==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HORMONE/GROWTH FACTOR 22-OCT-02 1N27 . COMPND 2 MOLECULE: HEPATOMA-DERIVED GROWTH FACTOR, RELATED PROTEIN . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR N.NAMEKI,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE, . 96 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6966.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 64.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 20.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 14 14.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 13.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 113.5 -10.3 5.8 -21.4 2 2 A S - 0 0 115 2,-0.1 0, 0.0 0, 0.0 0, 0.0 -0.914 360.0-138.3-144.9 95.6 -10.9 2.1 -21.2 3 3 A S + 0 0 135 -2,-0.4 2,-0.1 2,-0.0 3,-0.0 -0.220 60.0 89.7 -57.5 149.5 -14.2 0.5 -19.9 4 4 A G S S- 0 0 65 1,-0.0 -2,-0.1 2,-0.0 0, 0.0 -0.093 71.7-124.0 123.7 127.3 -13.8 -2.6 -17.7 5 5 A S - 0 0 125 -2,-0.1 3,-0.2 2,-0.1 -1,-0.0 0.869 35.9-170.5 -65.7 -33.2 -13.5 -2.6 -13.9 6 6 A S + 0 0 84 1,-0.2 2,-1.7 3,-0.0 -1,-0.1 0.805 10.0 175.4 44.7 41.1 -10.2 -4.6 -14.4 7 7 A G + 0 0 72 2,-0.1 -1,-0.2 0, 0.0 2,-0.2 -0.627 43.4 100.6 -76.4 81.6 -10.0 -5.4 -10.6 8 8 A E S S- 0 0 103 -2,-1.7 34,-0.0 -3,-0.2 0, 0.0 -0.692 78.4-113.8-169.6 109.2 -6.9 -7.6 -11.0 9 9 A Y - 0 0 42 -2,-0.2 2,-0.3 1,-0.1 -2,-0.1 -0.146 28.3-161.2 -75.6 155.3 -3.7 -5.9 -10.1 10 10 A K > - 0 0 102 19,-0.1 3,-2.0 1,-0.1 19,-0.2 -0.859 34.4 -79.2-132.6 153.9 -0.8 -5.1 -12.4 11 11 A A T 3 S+ 0 0 59 -2,-0.3 19,-0.2 1,-0.3 3,-0.1 -0.255 115.0 29.4 -57.7 140.1 2.9 -4.2 -11.9 12 12 A G T 3 S+ 0 0 62 17,-2.5 -1,-0.3 1,-0.4 18,-0.1 0.197 91.7 117.4 89.5 -12.0 3.5 -0.6 -10.9 13 13 A D < - 0 0 87 -3,-2.0 16,-2.6 17,-0.1 -1,-0.4 -0.381 59.5-133.0 -71.3 166.6 0.2 -0.3 -9.0 14 14 A L E +A 28 0A 11 14,-0.2 51,-2.2 -3,-0.1 52,-0.3 -0.918 30.2 164.1-124.4 148.8 0.3 0.4 -5.3 15 15 A V E -AB 27 64A 0 12,-2.7 12,-2.3 -2,-0.3 2,-0.4 -0.900 38.9-106.7-148.7 170.5 -1.7 -1.5 -2.6 16 16 A F E -AB 26 63A 0 47,-2.1 47,-1.6 -2,-0.3 2,-0.5 -0.961 31.7-156.7-103.7 138.2 -2.0 -2.2 1.1 17 17 A A E -AB 25 62A 0 8,-2.5 8,-2.8 -2,-0.4 