==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 19-MAY-99 2MST . COMPND 2 MOLECULE: PROTEIN (MUSASHI1); . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR T.NAGATA,R.KANNO,Y.KURIHARA,S.UESUGI,T.IMAI,S.SAKAKIBARA, . 75 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5142.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 52 69.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 10.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 110 A K 0 0 144 0, 0.0 74,-1.0 0, 0.0 46,-0.3 0.000 360.0 360.0 360.0 156.1 62.4 2.7 7.8 2 111 A I E -AB 46 74A 2 44,-1.8 44,-1.1 72,-0.2 2,-0.3 -0.657 360.0-129.2-114.8 174.8 63.5 -0.1 5.5 3 112 A F E -AB 45 73A 71 70,-2.3 70,-2.7 42,-0.2 2,-0.3 -0.862 20.5-174.0-121.9 157.7 66.9 -1.5 4.4 4 113 A V E -AB 44 72A 2 40,-1.7 40,-1.6 -2,-0.3 2,-0.3 -0.997 3.6-176.1-149.7 153.8 68.3 -2.2 1.0 5 114 A G E +AB 43 71A 10 66,-1.3 66,-1.9 -2,-0.3 38,-0.2 -0.859 54.4 71.4-141.1 176.4 71.4 -3.9 -0.6 6 115 A G - 0 0 32 36,-1.3 2,-0.5 -2,-0.3 64,-0.1 0.666 57.0-175.2 87.1 15.4 73.0 -4.4 -4.0 7 116 A L - 0 0 1 35,-0.7 -1,-0.2 25,-0.2 3,-0.1 -0.204 17.4-149.1 -47.6 97.9 73.9 -0.7 -4.4 8 117 A S - 0 0 11 -2,-0.5 2,-0.2 -3,-0.2 32,-0.0 0.213 30.2 -70.3 -57.5-168.2 75.2 -0.9 -7.9 9 118 A V S S+ 0 0 68 1,-0.2 2,-3.0 30,-0.1 -1,-0.1 -0.574 112.2 2.3 -89.1 154.5 78.0 1.4 -9.1 10 119 A N S S+ 0 0 137 28,-0.6 -1,-0.2 -2,-0.2 29,-0.1 0.093 92.4 136.1 62.3 -35.3 77.6 5.1 -9.6 11 120 A T - 0 0 2 -2,-3.0 2,-0.3 27,-0.1 -1,-0.2 -0.140 39.7-162.3 -43.6 128.7 74.0 4.6 -8.4 12 121 A T >> - 0 0 67 -3,-0.1 3,-4.3 1,-0.1 4,-0.7 -0.824 34.6 -97.5-117.7 158.6 73.3 7.5 -6.0 13 122 A V H 3> S+ 0 0 45 1,-0.3 4,-2.9 -2,-0.3 5,-0.4 0.885 120.2 69.8 -37.5 -51.8 70.6 8.0 -3.3 14 123 A E H 3> S+ 0 0 121 1,-0.2 4,-1.5 2,-0.2 -1,-0.3 0.806 98.2 55.4 -41.1 -26.1 68.5 10.0 -5.8 15 124 A D H <> S+ 0 0 29 -3,-4.3 4,-2.1 2,-0.2 -1,-0.2 0.977 115.4 32.1 -74.1 -55.8 68.2 6.6 -7.5 16 125 A V H X>S+ 0 0 1 -4,-0.7 4,-3.1 -3,-0.2 5,-0.6 0.960 117.7 57.0 -66.6 -48.1 66.7 4.7 -4.4 17 126 A K H X5S+ 0 0 78 -4,-2.9 4,-2.2 12,-0.3 -3,-0.2 0.960 115.9 34.9 -47.5 -60.8 64.9 7.8 -3.1 18 127 A H H X5S+ 0 0 74 -4,-1.5 4,-1.3 -5,-0.4 -1,-0.2 0.880 115.7 61.0 -63.9 -33.5 63.0 8.3 -6.4 19 128 A Y H <5S+ 0 0 15 -4,-2.1 3,-0.4 -5,-0.2 4,-0.3 0.985 117.9 25.1 -57.8 -60.7 62.8 4.5 -6.7 20 129 A F H >X5S+ 0 0 0 -4,-3.1 4,-2.5 1,-0.2 3,-1.0 0.712 106.3 79.4 -80.4 -16.4 60.9 3.8 -3.5 21 130 A E H 3< - 0 0 60 6,-0.1 3,-3.4 8,-0.1 5,-0.1 -0.988 49.4 -96.7-135.0 130.7 82.7 1.9 0.3 35 144 A K T 3 S- 0 0 163 -2,-0.4 0, 0.0 1,-0.3 0, 0.0 -0.119 108.8 -14.9 -42.5 125.8 85.1 4.8 1.0 36 145 A T T 3 S+ 0 0 131 1,-0.1 -1,-0.3 2,-0.1 0, 0.0 0.830 127.9 90.4 44.4 31.8 86.9 5.5 -2.3 37 146 A T X + 0 0 46 -3,-3.4 2,-2.5 2,-0.0 3,-0.7 -0.231 39.7 157.8-150.0 53.3 85.5 2.1 -3.4 38 147 A N T 3 + 0 0 73 1,-0.2 -28,-0.6 -5,-0.1 -27,-0.1 -0.211 61.0 78.7 -76.0 53.3 82.1 2.7 -5.0 39 148 A R T 3 S+ 0 0 183 -2,-2.5 -1,-0.2 -30,-0.1 3,-0.1 0.648 74.4 67.1-126.4 -45.9 82.3 -0.6 -6.9 40 149 A H S < S- 0 0 150 -3,-0.7 2,-0.1 1,-0.1 -6,-0.1 0.023 96.6 -79.2 -67.6-174.6 81.5 -3.5 -4.5 41 150 A R + 0 0 216 -8,-0.1 2,-0.2 1,-0.0 -1,-0.1 -0.483 53.4 169.0 -86.2 160.6 78.0 -4.0 -3.1 42 151 A G - 0 0 11 -2,-0.1 -36,-1.3 -3,-0.1 -35,-0.7 -0.716 27.7-109.0-148.3-160.2 76.6 -2.0 -0.2 43 152 A F E -AD 5 32A 95 -11,-1.3 -11,-1.4 -38,-0.2 2,-0.3 -0.993 19.8-159.1-147.0 137.3 73.4 -1.3 1.7 44 153 A G E -A 4 0A 0 -40,-1.6 -40,-1.7 -2,-0.3 2,-0.6 -0.798 14.6-134.4-114.7 159.6 71.2 1.8 1.9 45 154 A F E +A 3 0A 65 -2,-0.3 -15,-2.2 -42,-0.2 -42,-0.2 -0.908 29.6 173.1-115.0 109.8 68.6 2.9 4.5 46 155 A V E -AC 2 29A 0 -44,-1.1 -44,-1.8 -2,-0.6 -17,-0.3 -0.471 13.9-156.6-104.7-178.7 65.3 4.2 3.1 47 156 A T E + C 0 28A 40 -19,-1.4 -20,-1.7 -46,-0.3 -19,-0.9 -0.631 20.0 161.0-164.8 104.7 62.1 5.1 4.9 48 157 A F - 0 0 5 -22,-0.2 6,-0.2 -2,-0.2 5,-0.1 -0.914 33.6-144.3-128.4 107.8 58.5 5.3 3.7 49 158 A E S S+ 0 0 