==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN/TRANSCRIPTION 02-SEP-02 1MM3 . COMPND 2 MOLECULE: MI2-BETA(CHROMODOMAIN HELICASE-DNA-BINDING . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.H.Y.KWAN,D.A.GELL,A.VERGER,M.CROSSLEY,J.M.MATTHEWS, . 61 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4801.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 19 31.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 4.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 14.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 94 0, 0.0 3,-0.4 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0-146.7 -18.9 3.8 6.1 2 2 A P + 0 0 130 0, 0.0 2,-1.9 0, 0.0 3,-0.1 0.999 360.0 34.3 -65.7 -74.3 -18.1 6.7 8.5 3 3 A L S > S- 0 0 158 2,-0.1 3,-1.2 1,-0.0 2,-0.1 -0.559 131.6 -75.1 -84.2 73.3 -14.9 8.2 7.1 4 4 A G T 3 S- 0 0 53 -2,-1.9 3,-0.1 -3,-0.4 -1,-0.0 -0.444 91.4 -39.3 71.8-136.4 -15.7 7.5 3.5 5 5 A S T 3 S- 0 0 73 3,-0.2 2,-3.0 -2,-0.1 -1,-0.2 0.476 70.0-147.1 -97.6 -7.5 -15.3 3.8 2.5 6 6 A D S < S+ 0 0 100 -3,-1.2 2,-2.2 2,-0.2 -1,-0.1 -0.351 88.6 73.9 70.7 -58.4 -12.1 3.6 4.7 7 7 A H S S+ 0 0 67 -2,-3.0 2,-0.2 -3,-0.1 -1,-0.2 -0.413 84.4 77.5 -81.7 64.5 -10.7 1.0 2.3 8 8 A H + 0 0 114 -2,-2.2 2,-0.3 19,-0.1 -2,-0.2 -0.638 53.1 139.8-173.6 104.5 -10.0 3.7 -0.3 9 9 A M - 0 0 13 19,-3.0 21,-0.3 -2,-0.2 4,-0.1 -0.951 46.1-146.4-157.4 137.7 -7.1 6.0 -0.1 10 10 A E S S+ 0 0 139 -2,-0.3 2,-0.3 19,-0.1 19,-0.1 -0.014 88.3 55.8 -90.5 27.6 -4.5 7.6 -2.5 11 11 A F S S- 0 0 68 19,-0.1 19,-1.2 10,-0.0 2,-0.3 -0.887 101.9 -61.9-150.2 174.3 -2.0 7.4 0.3 12 12 A C B > -a 30 0A 0 -2,-0.3 4,-0.9 1,-0.1 19,-0.2 -0.492 33.5-143.9 -69.7 131.1 -0.4 5.0 2.8 13 13 A R T 4 S+ 0 0 63 17,-0.7 -1,-0.1 -2,-0.3 18,-0.1 0.838 99.0 16.8 -56.3 -42.2 -2.7 3.3 5.2 14 14 A V T 4 S+ 0 0 100 1,-0.0 -1,-0.1 -3,-0.0 17,-0.1 0.847 130.8 42.3 -98.3 -55.5 -0.1 3.4 8.0 15 15 A C T 4 S- 0 0 52 -4,-0.0 -2,-0.2 1,-0.0 -3,-0.1 0.170 95.6-130.6 -92.7 24.1 2.6 5.9 7.0 16 16 A K < - 0 0 162 -4,-0.9 -3,-0.1 -5,-0.1 15,-0.1 0.851 38.7-176.2 30.9 65.4 0.1 8.5 5.7 17 17 A D + 0 0 45 13,-0.2 4,-0.1 1,-0.1 -7,-0.1 