==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 19-MAY-99 2MSS . COMPND 2 MOLECULE: PROTEIN (MUSASHI1); . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR T.NAGATA,R.KANNO,Y.KURIHARA,S.UESUGI,T.IMAI,S.SAKAKIBARA, . 75 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5131.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 69.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 18.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 18.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 110 A K 0 0 155 0, 0.0 46,-0.3 0, 0.0 2,-0.2 0.000 360.0 360.0 360.0 158.5 62.6 2.9 7.7 2 111 A I E -A 46 0A 2 44,-1.0 44,-1.0 72,-0.2 2,-0.3 -0.566 360.0-136.3-104.9 172.6 63.5 0.2 5.2 3 112 A F E -AB 45 73A 68 70,-3.2 70,-2.4 42,-0.2 2,-0.3 -0.906 16.9-175.4-127.7 156.8 66.8 -1.4 4.2 4 113 A V E -AB 44 72A 0 40,-1.8 40,-1.6 -2,-0.3 2,-0.3 -0.998 2.5-174.8-150.0 152.9 68.4 -2.3 0.8 5 114 A G E +AB 43 71A 18 66,-1.9 66,-2.0 -2,-0.3 38,-0.2 -0.969 59.7 54.6-145.3 161.0 71.6 -4.0 -0.5 6 115 A G + 0 0 33 36,-1.0 2,-0.8 -2,-0.3 64,-0.3 0.384 58.0 166.8 95.5 -5.4 73.2 -4.7 -3.9 7 116 A L - 0 0 0 35,-1.4 -1,-0.2 64,-0.1 4,-0.1 -0.158 30.4-145.0 -45.7 91.7 73.1 -1.0 -4.8 8 117 A S - 0 0 24 -2,-0.8 3,-0.2 57,-0.2 32,-0.1 0.296 27.9 -81.1 -45.5-168.0 75.5 -1.3 -7.8 9 118 A V S S+ 0 0 62 1,-0.2 2,-9.9 24,-0.1 3,-0.0 0.171 115.1 41.8 -82.8-152.6 77.9 1.6 -8.5 10 119 A N S S+ 0 0 128 1,-0.1 -1,-0.2 -3,-0.0 2,-0.1 0.511 94.0 123.2 32.9 -14.2 77.0 4.8 -10.4 11 120 A T - 0 0 5 -2,-9.9 2,-0.3 -3,-0.2 -1,-0.1 -0.460 43.1-175.5 -72.4 142.8 73.9 4.2 -8.2 12 121 A T >> - 0 0 64 -2,-0.1 3,-5.2 1,-0.1 4,-0.7 -0.987 42.1-103.3-139.8 150.1 73.0 7.1 -5.9 13 122 A V H 3> S+ 0 0 44 -2,-0.3 4,-2.6 1,-0.3 5,-0.5 0.893 119.4 69.2 -36.8 -51.0 70.4 7.7 -3.1 14 123 A E H 3> S+ 0 0 139 1,-0.2 4,-1.2 2,-0.2 -1,-0.3 0.808 98.8 56.1 -41.5 -23.6 68.5 9.8 -5.6 15 124 A D H <> S+ 0 0 17 -3,-5.2 4,-1.5 2,-0.2 -1,-0.2 0.975 114.9 30.8 -75.8 -57.7 68.1 6.3 -7.2 16 125 A V H X>S+ 0 0 0 -4,-0.7 4,-2.5 2,-0.2 5,-0.7 0.959 119.4 54.9 -67.4 -47.9 66.5 4.5 -4.2 17 126 A K H X5S+ 0 0 95 -4,-2.6 4,-1.7 12,-0.4 -3,-0.2 0.959 114.3 40.0 -50.0 -54.8 64.8 7.6 -2.9 18 127 A H H X5S+ 0 0 76 -4,-1.2 4,-0.8 -5,-0.5 -1,-0.3 0.826 117.3 54.6 -65.6 -27.4 63.0 8.2 -6.2 19 128 A Y H ><5S+ 0 0 