 0 98 -3,-0.9 2,-0.3 -4,-0.6 -2,-0.2 0.888 132.6 -13.3 -81.7 -48.6 2.7 -9.5 7.9 29 29 A K < - 0 0 43 -4,-2.6 -1,-0.3 1,-0.0 3,-0.0 -0.958 55.0-122.5-153.6 158.6 4.3 -9.9 4.4 30 30 A K S S+ 0 0 128 -2,-0.3 2,-0.3 -3,-0.1 -4,-0.1 0.386 94.1 46.4 -89.6 4.5 5.9 -7.8 1.6 31 31 A Y - 0 0 153 -6,-0.2 2,-0.5 2,-0.0 -1,-0.0 -0.993 63.3-149.7-153.4 147.6 3.5 -9.1 -1.1 32 32 A L - 0 0 30 -2,-0.3 -6,-0.0 4,-0.0 -7,-0.0 -0.927 17.7-157.7-130.1 98.1 -0.3 -9.7 -1.5 33 33 A S > - 0 0 57 -2,-0.5 4,-3.2 1,-0.1 3,-0.3 -0.138 39.5 -92.5 -61.9 171.7 -1.3 -12.6 -3.8 34 34 A L H > S+ 0 0 143 1,-0.2 4,-1.5 2,-0.2 5,-0.1 0.907 128.6 46.0 -60.3 -46.1 -4.8 -12.6 -5.4 35 35 A T H 4 S+ 0 0 109 2,-0.2 -1,-0.2 1,-0.2 4,-0.2 0.784 116.4 46.9 -61.4 -34.1 -6.4 -14.7 -2.5 36 36 A E H >> S+ 0 0 49 -3,-0.3 3,-1.6 2,-0.2 4,-0.8 0.905 108.7 52.8 -79.5 -44.0 -4.7 -12.4 0.0 37 37 A R H 3X S+ 0 0 11 -4,-3.2 4,-1.5 1,-0.3 -2,-0.2 0.825 104.4 58.0 -60.2 -35.3 -5.7 -9.2 -1.7 38 38 A S H 3X S+ 0 0 36 -4,-1.5 4,-1.3 -5,-0.2 -1,-0.3 0.609 94.6 68.8 -74.6 -10.5 -9.3 -10.4 -1.6 39 39 A Q H X> S+ 0 0 113 -3,-1.6 4,-0.8 -4,-0.2 3,-0.8 0.998 107.8 31.9 -67.8 -70.2 -9.2 -10.7 2.2 40 40 A I H >X S+ 0 0 12 -4,-0.8 4,-1.1 1,-0.2 3,-0.9 0.868 116.3 59.3 -54.2 -42.4 -9.0 -7.0 3.1 41 41 A A H 3<>S+ 0 0 6 -4,-1.5 5,-0.8 1,-0.3 -1,-0.2 0.893 117.3 32.5 -56.1 -36.3 -11.1 -6.1 0.0 42 42 A H H <<5S+ 0 0 175 -4,-1.3 -1,-0.3 -3,-0.8 -2,-0.2 0.410 106.7 75.9 -94.9 -3.5 -13.9 -8.3 1.5 43 43 A A H <<5S+ 0 0 70 -3,-0.9 -2,-0.2 -4,-0.8 -1,-0.2 0.767 115.5 2.0 -84.4 -27.8 -12.9 -7.5 5.2 44 44 A L T <5S- 0 0 51 -4,-1.1 -3,-0.1 -3,-0.2 -2,-0.1 0.512 112.1 -66.8-121.4 -88.5 -14.5 -4.0 5.2 45 45 A K T 5S+ 0 0 168 -5,-0.2 -3,-0.1 -27,-0.1 -4,-0.1 0.073 79.4 135.8-159.0 10.9 -16.3 -2.5 2.1 46 46 A L < - 0 0 20 -5,-0.8 2,-0.5 -6,-0.4 3,-0.0 -0.184 50.8-120.3 -85.8 175.0 -13.7 -2.1 -0.6 47 47 A S >> - 0 0 62 1,-0.1 4,-1.5 -5,-0.0 3,-0.6 -0.956 5.0-148.6-118.6 116.4 -13.6 -2.8 -4.3 48 48 A E H 3> S+ 0 0 111 -2,-0.5 4,-1.2 1,-0.2 -1,-0.1 0.747 100.8 64.8 -56.6 -24.2 -11.0 -5.3 -5.8 49 49 A V H >> S+ 0 0 111 1,-0.2 4,-0.7 2,-0.2 3,-0.7 0.971 103.5 44.6 -57.7 -53.8 -11.1 -3.1 -8.9 