2,-0.7 -0.964 1.5-156.0-116.6 120.7 -1.0 -5.7 2.1 18 18 A K E -A 24 0A 78 43,-1.3 2,-0.2 -2,-0.5 6,-0.2 -0.883 10.1-174.3-105.0 106.5 -2.5 -7.2 5.3 19 19 A M > - 0 0 52 -2,-0.7 2,-1.2 4,-0.7 3,-0.6 -0.654 50.1 -77.7 -87.9 158.1 -0.4 -10.0 6.9 20 20 A K T 3 S- 0 0 226 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.0 -0.378 116.4 -6.7 -64.5 93.5 -1.9 -11.7 10.0 21 21 A G T 3 S+ 0 0 78 -2,-1.2 -1,-0.3 1,-0.6 -3,-0.0 0.063 110.7 104.1 105.1 -18.8 -1.4 -9.3 12.8 22 22 A Y S < S- 0 0 117 -3,-0.6 -1,-0.6 1,-0.2 3,-0.1 -0.440 79.2-101.3 -72.6 162.1 0.8 -6.7 10.9 23 23 A P - 0 0 16 0, 0.0 2,-1.3 0, 0.0 -4,-0.7 -0.072 54.1 -70.0 -61.8 178.7 -1.0 -3.5 9.9 24 24 A H E S-A 18 0A 49 -6,-0.2 -6,-0.2 48,-0.1 38,-0.0 -0.715 71.2-148.4 -65.0 92.3 -2.3 -2.7 6.4 25 25 A W E -A 17 0A 10 -8,-2.8 -8,-2.5 -2,-1.3 2,-0.4 -0.532 12.9-110.6 -76.4 141.1 1.4 -2.5 5.2 26 26 A P E +A 16 0A 0 0, 0.0 23,-1.2 0, 0.0 2,-0.3 -0.616 54.7 161.0 -68.0 121.1 2.4 -0.2 2.4 27 27 A A E -AC 15 48A 0 -12,-2.3 -12,-2.7 -2,-0.4 2,-0.3 -0.946 29.4-138.9-141.2 163.5 3.2 -2.4 -0.6 28 28 A R E -AC 14 47A 77 19,-2.6 19,-2.2 -2,-0.3 2,-0.6 -0.886 22.4-117.3-119.9 152.3 3.6 -2.3 -4.4 29 29 A I E - C 0 46A 2 -16,-2.6 -17,-2.5 -2,-0.3 17,-0.2 -0.819 42.1-176.9 -78.5 121.9 2.7 -4.6 -7.2 30 30 A D - 0 0 62 15,-2.2 2,-0.2 -2,-0.6 -17,-0.1 -0.446 20.4-117.1-102.5-174.4 6.0 -5.6 -8.7 31 31 A E - 0 0 131 -2,-0.2 -1,-0.1 -20,-0.1 -19,-0.0 -0.440 30.0 -99.1-107.7-171.5 6.6 -7.8 -11.8 32 32 A L - 0 0 73 -2,-0.2 2,-0.0 4,-0.0 6,-0.0 -0.948 30.5-125.0-113.7 136.8 8.3 -11.1 -12.1 33 33 A P > - 0 0 77 0, 0.0 2,-2.0 0, 0.0 3,-0.8 -0.311 35.2 -98.6 -68.5 164.2 11.9 -11.6 -13.3 34 34 A E T 3 S+ 0 0 194 1,-0.2 -2,-0.0 -2,-0.0 0, 0.0 -0.336 115.0 20.2 -78.5 51.4 12.8 -13.9 -16.3 35 35 A G T 3 S+ 0 0 75 -2,-2.0 -1,-0.2 2,-0.1 3,-0.1 0.532 92.8 102.6 161.9 10.1 13.8 -16.7 -13.9 36 36 A A S < S- 0 0 69 -3,-0.8 2,-0.1 1,-0.2 -4,-0.0 -0.002 77.8 -38.6 -97.9-159.7 12.5 -16.6 -10.2 37 37 A V - 0 0 99 1,-0.1 -1,-0.2 -2,-0.0 -2,-0.1 -0.359 52.5-129.4 -62.1 142.0 9.8 -18.4 -8.3 38 38 A K - 0 0 185 -3,-0.1 -1,-0.1 -2,-0.1 3,-0.1 -0.861 25.2-152.7 -87.7 113.4 6.4 -19.1 -10.1 39 