==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 08-OCT-96 1MSI . COMPND 2 MOLECULE: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12; . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR Z.JIA,C.I.DELUCA,H.CHAO,P.L.DAVIES . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3653.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 37 56.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 145 0, 0.0 2,-2.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-124.6 19.3 25.6 29.1 2 1 A A + 0 0 84 25,-0.1 2,-0.6 2,-0.0 25,-0.0 -0.038 360.0 138.3 -72.8 50.0 18.2 25.6 25.4 3 2 A Q - 0 0 90 -2,-2.7 25,-0.4 25,-0.1 2,-0.3 -0.775 47.4-141.6 -87.2 123.7 21.0 23.6 23.7 4 3 A A - 0 0 26 -2,-0.6 31,-2.3 23,-0.2 2,-0.3 -0.673 13.7-155.6 -89.1 145.3 19.0 21.4 21.3 5 4 A S E -AB 26 34A 0 21,-3.2 21,-2.1 -2,-0.3 2,-0.4 -0.766 29.4 -94.1-113.7 165.4 19.9 17.8 20.5 6 5 A V E -A 25 0A 0 27,-2.4 50,-2.6 50,-0.3 2,-0.4 -0.657 44.8-171.8 -76.3 129.8 19.3 15.6 17.6 7 6 A V E -AC 24 55A 2 17,-2.3 17,-2.8 -2,-0.4 2,-0.3 -0.971 31.6-103.1-127.2 137.4 16.1 13.6 18.2 8 7 A A E -A 23 0A 0 46,-2.7 45,-2.5 -2,-0.4 15,-0.2 -0.423 25.4-165.5 -65.8 121.0 14.8 10.7 16.0 9 8 A N S S+ 0 0 69 13,-2.9 2,-0.3 -2,-0.3 14,-0.2 0.516 78.2 6.8 -87.4 -6.1 12.0 12.0 13.8 10 9 A Q S S- 0 0 74 12,-0.6 2,-0.4 40,-0.1 43,-0.1 -0.926 105.0 -70.2-158.7 168.1 11.1 8.4 13.0 11 10 A L - 0 0 92 -2,-0.3 38,-0.0 41,-0.1 -2,-0.0 -0.601 49.3-150.9 -63.2 127.6 12.2 4.9 14.1 12 11 A I B -D 50 0B 0 38,-2.9 38,-2.9 -2,-0.4 3,-0.1 -0.922 15.7-135.1-101.9 115.4 15.8 4.7 12.7 13 12 A P > - 0 0 55 0, 0.0 3,-0.9 0, 0.0 33,-0.3 -0.298 31.8 -82.8 -67.8 157.6 16.5 0.9 12.0 14 13 A I T 3 S+ 0 0 97 1,-0.2 33,-0.2 33,-0.1 35,-0.1 -0.132 111.6 10.7 -54.8 146.3 19.8 -0.7 13.0 15 14 A N T 3 S+ 0 0 84 31,-1.5 2,-0.4 1,-0.2 -1,-0.2 0.849 94.3 139.3 51.3 39.2 22.6 -0.2 10.5 16 15 A T < - 0 0 43 -3,-0.9 30,-1.6 30,-0.2 2,-0.3 -0.936 56.2-117.5-116.1 138.1 20.7 2.3 8.5 17 16 A A B -E 45 0C 41 -2,-0.4 28,-0.2 28,-0.2 2,-0.2 -0.583 34.3-115.1 -75.5 134.7 22.3 5.4 7.1 18 17 A L - 0 0 1 26,-2.7 25,-2.8 23,-0.4 2,-0.3 -0.468 32.2-174.0 -72.7 135.3 20.9 8.6 8.5 19 18 A T > - 0 0 58 23,-0.2 3,-1.5 -2,-0.2 4,-0.3 -0.844 39.8-102.8-120.8 166.1 19.1 11.0 6.1 20 19 A L G > S+ 0 0 113 -2,-0.3 3,-1.3 1,-0.3 -2,-0.0 0.814 117.3 62.0 -63.1 -29.3 17.7 14.5 7.0 21 20 A V G 3 S+ 0 0 95 1,-0.2 -1,-0.3 -12,-0.0 -3,-0.0 0.705 98.3 61.5 -68.7 -15.0 14.1 13.3 7.3 22 21 A M G < S+ 0 0 17 -3,-1.5 -13,-2.9 1,-0.1 -12,-0.6 0.607 97.9 62.8 -83.4 -10.0 15.2 11.1 10.2 23 22 A M E < +A 8 0A 14 -3,-1.3 2,-0.2 -4,-0.3 -15,-0.2 -0.946 50.3 166.1-131.8 120.3 16.5 13.9 12.5 24 23 A R E -A 7 0A 85 -17,-2.8 -17,-2.3 -2,-0.5 2,-0.4 -0.637 31.9-121.6-112.6 179.3 14.7 16.8 14.1 25 24 A S E +A 6 0A 67 -19,-0.2 2,-0.3 -2,-0.2 -19,-0.2 -0.975 33.7 163.2-127.1 143.8 16.1 19.0 16.9 26 25 A E E -A 5 0A 75 -21,-2.1 -21,-3.2 -2,-0.4 2,-0.9 -0.977 44.2-110.3-151.8 155.4 14.6 19.5 20.3 27 26 A V + 0 0 90 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.816 59.5 150.6 -90.2 105.9 15.6 20.8 23.7 28 27 A V - 0 0 35 -2,-0.9 4,-0.1 -25,-0.4 -25,-0.1 -0.816 40.4 -97.6-131.6 163.8 15.6 17.6 25.7 29 28 A T S S+ 0 0 132 -2,-0.3 2,-0.2 2,-0.1 26,-0.0 -0.996 99.9 44.5-134.0 139.3 17.5 16.3 28.7 30 29 A P S S- 0 0 98 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 0.535 97.8-122.3 -66.8 159.7 19.8 14.6 28.8 31 30 A V - 0 0 72 -2,-0.2 -2,-0.1 1,-0.1 2,-0.1 -0.589 35.2-179.1 -76.2 131.1 21.7 16.4 26.1 32 31 A G - 0 0 7 -2,-0.3 25,-0.2 1,-0.3 3,-0.1 -0.094 50.4 -22.8-105.2-152.1 22.6 14.3 23.1 33 32 A I S S- 0 0 0 23,-2.7 -27,-2.4 -27,-0.2 -1,-0.3 -0.360 82.6-103.0 -59.3 129.8 24.5 15.1 19.9 34 33 A P B > -B 5 0A 25 0, 0.0 3,-2.1 0, 0.0 -29,-0.3 -0.296 20.7-122.3 -61.8 143.7 24.1 18.9 19.2 35 34 A A G > S+ 0 0 25 -31,-2.3 3,-1.8 1,-0.3 -30,-0.1 0.812 108.9 69.1 -54.7 -30.5 21.6 19.9 16.6 36 35 A E G 3 S+ 0 0 138 -32,-0.3 4,-0.3 1,-0.3 -1,-0.3 0.765 90.7 63.0 -59.5 -28.0 24.4 21.7 14.7 37 36 A D G <> + 0 0 18 -3,-2.1 4,-1.7 1,-0.2 3,-0.5 0.548 68.9 101.7 -80.2 -2.3 25.9 18.3 13.9 38 37 A I H <> S+ 0 0 23 -3,-1.8 4,-1.1 1,-0.2 3,-0.3 0.881 80.2 52.9 -50.4 -47.6 22.9 17.0 11.8 39 38 A P H >4 S+ 0 0 95 0, 0.0 3,-0.7 0, 0.0 -1,-0.2 0.928 109.6 51.2 -51.4 -43.0 24.8 17.8 8.5 40 39 A R H 34 S+ 0 0 114 -3,-0.5 -2,-0.2 -4,-0.3 -3,-0.1 0.882 105.3 55.2 -61.5 -38.7 27.7 15.7 9.8 41 40 A L H >< S+ 0 0 0 -4,-1.7 3,-2.4 -3,-0.3 -23,-0.4 0.684 77.6 116.6 -73.0 -20.8 25.5 12.8 10.7 42 41 A V T << S+ 0 0 52 -4,-1.1 -23,-0.2 -3,-0.7 3,-0.1 -0.339 87.2 7.8 -56.5 128.0 24.0 12.4 7.2 43 42 A S T 3 S+ 0 0 90 -25,-2.8 -1,-0.3 1,-0.3 2,-0.2 0.231 98.7 121.5 