32 -4,-1.5 3,-1.1 2,-0.2 4,-0.5 0.996 118.3 27.5 -70.1 -70.2 62.5 4.4 -6.4 20 129 A F H >X5S+ 0 0 0 -4,-2.5 4,-4.4 1,-0.2 3,-0.8 0.734 106.2 80.2 -67.2 -16.5 60.7 3.7 -3.1 21 130 A E H 3< S+ 0 0 94 1,-0.1 2,-5.1 2,-0.1 3,-0.6 0.306 96.8 128.0 -89.3 12.3 86.2 1.1 -5.0 38 147 A N T 3 + 0 0 55 1,-0.2 -4,-1.3 -5,-0.1 3,-0.4 -0.104 26.2 124.9 -63.3 53.6 83.8 -0.8 -2.7 39 148 A R T 3 + 0 0 88 -2,-5.1 -1,-0.2 1,-0.2 -2,-0.1 0.615 42.1 91.2 -89.8 -12.0 81.2 -0.7 -5.5 40 149 A H S < S- 0 0 153 -3,-0.6 -1,-0.2 -32,-0.1 2,-0.2 0.840 106.4 -5.3 -52.6 -31.8 80.8 -4.5 -5.5 41 150 A R + 0 0 177 -3,-0.4 -7,-0.8 -33,-0.1 2,-0.1 -0.462 64.1 175.3-138.3-148.1 78.0 -4.0 -2.9 42 151 A G B -D 33 0B 7 -9,-0.2 -35,-1.4 -2,-0.2 -36,-1.0 -0.201 18.2-143.1 138.6 128.5 76.4 -1.3 -0.8 43 152 A F E -A 5 0A 95 -11,-0.9 -11,-0.5 -38,-0.2 -38,-0.3 -0.949 16.3-162.4-118.8 134.6 73.4 -1.1 1.5 44 153 A G E -A 4 0A 0 -40,-1.6 -40,-1.8 -2,-0.4 2,-0.4 -0.655 11.9-139.9-110.4 169.8 71.0 1.9 1.7 45 154 A F E +A 3 0A 70 -15,-0.4 -15,-2.6 -2,-0.2 -42,-0.2 -0.864 29.3 163.7-132.5 102.0 68.5 3.1 4.4 46 155 A V E -AC 2 29A 0 -44,-1.0 -44,-1.0 -2,-0.4 -17,-0.3 -0.310 16.8-158.3-103.2-168.8 65.2 4.5 3.1 47 156 A T E + C 0 28A 46 -19,-1.2 -19,-1.1 -46,-0.3 -20,-0.9 -0.633 15.7 169.9-176.1 114.9 61.9 5.0 5.0 48 157 A F - 0 0 5 -22,-0.3 6,-0.3 -2,-0.2 -23,-0.1 -0.924 34.3-138.7-133.3 110.5 58.3 5.4 3.9 49 158 A E S S+ 0 0 176 -2,-0.4 2,-2.8 1,-0.2 3,-0.3 0.745 87.1 99.4 -39.0 -18.1 55.5 5.4 6.6 50 159 A S >> + 0 0 53 1,-0.2 4,-1.7 2,-0.1 3,-0.8 -0.369 47.2 167.7 -72.0 72.7 53.8 3.3 3.8 51 160 A E H 3> + 0 0 117 -2,-2.8 4,-4.1 1,-0.2 5,-0.3 0.921 67.0 73.8 -54.8 -40.8 54.7 -0.1 5.5 52 161 A D H 3> S+ 0 0 134 -3,-0.3 4,-1.5 1,-0.3 -1,-0.2 0.911 102.7 40.4 -37.9 -53.4 52.2 -1.7 3.1 53 162 A I H <>>S+ 0 0 42 -3,-0.8 4,-1.4 -30,-0.2 5,-0.6 0.949 114.7 51.2 -64.3 -45.4 54.9 -1.2 0.5 54 163 A V H X5S+ 0 0 8 -4,-1.7 4,-0.7 -6,-0.3 20,-0.5 0.850 102.6 64.6 -61.1 -28.4 57.7 -2.1 2.9 55 164 A E H X5S+ 0 0 121 -4,-4.1 4,-0.5 -5,-0.2 -1,-0.2 0.962 121.5 15.6 -60.1 -50.1 55.6 -5.3 3.6 56 165 A K H ><5S+ 0 0 142 -4,-1.5 3,-2.5 -5,-0.3 -2,-0.2 0.933 125.3 53.4 -88.7 -65.5 56.0 -6.6 0.1 57 166 A V H 3<5S+ 0 0 4 -4,-1.4 -3,-0.2 1,-0.3 15,-0.2 0.786 110.0 56.7 -41.3 -23.7 58.8 -4.6 -1.4 58 167 A C H 3<