39 A P - 0 0 32 0, 0.0 2,-0.2 0, 0.0 3,-0.1 -0.270 28.6 -89.1 -70.2 170.1 3.5 -17.9 -7.8 40 40 A P > - 0 0 74 0, 0.0 3,-1.8 0, 0.0 2,-0.0 -0.580 55.8 -83.1 -77.5 153.9 0.0 -19.5 -8.0 41 41 A A T 3 S+ 0 0 91 1,-0.3 3,-0.1 -2,-0.2 17,-0.0 -0.348 116.5 26.1 -64.0 136.4 -2.5 -18.1 -10.4 42 42 A N T 3 S+ 0 0 128 1,-0.4 -1,-0.3 -3,-0.1 2,-0.1 -0.196 101.3 105.2 97.9 -26.6 -4.4 -15.1 -9.2 43 43 A K < - 0 0 80 -3,-1.8 -1,-0.4 15,-0.2 15,-0.2 -0.333 55.5-149.1 -83.2 167.0 -1.5 -14.1 -6.8 44 44 A Y E - D 0 57A 30 13,-2.1 2,-1.3 -3,-0.1 13,-1.1 -0.932 27.3-106.8-130.3 149.4 1.0 -11.2 -7.2 45 45 A P E - D 0 56A 25 0, 0.0 -15,-2.2 0, 0.0 2,-0.6 -0.694 44.5-165.9 -70.7 92.3 4.6 -10.5 -6.2 46 46 A I E -CD 29 55A 0 9,-1.8 9,-1.8 -2,-1.3 2,-0.6 -0.807 6.1-156.4 -84.5 122.9 3.8 -8.0 -3.5 47 47 A F E -CD 28 54A 40 -19,-2.2 -19,-2.6 -2,-0.6 2,-0.8 -0.934 11.3-141.1-102.1 117.4 6.9 -6.0 -2.4 48 48 A F E >>> -CD 27 53A 2 5,-2.9 4,-1.9 -2,-0.6 3,-0.9 -0.754 20.5-137.2 -84.1 105.2 6.5 -4.7 1.1 49 49 A F T 345S+ 0 0 5 -23,-1.2 2,-0.3 -2,-0.8 35,-0.3 -0.166 82.0 24.7 -60.7 156.8 8.0 -1.2 1.1 50 50 A G T 345S+ 0 0 8 33,-0.2 -1,-0.2 1,-0.2 33,-0.1 0.076 130.6 43.6 73.2 -23.4 10.3 -0.1 4.1 51 51 A T T <45S- 0 0 52 -3,-0.9 -2,-0.2 -2,-0.3 -1,-0.2 0.531 95.6-144.9-113.6 -18.5 11.1 -3.7 5.0 52 52 A H T <5 + 0 0 93 -4,-1.9 -3,-0.2 1,-0.2 2,-0.1 0.625 44.8 153.0 61.9 18.4 11.7 -4.7 1.3 53 53 A E E < -D 48 0A 98 -5,-0.7 -5,-2.9 -4,-0.1 2,-0.4 -0.356 35.2-142.0 -73.2 160.2 10.2 -8.2 2.0 54 54 A T E +D 47 0A 114 -7,-0.2 2,-0.3 -2,-0.1 -7,-0.2 -0.976 27.9 154.1-125.7 131.0 8.5 -10.2 -0.7 55 55 A A E -D 46 0A 35 -9,-1.8 -9,-1.8 -2,-0.4 2,-0.6 -0.958 40.0-113.8-143.8 170.2 5.4 -12.5 -0.3 56 56 A F E +D 45 0A 73 -2,-0.3 2,-0.3 -11,-0.2 -13,-0.1 -0.925 39.2 165.1-107.2 118.1 2.6 -13.8 -2.5 57 57 A L E -D 44 0A 21 -13,-1.1 -13,-2.1 -2,-0.6 -2,-0.0 -0.907 28.6-131.1-124.5 154.2 -0.9 -12.6 -1.7 58 58 A G > - 0 0 11 -2,-0.3 3,-1.8 -15,-0.2 4,-0.3 -0.641 37.6 -94.7-100.5 167.1 -4.1 -12.8 -3.8 59 59 A P G > S+ 0 0 44 0, 0.0 3,-1.7 0, 0.0 -16,-0.1 0.773 118.5 62.4 -61.6 -32.8 -6.4 -9.8 -4.4 60 60 A K G 3 S+ 0 0 195 1,-0.3 -3,-0.0 3,-0.0 0, 0.0 0.784 