==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 20-AUG-02 1MHN . COMPND 2 MOLECULE: SURVIVAL MOTOR NEURON PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR R.SPRANGERS,M.R.GROVES,I.SINNING,M.SATTLER . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4094.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 66.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 23 39.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 5.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 89 A L 0 0 134 0, 0.0 2,-0.3 0, 0.0 50,-0.1 0.000 360.0 360.0 360.0 144.9 -7.9 -18.9 5.9 2 90 A Q - 0 0 126 48,-0.3 2,-0.6 51,-0.0 51,-0.1 -0.728 360.0 -92.2-104.9 168.0 -10.1 -16.7 3.8 3 91 A Q + 0 0 195 -2,-0.3 2,-0.4 2,-0.0 0, 0.0 -0.675 53.6 173.1 -82.7 121.1 -10.5 -17.1 0.1 4 92 A W - 0 0 33 -2,-0.6 2,-0.3 4,-0.0 6,-0.0 -0.937 13.4-166.3-125.8 156.2 -8.0 -15.0 -1.7 5 93 A K > - 0 0 134 -2,-0.4 3,-2.3 22,-0.0 20,-0.3 -0.952 38.0 -84.2-138.8 157.6 -7.1 -14.6 -5.4 6 94 A V T 3 S+ 0 0 90 -2,-0.3 20,-0.2 1,-0.3 3,-0.1 -0.338 117.6 25.5 -58.0 137.4 -4.2 -13.1 -7.3 7 95 A G T 3 S+ 0 0 47 18,-3.3 -1,-0.3 1,-0.3 19,-0.1 0.278 88.8 140.9 91.7 -12.8 -4.8 -9.4 -7.7 8 96 A D < - 0 0 36 -3,-2.3 17,-2.1 16,-0.1 2,-0.4 -0.317 53.8-122.2 -62.3 144.4 -7.1 -9.1 -4.7 9 97 A K E +A 24 0A 163 15,-0.2 2,-0.3 -3,-0.1 15,-0.2 -0.753 48.7 146.2 -82.2 139.4 -6.8 -6.0 -2.5 10 98 A C E -A 23 0A 2 13,-2.9 13,-3.0 -2,-0.4 2,-0.3 -0.837 40.5-120.8-150.3-175.2 -5.9 -6.8 1.1 11 99 A S E +AB 22 54A 0 43,-2.3 43,-2.8 11,-0.3 2,-0.3 -0.942 29.2 179.4-130.6 157.1 -4.0 -5.3 4.0 12 100 A A E -A 21 0A 0 9,-2.2 9,-2.5 -2,-0.3 2,-0.6 -0.994 34.8-101.5-152.5 158.5 -1.1 -6.9 5.8 13 101 A I E -A 20 0A 87 39,-0.4 2,-0.3 -2,-0.3 7,-0.2 -0.741 37.6-135.3 -81.0 120.8 1.4 -6.3 8.6 14 102 A W >> - 0 0 18 5,-2.7 4,-2.5 -2,-0.6 3,-0.9 -0.583 5.4-142.9 -77.8 132.3 4.8 -5.4 7.1 15 103 A S T 34 S+ 0 0 96 -2,-0.3 -1,-0.1 1,-0.3 -2,-0.0 0.680 93.5 67.8 -72.9 -14.8 7.5 -7.3 8.8 16 104 A E T 34 S+ 0 0 115 1,-0.1 -1,-0.3 3,-0.1 -2,-0.0 0.820 124.4 3.0 -73.5 -32.9 9.9 -4.3 8.7 17 105 A D T <4 S- 0 0 69 -3,-0.9 -2,-0.2 2,-0.2 -1,-0.1 0.490 91.0-117.7-135.7 -2.2 7.9 -2.1 11.1 18 106 A G S < S+ 0 0 55 -4,-2.5 2,-0.3 1,-0.3 -3,-0.1 0.701 71.6 128.2 69.4 22.1 5.0 -4.1 12.4 19 107 A C - 0 0 59 -5,-0.5 -5,-2.7 -7,-0.0 2,-0.3 -0.775 63.2-108.3-108.9 159.2 2.4 -1.7 10.9 20 108 A I E +A 13 0A 64 -2,-0.3 -7,-0.2 -7,-0.2 -9,-0.0 -0.652 38.9 178.8 -86.3 137.7 -0.6 -2.5 8.6 21 109 A Y E -A 12 0A 38 -9,-2.5 -9,-2.2 -2,-0.3 2,-0.1 -0.977 33.6-105.4-135.5 149.5 -0.3 -1.4 5.0 22 110 A P E +A 11 0A 24 0, 0.0 18,-1.5 0, 0.0 2,-0.3 -0.476 49.5 173.9 -66.8 147.1 -2.6 -1.7 2.0 23 111 A A E -AC 10 39A 2 -13,-3.0 -13,-2.9 16,-0.3 2,-0.4 -0.931 30.9-137.0-150.4 163.3 -1.5 -4.4 -0.4 24 112 A T E -AC 9 38A 53 14,-1.7 14,-2.5 -2,-0.3 2,-0.5 -0.973 32.9-115.2-119.2 139.3 -2.3 -6.4 -3.6 25 113 A I E + C 0 37A 1 -17,-2.1 -18,-3.3 -2,-0.4 12,-0.2 -0.690 31.8 178.6 -77.9 122.4 -1.7 -10.2 -3.9 26 114 A A E - 0 0 49 10,-2.9 2,-0.3 -2,-0.5 11,-0.2 0.700 65.3 -7.5 -94.2 -31.5 0.9 -10.8 -6.6 27 115 A S E - C 0 36A 51 9,-1.2 9,-2.1 -22,-0.1 2,-0.4 -0.965 58.1-147.7-163.2 150.4 1.1 -14.6 -6.3 28 116 A I E - C 0 35A 30 -2,-0.3 2,-0.7 7,-0.2 7,-0.3 -0.996 2.6-159.5-127.7 139.0 -0.2 -17.4 -4.1 29 117 A D E >> - C 0 34A 68 5,-3.4 5,-2.1 -2,-0.4 4,-1.2 -0.887 12.3-176.5-113.1 96.8 1.5 -20.7 -3.3 30 118 A F T 45S+ 0 0 129 -2,-0.7 3,-0.3 1,-0.2 -1,-0.2 0.877 77.1 58.0 -67.8 -35.9 -1.4 -22.9 -2.2 31 119 A K T 45S+ 0 0 208 1,-0.2 -1,-0.2 -3,-0.1 -2,-0.0 0.875 118.1 32.4 -64.0 -36.0 0.7 -25.9 -1.3 32 120 A R T 45S- 0 0 193 -3,-0.3 -1,-0.2 2,-0.1 -2,-0.2 0.535 106.7-127.4 -94.9 -5.7 2.7 -23.8 1.3 33 121 A E T <5 + 0 0 82 -4,-1.2 17,-2.5 1,-0.3 18,-0.4 0.843 69.0 119.7 60.0 38.7 -0.3 -21.6 2.1 34 122 A T E < -CD 29 49A 14 -5,-2.1 -5,-3.4 15,-0.3 2,-0.3 -0.795 40.7-171.4-121.8 168.8 1.7 -18.5 1.5 35 123 A C E -CD 28 48A 2 13,-2.9 13,-2.7 -2,-0.3 2,-0.5 -0.933 23.9-120.8-145.8 169.8 1.5 -15.6 -0.9 36 124 A V E -CD 27 47A 26 -9,-2.1 -10,-2.9 -2,-0.3 -9,-1.2 -0.986 30.0-167.1-110.4 129.6 3.5 -12.6 -2.0 37 125 A V E -CD 25 46A 0 9,-2.7 9,-2.2 -2,-0.5 2,-0.5 -0.850 13.6-144.0-110.7 152.8 1.9 -9.2 -1.5 38 126 A V E -CD 24 45A 51 -14,-2.5 -14,-1.7 -2,-0.3 2,-0.6 -0.974 22.9-126.3-114.7 122.9 3.0 -5.8 -2.9 39 127 A Y E >>> -CD 23 44A 0 5,-2.6 3,-2.3 -2,-0.5 5,-0.6 -0.598 34.8-115.0 -76.2 116.6 2.5 -2.9 -0.6 40 128 A T T 345S- 0 0 67 -18,-1.5 -1,-0.1 -2,-0.6 -17,-0.0 -0.328 91.5 -5.6 -61.8 110.6 0.5 -0.4 -2.6 41 129 A G T 345S+ 0 0 84 -2,-0.3 -1,-0.3 3,-0.0 -2,-0.1 0.520 115.9 90.1 83.2 6.3 2.4 2.7 -3.3 42 130 A Y T <45S- 0 0 111 -3,-2.3 -2,-0.2 2,-0.2 -3,-0.1 0.355 85.0-135.9-114.6 -2.1 5.2 1.6 -1.1 43 131 A G T <5 + 0 0 75 -4,-0.6 2,-0.3 1,-0.1 -3,-0.1 0.591 65.9 103.7 67.0 17.5 7.2 -0.2 -3.9 44 132 A N E < -D 39 0A 87 -5,-0.6 -5,-2.6 2,-0.0 2,-0.3 -0.901 50.5-156.2-135.1 156.6 8.1 -3.3 -1.8 45 133 A R E -D 38 0A 178 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.896 8.9-178.5-133.9 164.0 6.9 -6.9 -1.6 46 134 A E E -D 37 0A 29 -9,-2.2 -9,-2.7 -2,-0.3 2,-0.3 -0.987 30.9-110.0-160.6 143.8 6.9 -9.6 1.0 47 135 A E E -D 36 0A 129 -2,-0.3 2,-0.3 -11,-0.2 -11,-0.3 -0.649 40.2-178.4 -73.2 138.6 5.8 -13.2 1.6 48 136 A Q E -D 35 0A 17 -13,-2.7 -13,-2.9 -2,-0.3 2,-0.3 -0.974 32.8-111.9-133.5 145.2 2.9 -13.6 3.9 49 137 A N E > -D 34 0A 80 -2,-0.3 3,-1.6 -15,-0.2 4,-0.3 -0.630 29.7-128.0 -66.5 136.3 1.0 -16.6 5.2 50 138 A L G > S+ 0 0 7 -17,-2.5 3,-1.7 -2,-0.3 -48,-0.3 0.883 109.4 62.1 -52.6 -36.9 -2.4 -16.5 3.6 51 139 A S G 3 S+ 0 0 79 -18,-0.4 -1,-0.2 1,-0.3 -17,-0.1 0.677 99.3 56.0 -63.6 -18.6 -3.8 -16.8 7.2 52 140 A D G < S+ 0 0 78 -3,-1.6 -39,-0.4 2,-0.1 -1,-0.3 0.435 79.9 112.5 -95.3 -3.0 -2.2 -13.5 8.2 53 141 A L < - 0 0 9 -3,-1.7 2,-0.3 -4,-0.3 -41,-0.2 -0.412 53.1-151.4 -73.9 150.5 -3.9 -11.4 5.4 54 142 A L B -B 11 0A 49 -43,-2.8 -43,-2.3 1,-0.1 -2,-0.1 -0.825 26.9 -79.5-119.2 159.3 -6.3 -8.8 6.5 55 143 A S > - 0 0 48 -2,-0.3 3,-1.6 -45,-0.2 -45,-0.2 -0.228 39.7-122.5 -46.4 138.0 -9.4 -7.0 5.1 56 144 A P T 3 S+ 0 0 57 0, 0.0 -46,-0.1 0, 0.0 -1,-0.1 0.654 109.1 72.3 -66.7 -12.4 -8.5 -4.2 2.7 57 145 A I T 3 S+ 0 0 145 -46,-0.1 2,-0.5 2,-0.0 -2,-0.1 0.793 77.5 90.8 -66.5 -31.2 -10.5 -1.9 5.1 58 146 A C < 0 0 45 -3,-1.6 -46,-0.1 1,-0.2 -4,-0.1 -0.553 360.0 360.0 -68.2 120.7 -7.8 -2.2 7.7 59 147 A E 0 0 176 -2,-0.5 -1,-0.2 -48,-0.1 -39,-0.1 0.356 360.0 360.0-137.0 360.0 -5.3 0.6 7.2