77.1 0.7 25.0 9.0 5.8 44 43 A M < - 0 0 49 -3,-2.4 -26,-2.7 -26,-0.1 -1,-0.3 -0.587 60.9-125.2 -82.5 151.8 26.5 7.8 9.0 45 44 A Q B -E 17 0C 75 17,-0.4 17,-3.1 -28,-0.2 2,-0.2 -0.759 8.4-128.5-100.9 147.5 24.9 4.6 10.3 46 45 A V B -F 61 0D 0 -30,-1.6 -31,-1.5 -33,-0.3 15,-0.2 -0.594 8.2-147.1 -86.0 152.6 23.4 3.9 13.7 47 46 A N S S+ 0 0 61 13,-2.4 2,-0.3 -2,-0.2 14,-0.1 0.326 80.9 29.8-102.5 8.9 24.6 0.9 15.6 48 47 A R S S- 0 0 94 12,-0.4 2,-0.3 -35,-0.2 -32,-0.2 -0.969 97.1 -86.3-155.2 156.7 21.2 0.2 17.2 49 48 A A - 0 0 54 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.583 41.2-152.7 -64.8 135.5 17.5 0.7 16.4 50 49 A V B -D 12 0B 1 -38,-2.9 -38,-2.9 -2,-0.3 -40,-0.1 -0.929 12.0-140.2-114.8 104.3 16.6 4.2 17.6 51 50 A P > - 0 0 72 0, 0.0 3,-2.0 0, 0.0 -43,-0.3 -0.218 38.0 -75.0 -58.5 154.6 12.9 4.5 18.5 52 51 A L T 3 S+ 0 0 112 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.150 119.0 17.0 -49.3 131.9 10.9 7.6 17.6 53 52 A G T 3 S+ 0 0 36 -45,-2.5 2,-0.3 1,-0.3 -1,-0.3 0.504 89.1 140.4 81.7 4.1 11.6 10.6 19.8 54 53 A T < - 0 0 41 -3,-2.0 -46,-2.7 -4,-0.1 2,-0.4 -0.608 56.5-119.1 -78.9 138.5 14.9 9.1 21.1 55 54 A T B -C 7 0A 23 -2,-0.3 2,-0.4 -48,-0.2 -48,-0.3 -0.656 28.7-123.3 -74.5 129.6 17.8 11.6 21.6 56 55 A L - 0 0 0 -50,-2.6 -23,-2.7 -2,-0.4 -50,-0.3 -0.614 30.1-161.8 -78.5 125.2 20.7 10.5 19.4 57 56 A M > - 0 0 40 -2,-0.4 3,-2.0 -25,-0.2 4,-0.4 -0.774 30.0-110.7-107.7 152.5 23.7 10.0 21.6 58 57 A P G > S+ 0 0 66 0, 0.0 3,-1.3 0, 0.0 6,-0.3 0.867 116.3 58.6 -51.5 -38.4 27.4 9.9 20.3 59 58 A D G 3 S+ 0 0 98 1,-0.2 -12,-0.1 4,-0.1 4,-0.1 0.548 97.5 61.9 -73.8 -5.2 27.7 6.2 21.2 60 59 A M G < S+ 0 0 21 -3,-2.0 -13,-2.4 -14,-0.1 2,-0.6 0.585 91.3 74.1 -92.9 -11.7 24.7 5.3 18.8 61 60 A V B X S-F 46 0D 6 -3,-1.3 3,-1.8 -4,-0.4 2,-0.3 -0.908 82.2-128.1-114.2 122.3 26.4 6.6 15.6 62 61 A K T 3 S+ 0 0 85 -17,-3.1 -17,-0.4 -2,-0.6 3,-0.1 -0.486 92.9 8.6 -70.9 124.3 29.1 4.6 14.0 63 62 A G T 3 S+ 0 0 73 -2,-0.3 2,-0.4 1,-0.3 -1,-0.3 0.485 89.7 145.2 89.1 4.4 32.1 6.6 13.4 64 63 A Y < + 0 0 31 -3,-1.8 2,-0.3 -6,-0.3 -1,-0.3 -0.623 12.0 159.8 -84.6 131.0 30.9 9.7 15.3 65 64 A A 0 0 71 -2,-0.4 -3,-0.0 1,-0.1 0, 0.0 -0.967 360.0 360.0-138.5 133.9 33.5 11.8 17.1 66 65 A A 0 0 103 -2,-0.3 -1,-0.1 -33,-0.0 -33,-0.0 0.976 360.0 360.0 -81.2 360.0 32.6 15.5 17.9