0.005 23.6 173.9 -77.7-170.0 1.8 9.1 2.4 18 18 A G + 0 0 61 2,-0.3 -1,-0.1 -7,-0.1 3,-0.1 0.323 65.5 37.9-166.9 -35.9 0.9 11.7 -0.3 19 19 A G S S+ 0 0 64 1,-0.3 2,-0.3 0, 0.0 -2,-0.1 0.780 109.5 29.9 -94.7 -97.4 3.4 11.8 -3.1 20 20 A E S S+ 0 0 178 2,-0.0 2,-0.4 -9,-0.0 -2,-0.3 -0.514 75.6 174.5 -69.3 126.4 5.1 8.7 -4.4 21 21 A L - 0 0 49 -2,-0.3 2,-0.5 -3,-0.1 11,-0.2 -0.999 27.8-157.1-141.4 140.8 2.8 5.7 -3.9 22 22 A L E -B 31 0A 43 9,-3.2 9,-3.1 -2,-0.4 2,-0.2 -0.971 25.0-175.1-118.5 115.9 2.7 2.0 -4.8 23 23 A C E -B 30 0A 58 -2,-0.5 7,-0.2 7,-0.3 25,-0.1 -0.730 22.9-105.9-113.2 163.7 -0.7 0.5 -5.0 24 24 A C - 0 0 16 5,-1.1 25,-0.2 3,-0.3 -1,-0.1 -0.082 21.2-124.3 -74.0-175.8 -2.2 -3.0 -5.5 25 25 A D S S+ 0 0 158 23,-0.2 -1,-0.1 3,-0.0 24,-0.1 -0.002 105.8 39.3-114.6 19.9 -3.9 -4.3 -8.6 26 26 A T S S+ 0 0 96 1,-0.4 23,-0.0 3,-0.1 -3,-0.0 0.556 112.4 35.8-131.9 -55.4 -7.0 -5.2 -6.6 27 27 A C S S- 0 0 35 2,-0.1 2,-1.0 -19,-0.0 -1,-0.4 -0.684 79.0-110.6-111.1 162.7 -7.9 -2.7 -4.0 28 28 A P S S+ 0 0 64 0, 0.0 -19,-3.0 0, 0.0 2,-0.3 -0.353 74.5 116.1 -92.1 57.5 -7.7 1.2 -3.9 29 29 A S - 0 0 0 -2,-1.0 -5,-1.1 -21,-0.2 2,-0.4 -0.905 47.8-152.5-124.3 149.1 -4.9 1.5 -1.3 30 30 A S E +aB 12 23A 8 -19,-1.2 -17,-0.7 -2,-0.3 -7,-0.3 -0.938 17.9 166.9-124.9 144.4 -1.4 2.9 -1.7 31 31 A Y E - B 0 22A 7 -9,-3.1 -9,-3.2 -2,-0.4 -19,-0.1 -0.851 36.0-113.8-137.7-177.2 1.8 2.0 0.2 32 32 A H - 0 0 73 -2,-0.3 -1,-0.3 -11,-0.2 -10,-0.1 0.437 58.1 -88.6 -83.6-123.0 5.6 2.5 0.2 33 33 A I S S+ 0 0 32 7,-0.1 7,-3.1 10,-0.1 9,-0.2 0.206 120.5 33.1-132.2 8.0 7.4 -0.8 -0.3 34 34 A H S S+ 0 0 91 5,-0.3 5,-0.2 7,-0.1 7,-0.0 0.139 75.1 110.8-153.3 22.9 7.7 -1.8 3.4 35 35 A C S S+ 0 0 25 3,-0.1 2,-0.2 5,-0.0 4,-0.1 0.703 77.1 60.9 -75.9 -20.7 4.5 -0.5 5.1 36 36 A L S S- 0 0 14 2,-0.2 19,-0.1 1,-0.1 3,-0.1 -0.515 99.1-102.9-100.3 172.5 3.3 -4.1 5.5 37 37 A R S S+ 0 0 181 1,-0.2 2,-2.7 -2,-0.2 -1,-0.1 0.959 116.6 62.7 -61.6 -51.3 4.9 -7.1 7.4 38 38 A P S S- 0 0 72 0, 0.0 -1,-0.2 0, 0.0 2,-0.2 -0.451 88.4-180.0 -71.9 68.8 6.1 -8.7 4.1 39 39 A A - 0 0 51 -2,-2.7 2,-0.3 -5,-0.2 -5,-0.3 -0.528 19.1-154.1 -80.6 148.9 