==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 2MSJ . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3730.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 57.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 25.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 133 0, 0.0 2,-1.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -93.1 19.4 25.1 30.7 2 1 A N + 0 0 90 25,-0.1 2,-0.5 2,-0.0 25,-0.0 -0.147 360.0 140.4-103.7 55.2 18.1 25.6 27.0 3 2 A Q - 0 0 122 -2,-1.0 25,-0.6 25,-0.1 2,-0.3 -0.760 43.9-139.4 -90.5 127.0 20.6 23.5 25.1 4 3 A A E -A 27 0A 24 -2,-0.5 31,-2.5 23,-0.2 32,-0.3 -0.690 16.4-163.9 -93.5 142.6 18.9 21.6 22.3 5 4 A S E -AB 26 34A 1 21,-3.1 21,-1.9 -2,-0.3 2,-0.4 -0.734 30.5 -96.2-120.2 162.8 19.8 18.0 21.4 6 5 A V E -A 25 0A 0 27,-2.0 50,-2.7 50,-0.3 2,-0.4 -0.700 43.1-170.4 -77.2 126.0 19.1 15.7 18.3 7 6 A V E -AC 24 55A 0 17,-2.2 17,-2.3 -2,-0.4 2,-0.3 -0.982 31.8-102.2-122.5 137.1 16.0 13.6 18.9 8 7 A A E -A 23 0A 0 46,-2.7 45,-2.6 -2,-0.4 15,-0.2 -0.417 29.6-169.4 -57.2 118.9 14.9 10.8 16.7 9 8 A N S S+ 0 0 65 13,-2.9 2,-0.3 -2,-0.3 14,-0.2 0.675 74.0 3.1 -89.9 -19.9 12.1 12.0 14.5 10 9 A Q S S- 0 0 82 12,-0.6 2,-0.2 40,-0.1 -1,-0.1 -0.897 103.9 -66.3-149.6 172.3 11.3 8.5 13.2 11 10 A L - 0 0 93 -2,-0.3 38,-0.0 41,-0.1 -2,-0.0 -0.523 47.3-155.3 -61.2 130.0 12.5 5.0 14.0 12 11 A I B -D 50 0B 0 38,-1.9 38,-3.0 -2,-0.2 3,-0.1 -0.974 17.1-136.7-107.4 113.4 16.1 4.9 12.7 13 12 A P > - 0 0 60 0, 0.0 3,-0.9 0, 0.0 33,-0.3 -0.330 31.0 -83.9 -69.5 156.4 16.9 1.3 12.0 14 13 A I T 3 S+ 0 0 91 1,-0.2 33,-0.2 33,-0.1 35,-0.1 -0.148 110.8 8.5 -52.1 142.7 20.2 -0.3 13.0 15 14 A N T 3 S+ 0 0 81 31,-1.8 2,-0.4 1,-0.1 -1,-0.2 0.803 93.5 129.1 49.0 41.7 23.0 0.3 10.5 16 15 A T < - 0 0 48 -3,-0.9 30,-1.0 30,-0.2 -1,-0.1 -0.988 63.5-113.4-122.8 128.2 21.2 2.7 8.3 17 16 A A B -E 45 0C 39 -2,-0.4 28,-0.3 28,-0.2 27,-0.1 -0.443 37.3-107.9 -66.2 139.3 22.8 6.1 7.5 18 17 A L - 0 0 2 26,-3.0 25,-2.8 23,-0.5 2,-0.3 -0.440 31.9-165.3 -75.5 136.9 21.1 9.1 9.0 19 18 A T > - 0 0 63 23,-0.2 3,-2.0 -2,-0.1 4,-0.4 -0.854 35.5-109.6-113.7 159.9 19.1 11.4 6.8 20 19 A L G > S+ 0 0 108 -2,-0.3 3,-1.3 1,-0.3 -1,-0.0 0.801 115.8 65.2 -63.7 -23.0 17.9 14.9 7.8 21 20 A V G 3 S+ 0 0 93 1,-0.3 -1,-0.3 -12,-0.0 -3,-0.0 0.707 97.8 58.5 -71.2 -14.9 14.3 13.7 7.9 22 21 A M G < S+ 0 0 16 -3,-2.0 -13,-2.9 -13,-0.1 -12,-0.6 0.615 98.9 68.5 -86.4 -10.2 15.3 11.4 10.8 23 22 A M E < +A 8 0A 15 -3,-1.3 2,-0.2 -4,-0.4 -15,-0.2 -0.924 49.5 167.1-124.6 130.5 16.6 14.2 13.0 24 23 A R E -A 7 0A 85 -17,-2.3 -17,-2.2 -2,-0.4 2,-0.4 -0.725 31.8-119.9-123.9 176.6 14.9 17.1 14.9 25 24 A S E +A 6 0A 68 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.934 37.5 159.9-121.7 143.7 16.2 19.4 17.6 26 25 A E E -A 5 0A 83 -21,-1.9 -21,-3.1 -2,-0.4 2,-0.5 -0.960 43.4-115.2-165.3 140.7 14.6 19.6 21.1 27 26 A V E +A 4 0A 81 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.734 56.0 146.8 -83.0 124.0 15.6 20.8 24.6 28 27 A V - 0 0 33 -25,-0.6 4,-0.1 -2,-0.5 -25,-0.1 -0.949 41.5 -91.6-150.1 160.0 15.6 17.5 26.8 29 28 A T S S+ 0 0 133 -2,-0.3 2,-0.1 2,-0.1 26,-0.0 -0.999 102.3 43.0-132.0 145.5 17.5 16.1 29.8 30 29 A P S S- 0 0 101 0, 0.0 2,-0.1 0, 0.0 25,-0.0 0.516 98.8-123.3 -49.2 152.0 20.0 14.4 29.9 31 30 A V + 0 0 68 -2,-0.1 2,-0.1 1,-0.1 -2,-0.1 -0.496 37.2 179.5 -71.6 145.7 21.7 16.5 27.1 32 31 A G - 0 0 9 1,-0.3 25,-0.2 -4,-0.1 -1,-0.1 -0.202 48.8 -18.7-121.4-143.9 22.7 14.4 24.2 33 32 A I S S- 0 0 0 23,-2.8 -27,-2.0 -27,-0.2 -1,-0.3 -0.508 83.2-103.9 -67.3 126.6 24.4 15.2 20.9 34 33 A P B > -B 5 0A 52 0, 0.0 3,-2.0 0, 0.0 -29,-0.3 -0.264 17.4-125.1 -53.5 140.1 24.0 19.0 20.2 35 34 A A G > S+ 0 0 12 -31,-2.5 3,-2.1 1,-0.3 -30,-0.1 0.815 106.7 68.8 -51.3 -35.4 21.5 20.1 17.7 36 35 A E G 3 S+ 0 0 147 1,-0.3 -1,-0.3 -32,-0.3 4,-0.2 0.818 90.5 64.1 -57.2 -34.5 24.2 22.0 15.8 37 36 A D G X> + 0 0 37 -3,-2.0 4,-1.7 1,-0.2 3,-0.5 0.412 67.1 101.5 -79.7 6.1 25.8 18.8 14.9 38 37 A I H <> S+ 0 0 21 -3,-2.1 4,-1.2 1,-0.2 3,-0.3 0.953 79.8 56.1 -53.3 -48.2 22.8 17.5 12.7 39 38 A P H 34 S+ 0 0 102 0, 0.0 -1,-0.2 0, 0.0 3,-0.1 0.844 108.8 48.7 -43.8 -40.5 24.8 18.6 9.4 40 39 A R H <4 S+ 0 0 91 -3,-0.5 -2,-0.2 -4,-0.2 4,-0.2 0.911 105.0 57.4 -71.0 -38.5 27.6 16.4 10.5 41 40 A L H >< S+ 0 0 0 -4,-1.7 3,-2.2 -3,-0.3 -23,-0.5 0.702 74.5 112.6 -71.3 -24.8 25.5 13.3 11.3 42 41 A V T 3< S+ 0 0 48 -4,-1.2 -23,-0.2 1,-0.3 3,-0.1 -0.360 88.5 13.5 -51.9 128.1 24.0 13.0 7.9 43 42 A S T 3 S+ 0 0 95 -25,-2.8 -1,-0.3 1,-0.4 -2,-0.1 0.006 99.6 118.6 87.4 -20.3 25.3 9.7 