==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-OCT-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 20-SEP-13 2ME3 . COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN GP160; . SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; . AUTHOR Z.J.SUN,G.WAGNER,E.L.REINHERZ,M.KIM,L.SONG,J.CHOI,Y.CHENG, . 27 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3343.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 74.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 7.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 25.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 11 40.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 657 A E 0 0 236 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 48.2 14.4 -4.7 4.5 2 658 A K + 0 0 136 6,-0.0 4,-0.1 7,-0.0 0, 0.0 -0.124 360.0 165.5-161.3 52.4 17.2 -4.5 1.9 3 659 A D > - 0 0 119 1,-0.1 3,-0.8 2,-0.1 6,-0.1 0.092 54.4 -96.5 -61.0-174.9 16.5 -1.8 -0.7 4 660 A L T 3 S+ 0 0 130 1,-0.2 -1,-0.1 5,-0.0 5,-0.0 0.868 125.2 51.2 -75.9 -35.2 19.2 -0.6 -3.0 5 661 A L T 3 S+ 0 0 121 4,-0.0 2,-0.8 5,-0.0 -1,-0.2 0.142 74.7 148.1 -88.0 23.1 20.2 2.4 -0.8 6 662 A A X> - 0 0 18 -3,-0.8 4,-2.4 1,-0.2 3,-2.0 -0.407 39.3-156.1 -61.2 103.0 20.4 0.1 2.2 7 663 A L H 3> S+ 0 0 124 -2,-0.8 4,-1.9 1,-0.3 -1,-0.2 0.800 93.7 62.9 -54.2 -24.0 23.2 1.9 4.2 8 664 A D H 34 S+ 0 0 136 1,-0.2 -1,-0.3 2,-0.2 4,-0.2 0.839 111.2 36.2 -71.0 -29.1 23.9 -1.5 5.8 9 665 A S H X> S+ 0 0 58 -3,-2.0 3,-0.6 2,-0.1 4,-0.5 0.738 114.9 55.9 -93.4 -25.2 24.8 -2.8 2.3 10 666 A W H >X S+ 0 0 78 -4,-2.4 4,-2.4 1,-0.2 3,-1.1 0.838 86.4 78.3 -75.3 -32.8 26.5 0.4 1.1 11 667 A K H 3X S+ 0 0 141 -4,-1.9 4,-1.6 -5,-0.3 -1,-0.2 0.837 90.4 58.6 -47.1 -29.8 28.9 0.5 4.1 12 668 A N H <> S+ 0 0 110 -3,-0.6 4,-1.3 -4,-0.2 -1,-0.3 0.931 107.4 44.1 -68.2 -42.2 30.8 -2.1 2.2 13 669 A L H > + 0 0 74 -2,-1.2 3,-2.1 1,-0.2 4,-1.4 -0.262 20.1 146.1 -99.4 48.5 40.8 3.0 1.1 19 675 A I H 3> + 0 0 74 -2,-0.4 4,-4.0 1,-0.3 5,-0.3 0.898 68.0 63.4 -52.7 -40.3 42.5 6.1 -0.3 20 676 A T H 3> S+ 0 0 110 -3,-0.3 4,-0.6 1,-0.2 -1,-0.3 0.830 103.0 53.2 -56.0 -24.9 43.7 7.0 3.2 21 677 A N H <4 S+ 0 0 109 -3,-2.1 3,-0.3 2,-0.2 -2,-0.2 0.955 120.1 28.1 -76.0 -50.6 45.7 3.7 3.0 22 678 A W H >< S+ 0 0 132 -4,-1.4 3,-1.1 1,-0.2 -2,-0.2 0.728 113.0 67.5 -84.6 -17.1 47.4 4.4 -0.3 23 679 A L H >X S+ 0 0 55 -4,-4.0 3,-2.5 -5,-0.3 4,-0.8 0.750 74.7 88.1 -71.5 -21.5 47.4 8.2 0.3 24 680 A W T 3< S+ 0 0 208 -4,-0.6 -1,-0.2 -3,-0.3 -2,-0.1 0.754 91.9 46.5 -49.6 -22.2 49.8 7.8 3.2 25 681 A Y T <4 S+ 0 0 160 -3,-1.1 -1,-0.3 1,-0.1 -2,-0.2 0.491 92.8 76.4-100.5 -4.6 52.6 8.1 0.6 26 682 A I T <4 0 0 95 -3,-2.5 -2,-0.2 -4,-0.1 -1,-0.1 0.799 360.0 360.0 -77.7 -25.3 51.3 11.2 -1.3 27 683 A K < 0 0 245 -4,-0.8 0, 0.0 -3,-0.1 0, 0.0 -0.473 360.0 360.0 -69.0 360.0 52.5 13.6 1.4