50 50 A Q H X> S+ 0 0 26 -3,-0.6 4,-2.1 1,-0.2 3,-0.6 0.834 101.8 67.0 -62.0 -35.4 -9.7 -0.2 -7.0 51 51 A V H 3X S+ 0 0 5 -4,-1.5 4,-1.6 1,-0.2 -1,-0.2 0.899 93.3 62.0 -54.2 -38.7 -7.1 -2.5 -5.4 52 52 A K H << S+ 0 0 154 -4,-1.2 -1,-0.2 -3,-0.7 4,-0.2 0.891 113.2 33.7 -49.9 -49.9 -5.5 -2.8 -8.9 53 53 A I H X< S+ 0 0 35 -4,-0.7 3,-1.3 -3,-0.6 4,-0.4 0.698 102.8 75.1 -84.3 -21.8 -4.8 0.9 -9.0 54 54 A W H >< S+ 0 0 39 -4,-2.1 3,-1.7 1,-0.3 4,-0.3 0.944 94.3 54.8 -58.4 -38.9 -4.1 1.2 -5.2 55 55 A F G >< S+ 0 0 78 -4,-1.6 3,-1.2 1,-0.3 -1,-0.3 0.699 88.5 76.5 -64.4 -21.3 -0.7 -0.5 -6.1 56 56 A Q G < S+ 0 0 134 -3,-1.3 -1,-0.3 1,-0.2 3,-0.3 0.658 95.0 52.6 -64.6 -12.1 -0.0 2.3 -8.7 57 57 A N G X S+ 0 0 97 -3,-1.7 3,-1.7 -4,-0.4 4,-0.5 0.653 81.7 91.6 -91.9 -17.9 0.8 4.4 -5.6 58 58 A R T < S+ 0 0 121 -3,-1.2 -1,-0.2 -4,-0.3 -2,-0.1 0.243 85.0 50.9 -73.7 13.8 3.4 2.0 -4.0 59 59 A R T 3> S+ 0 0 179 -3,-0.3 4,-1.0 -2,-0.2 -1,-0.3 0.528 88.0 79.5-116.7 -15.0 6.4 3.6 -5.7 60 60 A A H <> S+ 0 0 65 -3,-1.7 4,-1.9 1,-0.2 3,-0.3 0.897 77.6 72.8 -65.2 -43.1 5.9 7.3 -4.8 61 61 A K H >> S+ 0 0 142 -4,-0.5 4,-0.7 1,-0.3 3,-0.5 0.829 106.2 30.4 -44.7 -63.7 7.3 7.1 -1.3 62 62 A W H 3> S+ 0 0 132 1,-0.2 4,-3.3 -3,-0.2 3,-0.4 0.795 114.8 62.3 -72.0 -27.0 11.0 6.7 -2.0 63 63 A K H 3< S+ 0 0 125 -4,-1.0 -2,-0.2 -3,-0.3 -1,-0.2 0.745 93.4 64.6 -72.3 -21.7 10.8 8.7 -5.2 64 64 A R H << S+ 0 0 144 -4,-1.9 3,-0.4 -3,-0.5 -1,-0.2 0.917 118.1 25.9 -54.6 -48.0 9.7 11.8 -3.2 65 65 A I H < S+ 0 0 147 -4,-0.7 2,-2.0 -3,-0.4 -2,-0.2 0.946 122.0 54.0 -82.5 -57.7 13.1 11.7 -1.6 66 66 A K S < S+ 0 0 146 -4,-3.3 2,-0.9 -5,-0.1 -1,-0.2 -0.319 70.5 155.5 -75.7 48.5 15.0 10.0 -4.4 67 67 A A + 0 0 82 -2,-2.0 2,-0.3 -3,-0.4 -3,-0.1 -0.808 32.9 119.8 -74.4 102.8 13.8 12.7 -6.8 68 68 A G - 0 0 57 -2,-0.9 2,-0.2 -5,-0.1 -2,-0.0 -0.939 49.6-130.0-165.9 175.9 16.7 12.2 -9.3 69 69 A N - 0 0 167 -2,-0.3 2,-0.3 0, 0.0 0, 0.0 -0.540 15.4-114.2-133.3-174.9 17.6 11.3 -12.9 70 70 A V 0 0 144 1,-0.2 -2,-0.0 -2,-0.2 0, 0.0 -0.943 360.0 360.0-125.9 149.4 19.9 9.2 -15.1 71 71 A S 0 0 171 -2,-0.3 -1,-0.2 0, 0.0 0, 0.0 0.928 360.0 360.0 -76.2 360.0 22.8 10.0 -17.5