6.2 44 43 A M < - 0 0 45 -3,-2.2 -26,-3.0 -4,-0.2 -1,-0.4 -0.319 61.7-125.8 -70.5 160.2 26.7 8.4 9.6 45 44 A Q E -EF 17 62C 78 17,-0.6 17,-3.3 -28,-0.3 2,-0.3 -0.848 7.6-128.7-117.0 148.4 25.2 5.1 10.9 46 45 A V E - F 0 61C 0 -30,-1.0 -31,-1.8 -2,-0.4 15,-0.2 -0.665 8.4-144.4 -93.6 144.0 23.7 4.3 14.1 47 46 A S S S+ 0 0 43 13,-2.5 2,-0.3 -2,-0.3 14,-0.1 0.541 83.3 23.4 -81.3 -16.4 24.9 1.3 16.0 48 47 A R S S- 0 0 112 12,-0.5 2,-0.2 -35,-0.1 -1,-0.1 -0.960 98.0 -82.1-145.2 161.0 21.5 0.4 17.3 49 48 A A - 0 0 53 -2,-0.3 -38,-0.0 -35,-0.1 -2,-0.0 -0.484 42.3-148.8 -65.5 126.7 17.9 1.0 16.4 50 49 A V B -D 12 0B 2 -38,-3.0 -38,-1.9 -2,-0.2 -40,-0.1 -0.876 11.0-142.4-104.9 107.9 16.8 4.4 17.6 51 50 A P > - 0 0 65 0, 0.0 3,-1.6 0, 0.0 -43,-0.3 -0.219 34.3 -81.7 -64.3 154.6 13.1 4.6 18.6 52 51 A L T 3 S+ 0 0 103 1,-0.2 -43,-0.2 -43,-0.1 3,-0.1 -0.199 116.6 22.5 -47.5 136.0 10.9 7.7 18.0 53 52 A G T 3 S+ 0 0 43 -45,-2.6 2,-0.3 1,-0.3 -1,-0.2 0.348 89.4 132.6 90.0 -16.7 11.4 10.4 20.7 54 53 A T < - 0 0 49 -3,-1.6 -46,-2.7 -47,-0.1 -1,-0.3 -0.550 58.2-124.1 -73.6 131.4 14.9 9.2 21.8 55 54 A T B -C 7 0A 24 -2,-0.3 2,-0.4 -48,-0.2 -48,-0.3 -0.556 30.4-119.6 -66.3 132.7 17.8 11.7 22.2 56 55 A L - 0 0 0 -50,-2.7 -23,-2.8 -2,-0.2 -50,-0.3 -0.663 30.9-159.0 -77.1 130.5 20.7 10.7 20.1 57 56 A M > - 0 0 51 -2,-0.4 3,-2.3 -25,-0.2 4,-0.5 -0.805 27.5-111.7-112.1 152.8 23.7 10.0 22.3 58 57 A P G > S+ 0 0 58 0, 0.0 3,-1.3 0, 0.0 6,-0.3 0.868 114.3 57.7 -50.8 -41.0 27.4 10.1 21.1 59 58 A D G 3 S+ 0 0 104 1,-0.3 3,-0.0 3,-0.0 -3,-0.0 0.312 96.5 63.0 -75.0 3.4 27.8 6.3 21.6 60 59 A M G < S+ 0 0 10 -3,-2.3 -13,-2.5 -14,-0.1 2,-0.5 0.479 90.7 72.2-103.1 -9.1 24.9 5.5 19.3 61 60 A V E X S-F 46 0C 7 -3,-1.3 3,-1.3 -4,-0.5 2,-0.3 -0.891 81.6-131.1-112.4 127.2 26.5 6.9 16.1 62 61 A K E 3 S+F 45 0C 91 -17,-3.3 -17,-0.6 -2,-0.5 -3,-0.0 -0.615 92.6 18.1 -76.8 131.5 29.4 5.0 14.6 63 62 A G T 3 S+ 0 0 71 -2,-0.3 2,-0.4 1,-0.3 -1,-0.2 0.500 89.9 144.0 89.2 6.0 32.3 7.3 13.9 64 63 A Y < + 0 0 35 -3,-1.3 2,-0.3 -6,-0.3 -1,-0.3 -0.617 12.2 156.2 -86.9 133.2 31.1 10.2 16.1 65 64 A A 0 0 71 -2,-0.4 0, 0.0 0, 0.0 0, 0.0 -0.948 360.0 360.0-146.9 133.3 33.6 12.3 18.0 66 65 A A 0 0 123 -2,-0.3 -2,-0.0 -33,-0.0 -33,-0.0 -0.752 360.0 360.0 -85.4 360.0 32.5 15.8 19.0