==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 1MSJ . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3635.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 19.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 128 0, 0.0 26,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-170.8 19.5 24.6 30.2 2 1 A N + 0 0 95 2,-0.1 2,-0.6 25,-0.0 25,-0.0 0.341 360.0 126.5 -97.8 -4.1 18.6 26.3 27.0 3 2 A Q - 0 0 85 24,-0.1 25,-0.4 1,-0.1 2,-0.3 -0.417 45.4-161.9 -69.8 107.6 20.9 23.6 25.4 4 3 A A - 0 0 18 -2,-0.6 31,-2.4 23,-0.2 32,-0.3 -0.643 3.3-158.5 -85.7 141.4 19.1 21.8 22.7 5 4 A S E -AB 26 34A 0 21,-3.0 21,-2.4 -2,-0.3 2,-0.5 -0.657 30.3 -90.2-114.6 170.6 20.2 18.4 21.3 6 5 A V E -A 25 0A 0 27,-2.1 50,-2.8 50,-0.3 2,-0.4 -0.697 46.2-174.8 -78.5 125.4 19.6 16.5 18.1 7 6 A V E -AC 24 55A 0 17,-2.5 17,-2.8 -2,-0.5 48,-0.2 -0.959 31.8-104.2-126.6 137.9 16.5 14.3 18.4 8 7 A A E -A 23 0A 0 46,-2.6 45,-2.6 -2,-0.4 15,-0.2 -0.439 23.5-166.1 -62.6 127.5 15.3 11.8 15.8 9 8 A N S S+ 0 0 72 13,-3.1 2,-0.3 -2,-0.2 14,-0.2 0.444 78.5 8.9 -94.2 -2.1 12.3 13.1 13.8 10 9 A Q S S- 0 0 71 12,-0.6 2,-0.4 41,-0.1 43,-0.1 -0.944 103.5 -71.8-160.3 168.9 11.6 9.6 12.5 11 10 A L - 0 0 91 -2,-0.3 38,-0.0 41,-0.1 -2,-0.0 -0.640 45.0-154.0 -71.9 124.8 13.0 6.1 13.1 12 11 A I B -D 50 0B 0 38,-2.9 38,-3.2 -2,-0.4 3,-0.1 -0.943 16.9-139.4-101.4 108.6 16.4 6.2 11.7 13 12 A P > - 0 0 61 0, 0.0 3,-1.8 0, 0.0 33,-0.3 -0.325 34.2 -75.3 -69.0 160.0 17.1 2.5 10.8 14 13 A I T 3 S+ 0 0 95 1,-0.3 33,-0.2 33,-0.1 35,-0.1 -0.236 113.1 7.7 -64.4 137.8 20.5 0.9 11.4 15 14 A N T 3 S+ 0 0 82 31,-1.3 -1,-0.3 1,-0.3 2,-0.2 0.383 90.9 137.2 70.3 10.6 23.2 1.8 9.1 16 15 A V < - 0 0 39 -3,-1.8 30,-1.6 32,-0.1 2,-0.5 -0.501 57.7-114.4 -83.2 149.6 21.3 4.5 7.2 17 16 A A B -E 45 0C 45 28,-0.2 28,-0.2 -2,-0.2 25,-0.1 -0.738 36.7-111.2 -85.4 124.9 23.0 7.8 6.4 18 17 A L - 0 0 1 26,-2.7 25,-2.6 -2,-0.5 2,-0.3 -0.277 34.1-173.2 -55.9 131.6 21.5 10.8 8.1 19 18 A T > - 0 0 56 23,-0.2 3,-1.6 24,-0.1 4,-0.4 -0.895 38.8-105.3-123.7 165.3 19.6 13.4 6.2 20 19 A L G > S+ 0 0 105 -2,-0.3 3,-0.7 1,-0.3 -2,-0.0 0.716 115.9 63.3 -61.9 -25.8 18.2 16.7 7.4 21 20 A V G 3 S+ 0 0 93 1,-0.2 -1,-0.3 3,-0.0 -3,-0.0 0.762 99.4 57.3 -68.1 -26.0 14.6 15.4 7.5 