183 -2,-0.5 2,-2.3 1,-0.2 3,-0.2 0.774 76.4 107.9 -39.3 -26.6 55.7 5.2 6.4 50 159 A S > + 0 0 52 1,-0.2 4,-1.8 2,-0.1 3,-0.2 -0.252 45.3 174.8 -56.5 81.1 53.8 3.1 3.7 51 160 A E H > + 0 0 150 -2,-2.3 4,-3.1 1,-0.2 -1,-0.2 0.916 68.7 73.1 -58.3 -38.6 54.2 -0.2 5.6 52 161 A D H > S+ 0 0 134 1,-0.2 4,-1.2 2,-0.2 3,-0.5 0.928 102.7 37.9 -40.4 -63.1 51.9 -1.8 3.0 53 162 A I H >>S+ 0 0 45 1,-0.3 4,-1.7 -3,-0.2 5,-0.7 0.955 110.9 60.8 -58.0 -45.1 54.7 -1.7 0.4 54 163 A V H X5S+ 0 0 17 -4,-1.8 4,-1.4 1,-0.2 -1,-0.3 0.911 97.6 63.0 -47.4 -39.8 57.2 -2.6 3.1 55 164 A E H X5S+ 0 0 125 -4,-3.1 4,-0.6 -3,-0.5 -1,-0.2 0.959 122.0 15.8 -51.2 -56.6 55.1 -5.7 3.5 56 165 A K H >X5S+ 0 0 135 -4,-1.2 4,-2.0 -3,-0.4 3,-1.9 0.955 122.2 58.0 -84.8 -60.8 55.9 -7.0 -0.0 57 166 A V H 3<5S+ 0 0 3 -4,-1.7 15,-0.3 1,-0.3 -3,-0.2 0.791 106.0 57.8 -41.3 -25.7 58.9 -4.8 -1.1 58 167 A C H 3< S-E 68 0B 0 3,-1.8 2,-4.2 -2,-0.3 3,-0.7 -0.606 70.0 -72.2 -92.1 81.8 67.3 -0.2 -9.2 66 175 A N T 3 S- 0 0 87 -2,-1.4 -1,-0.1 1,-0.3 3,-0.0 -0.124 127.5 -1.2 64.5 -53.1 67.3 1.5 -12.6 67 176 A N T 3 S+ 0 0 99 -2,-4.2 -1,-0.3 0, 0.0 2,-0.2 0.297 123.2 71.3-147.7 7.4 69.4 -1.3 -14.0 68 177 A K B < S-E 65 0B 88 -3,-0.7 -3,-1.8 -60,-0.0 2,-0.3 -0.776 71.4-125.5-124.6 172.2 70.2 -3.7 -11.1 69 178 A M + 0 0 71 -2,-0.2 -6,-0.2 -5,-0.2 -5,-0.2 -0.425 44.9 165.3-113.1 57.7 68.3 -6.3 -9.0 70 179 A V - 0 0 5 -2,-0.3 -7,-1.4 -8,-0.2 2,-0.3 0.237 30.1-118.6 -56.9-166.8 69.1 -4.9 -5.5 71 180 A E E -B 5 0A 70 -66,-1.9 -66,-1.3 -9,-0.2 2,-0.4 -0.920 16.7-154.8-136.3 162.9 67.1 -6.1 -2.4 72 181 A C E +B 4 0A 0 -12,-0.9 -68,-0.2 -2,-0.3 2,-0.2 -0.979 13.1 174.8-144.1 130.8 64.8 -4.5 0.2 73 182 A K E -B 3 0A 68 -70,-2.7 -70,-2.3 -2,-0.4 2,-0.2 -0.773 32.2-101.8-126.7 173.4 63.9 -5.5 3.7 74 183 A K E B 2 0A 130 -72,-0.2 -72,-0.2 -2,-0.2 -23,-0.0 -0.632 360.0 360.0 -95.6 156.2 61.9 -4.0 6.6 75 184 A A 0 0 83 -74,-1.0 -30,-0.0 -2,-0.2 0, 0.0 -0.988 360.0 360.0-141.8 360.0 63.4 -2.3 9.6