8.3 -5.7 3.5 40 40 A L - 0 0 44 -7,-3.1 -7,-0.1 -2,-0.2 -4,-0.0 -0.895 17.4-165.5-117.4 151.2 10.6 -5.1 0.6 41 41 A Y S S+ 0 0 211 -2,-0.3 2,-0.3 2,-0.0 -1,-0.1 0.489 78.7 71.3-107.4 -7.5 13.8 -3.0 0.4 42 42 A E S S- 0 0 122 -9,-0.2 -2,-0.1 0, 0.0 0, 0.0 -0.767 90.7-112.1-105.5 151.3 13.7 -3.2 -3.3 43 43 A V - 0 0 118 -2,-0.3 2,-1.0 1,-0.1 3,-0.1 -0.742 28.5-129.8 -85.9 117.5 11.2 -1.5 -5.6 44 44 A P - 0 0 30 0, 0.0 -1,-0.1 0, 0.0 -4,-0.0 -0.554 26.8-177.9 -70.6 98.2 9.0 -4.1 -7.3 45 45 A D S S+ 0 0 167 -2,-1.0 3,-0.1 2,-0.0 -2,-0.0 0.700 74.8 34.0 -73.9 -19.2 9.3 -3.1 -11.0 46 46 A G S S- 0 0 49 1,-0.4 2,-0.2 -3,-0.1 -3,-0.0 0.758 120.5 -14.6 -97.9 -95.9 6.8 -5.8 -12.0 47 47 A E + 0 0 175 2,-0.0 -1,-0.4 -22,-0.0 2,-0.3 -0.715 54.8 171.6-112.4 165.3 4.0 -6.8 -9.8 48 48 A W - 0 0 31 -2,-0.2 2,-0.3 -3,-0.1 -23,-0.2 -0.882 4.8-175.6-170.9 138.5 3.1 -6.2 -6.2 49 49 A Q - 0 0 111 -2,-0.3 11,-0.0 -25,-0.2 -25,-0.0 -0.928 29.1 -98.3-139.7 162.9 0.2 -6.8 -3.8 50 50 A C - 0 0 10 -2,-0.3 -27,-0.0 1,-0.1 -1,-0.0 -0.280 28.1-120.1 -70.9 163.8 -0.9 -6.1 -0.3 51 51 A P S S- 0 0 7 0, 0.0 -1,-0.1 0, 0.0 4,-0.1 0.973 95.7 -44.3 -67.0 -46.4 -0.7 -8.6 2.6 52 52 A R S S- 0 0 143 2,-0.3 3,-0.1 -3,-0.0 7,-0.0 0.069 78.3-102.1-167.2 19.6 -4.4 -8.3 2.9 53 53 A C S S+ 0 0 2 1,-0.2 2,-0.2 -26,-0.0 -3,-0.0 0.851 103.7 58.3 49.3 39.3 -4.7 -4.5 2.7 54 54 A T S S- 0 0 62 -47,-0.0 -2,-0.3 1,-0.0 -1,-0.2 -0.811 106.1 -11.4-163.1-160.3 -5.1 -4.5 6.4 55 55 A C > - 0 0 87 -2,-0.2 2,-1.3 1,-0.2 3,-0.9 -0.356 62.5-137.6 -56.6 117.9 -3.3 -5.6 9.6 56 56 A P T 3 S+ 0 0 41 0, 0.0 -1,-0.2 0, 0.0 4,-0.1 -0.165 76.9 104.0 -80.7 48.0 -0.4 -7.9 8.4 57 57 A A T 3 + 0 0 81 -2,-1.3 2,-0.1 2,-0.1 -2,-0.1 0.657 69.1 73.1 -95.8 -19.6 -0.9 -10.6 11.1 58 58 A L S < S- 0 0 103 -3,-0.9 2,-0.8 1,-0.1 -6,-0.0 -0.349 100.0 -87.1 -87.4 172.5 -2.6 -12.9 8.6 59 59 A K + 0 0 153 1,-0.2 -1,-0.1 -2,-0.1 -2,-0.1 -0.722 43.3 170.7 -85.0 112.7 -0.9 -14.9 5.8 60 60 A G 0 0 25 -2,-0.8 -1,-0.2 -4,-0.1 -3,-0.0 0.815 360.0 360.0 -88.2 -33.0 -0.7 -12.7 2.7 61 61 A K 0 0 222 0, 0.0 -2,-0.1 0, 0.0 0, 0.0 0.475 360.0 360.0-133.5 360.0 1.5 -15.1 0.7