22 21 A M G < S+ 0 0 15 -3,-1.6 -13,-3.1 1,-0.1 -12,-0.6 0.657 97.4 72.4 -79.6 -14.8 15.6 12.9 10.2 23 22 A M E < +A 8 0A 16 -3,-0.7 2,-0.2 -4,-0.4 -15,-0.2 -0.904 49.7 169.0-120.0 118.1 16.9 15.5 12.7 24 23 A R E -A 7 0A 86 -17,-2.8 -17,-2.5 -2,-0.5 2,-0.4 -0.669 30.8-121.6-108.7 176.4 15.1 18.0 14.9 25 24 A S E +A 6 0A 66 -19,-0.2 2,-0.3 -2,-0.2 -19,-0.2 -0.970 38.3 159.0-119.1 128.4 16.4 20.2 17.7 26 25 A E E -A 5 0A 73 -21,-2.4 -21,-3.0 -2,-0.4 2,-1.1 -0.992 47.7-113.7-151.5 150.8 14.9 19.9 21.3 27 26 A V + 0 0 91 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.709 59.2 153.5 -81.6 98.4 15.8 20.7 24.9 28 27 A V - 0 0 32 -2,-1.1 4,-0.1 -25,-0.4 -2,-0.0 -0.853 39.0-101.0-123.3 159.4 15.9 17.1 26.2 29 28 A T S S+ 0 0 131 -2,-0.3 2,-0.1 2,-0.1 26,-0.1 -0.995 99.3 43.4-124.6 141.7 17.8 15.3 29.1 30 29 A P S S- 0 0 96 0, 0.0 2,-0.2 0, 0.0 -2,-0.1 0.547 96.7-124.0 -69.2 162.7 20.2 13.7 28.9 31 30 A V + 0 0 79 -2,-0.1 2,-0.1 1,-0.1 -2,-0.1 -0.545 36.4 173.5 -75.7 137.4 22.0 16.0 26.6 32 31 A G - 0 0 10 1,-0.4 25,-0.3 -2,-0.2 -1,-0.1 -0.144 52.0 -14.1-116.8-142.0 23.3 14.4 23.3 33 32 A I S S- 0 0 0 23,-3.1 -27,-2.1 -27,-0.2 -1,-0.4 -0.409 83.0-104.4 -61.2 132.0 24.9 15.8 20.2 34 33 A P B > -B 5 0A 36 0, 0.0 3,-1.9 0, 0.0 -29,-0.3 -0.386 22.4-126.0 -61.8 137.4 24.4 19.7 20.2 35 34 A A G > S+ 0 0 16 -31,-2.4 3,-2.3 1,-0.3 -30,-0.1 0.823 105.0 72.8 -59.1 -26.3 21.7 20.8 17.8 36 35 A E G 3 S+ 0 0 140 -32,-0.3 -1,-0.3 1,-0.3 4,-0.2 0.785 89.9 62.1 -55.7 -27.1 24.3 23.2 16.2 37 36 A D G X + 0 0 14 -3,-1.9 3,-0.5 1,-0.2 4,-0.3 0.463 65.9 103.7 -81.2 -3.6 25.9 20.2 14.6 38 37 A I G X> S+ 0 0 24 -3,-2.3 3,-1.4 1,-0.2 4,-0.7 0.881 79.3 57.8 -51.2 -41.5 22.9 19.0 12.6 39 38 A P G >4 S+ 0 0 99 0, 0.0 3,-0.9 0, 0.0 -1,-0.2 0.932 107.6 45.0 -42.1 -53.6 24.8 20.5 9.4 40 39 A R G <4 S+ 0 0 112 -3,-0.5 -2,-0.2 1,-0.2 -3,-0.1 0.279 102.2 65.9 -90.3 20.8 27.8 18.4 9.9 41 40 A L G X4 S+ 0 0 0 -3,-1.4 3,-2.1 -4,-0.3 -23,-0.3 0.558 70.3 115.6-108.4 -19.0 26.0 15.1 10.6 42 41 A V T << S+ 0 0 56 -3,-0.9 -23,-0.2 -4,-0.7 3,-0.1 -0.285 82.7 15.3 -59.3 136.1 24.4 14.8 7.1 43 42 A S T 3 S+ 0 0 95 -25,-2.6 -1,-0.3 1,-0.3 2,-0.2 0.265 97.1 117.6 81.6 -6.7 25.7 11.7 5.2 44 43 A M < - 0 0 46 -3,-2.1 -26,-2.7 -26,-0.2 -1,-0.3 -0.603 61.9-126.7 -85.2 150.1 27.2 10.1 8.4 45 44 A Q B -E 17 0C 78 17,-0.3 17,-3.1 -28,-0.2 2,-0.3 -0.720 7.6-129.3-101.4 157.9 25.7 6.7 9.3 46 45 A V B -F 61 0D 0 -30,-1.6 -31,-1.3 -33,-0.3 15,-0.2 -0.710 9.8-144.4 -96.2 152.3 24.2 5.6 12.6 47 46 A N S S+ 0 0 62 13,-2.2 2,-0.3 -2,-0.3 14,-0.1 0.269 79.8 24.5-105.7 12.0 25.4 2.4 14.0 48 47 A R S S- 0 0 97 12,-0.3 2,-0.2 -35,-0.1 -33,-0.2 -0.949 96.9 -79.3-160.9 165.4 22.1 1.3 15.5 49 48 A A - 0 0 53 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.551 39.5-156.5 -71.4 132.3 18.4 1.9 15.0 50 49 A V B -D 12 0B 1 -38,-3.2 -38,-2.9 -2,-0.2 -40,-0.1 -0.958 12.3-142.4-115.3 106.8 17.3 5.3 16.5 51 50 A P > - 0 0 67 0, 0.0 3,-2.0 0, 0.0 -43,-0.3 -0.307 37.8 -78.4 -56.7 152.0 13.5 5.3 17.3 52 51 A L T 3 S+ 0 0 107 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.323 121.0 21.5 -52.3 133.8 11.5 8.5 16.7 53 52 A G T 3 S+ 0 0 36 -45,-2.6 2,-0.3 1,-0.3 -1,-0.3 0.451 90.0 136.1 85.3 1.8 12.0 10.9 19.6 54 53 A T < - 0 0 44 -3,-2.0 -46,-2.6 1,-0.0 -1,-0.3 -0.655 58.1-120.3 -82.4 134.2 15.4 9.4 20.6 55 54 A T B -C 7 0A 21 -2,-0.3 2,-0.6 -48,-0.2 -48,-0.3 -0.567 27.9-122.7 -70.0 137.3 18.2 11.8 21.4 56 55 A L - 0 0 0 -50,-2.8 -23,-3.1 -2,-0.2 -50,-0.3 -0.759 29.7-160.8 -87.5 123.4 21.2 11.2 19.1 57 56 A M >> - 0 0 40 -2,-0.6 3,-2.2 -25,-0.3 4,-0.5 -0.708 28.8-111.9-100.7 154.2 24.3 10.5 21.2 58 57 A P G >4 S+ 0 0 58 0, 0.0 3,-1.3 0, 0.0 6,-0.3 0.861 115.8 57.5 -54.1 -39.9 28.0 10.7 20.0 59 58 A D G 34 S+ 0 0 97 1,-0.3 -12,-0.1 3,-0.0 -3,-0.0 0.569 97.1 63.0 -69.8 -8.2 28.4 6.9 20.2 60 59 A M G <4 S+ 0 0 21 -3,-2.2 -13,-2.2 -14,-0.1 2,-0.6 0.651 89.9 78.6 -92.2 -15.4 25.5 6.3 17.8 61 60 A V B X< S-F 46 0D 7 -3,-1.3 3,-1.3 -4,-0.5 2,-0.3 -0.834 79.9-130.2-106.1 129.2 27.2 8.1 14.8 62 61 A K T 3 S+ 0 0 81 -17,-3.1 -17,-0.3 -2,-0.6 3,-0.1 -0.524 92.2 5.2 -69.4 125.4 29.9 6.4 12.9 63 62 A G T 3 S+ 0 0 76 -2,-0.3 2,-0.4 1,-0.2 -1,-0.3 0.453 94.3 141.0 80.2 0.5 32.9 8.5 12.5 64 63 A Y < + 0 0 30 -3,-1.3 2,-0.3 -6,-0.3 -1,-0.2 -0.634 19.1 167.5 -82.2 132.0 31.6 11.3 14.8 65 64 A A 0 0 73 -2,-0.4 -3,-0.0 1,-0.1 -6,-0.0 -0.914 360.0 360.0-131.2 156.1 34.0 13.0 17.1 66 65 A A 0 0 116 -2,-0.3 -1,-0.1 -33,-0.0 -33,-0.0 0.391 360.0 360.0 -21.9 360.0 33.0 16.4 18.9