103.5 49.7 -63.2 -28.8 -8.9 -10.6 -1.6 61 61 A D G < S+ 0 0 82 -3,-1.8 -43,-1.3 2,-0.0 -1,-0.3 0.481 109.8 70.0 -82.8 -1.2 -6.1 -10.1 1.0 62 62 A L E < -B 17 0A 7 -3,-1.7 -45,-0.2 -4,-0.3 -38,-0.0 -0.706 63.9-152.1-126.9 160.7 -5.1 -6.8 -0.7 63 63 A F E -B 16 0A 47 -47,-1.6 -47,-2.1 -2,-0.2 2,-0.2 -0.999 30.2-104.0-140.4 136.4 -6.6 -3.2 -1.1 64 64 A P E >> -B 15 0A 52 0, 0.0 4,-1.5 0, 0.0 3,-0.6 -0.423 29.0-136.5 -64.6 128.7 -6.2 -0.6 -3.9 65 65 A Y H >> S+ 0 0 22 -51,-2.2 4,-1.5 1,-0.2 3,-1.0 0.934 99.1 50.7 -51.2 -59.5 -3.8 2.2 -2.7 66 66 A K H 34 S+ 0 0 164 -52,-0.3 4,-0.2 1,-0.3 -1,-0.2 0.752 111.3 49.3 -61.3 -23.5 -5.8 5.2 -4.0 67 67 A E H <4 S+ 0 0 123 -3,-0.6 -1,-0.3 1,-0.2 -2,-0.2 0.829 127.6 24.6 -79.5 -29.7 -9.0 3.9 -2.3 68 68 A Y H S+ 0 0 47 -4,-1.5 4,-3.2 -3,-1.0 5,-1.1 0.268 88.9 112.9-114.5 6.2 -7.3 3.3 1.1 69 69 A K H X5S+ 0 0 62 -4,-1.5 4,-0.6 1,-0.3 -3,-0.1 0.855 92.7 26.0 -57.1 -44.5 -4.4 5.8 0.8 70 70 A D H 45S+ 0 0 102 -4,-0.2 -1,-0.3 2,-0.1 -2,-0.1 0.772 122.6 56.2 -89.9 -28.0 -5.6 8.1 3.5 71 71 A K H 45S+ 0 0 123 -4,-0.1 -2,-0.2 1,-0.1 -1,-0.1 0.855 130.6 8.7 -68.5 -44.1 -7.5 5.4 5.4 72 72 A F H <5S+ 0 0 39 -4,-3.2 2,-2.2 -7,-0.2 -3,-0.2 0.612 107.8 87.9-114.2 -27.2 -4.6 3.0 5.9 73 73 A G << + 0 0 11 -5,-1.1 2,-0.3 -4,-0.6 -1,-0.1 -0.454 68.7 120.3 -79.1 63.5 -1.6 5.1 4.7 74 74 A K S S- 0 0 112 -2,-2.2 2,-2.1 -3,-0.1 3,-0.0 -0.936 79.2 -76.6-142.7 157.6 -1.1 6.6 8.2 75 75 A S + 0 0 97 -2,-0.3 7,-0.1 1,-0.2 -2,-0.1 -0.207 54.0 158.1 -73.4 71.4 1.7 6.6 10.7 76 76 A N - 0 0 69 -2,-2.1 -1,-0.2 -4,-0.2 6,-0.1 0.567 33.4-154.0 -75.0 -11.1 1.6 3.1 12.2 77 77 A K + 0 0 172 1,-0.2 -1,-0.1 3,-0.1 3,-0.1 0.640 38.3 149.8 53.7 29.1 5.3 3.4 13.4 78 78 A R S S- 0 0 162 1,-0.2 -1,-0.2 2,-0.0 -2,-0.0 0.311 72.0 -91.4 -71.7 11.3 5.9 -0.4 13.4 79 79 A K S S+ 0 0 180 1,-0.0 2,-1.7 0, 0.0 -1,-0.2 0.353 118.7 29.1 62.0 143.4 9.7 0.1 12.5 80 80 A G S >> S+ 0 0 13 1,-0.1 4,-2.7 -3,-0.1 3,-0.6 -0.141 100.9 93.2 71.6 -40.9 10.2 0.1 8.7 81 81 A F H 3> S+ 0 0 0 -2,-1.7 4,-1.6 1,-0.3 -5,-0.2 0.678 81.4 48.2 -59.3 -30.4 6.6 1.4 8.4 82 82 A N H 3> S+ 0 0 88 2,-0.2 4,-1.0 3,-0.1 -1,-0.3 0.849 113.1 49.3 -81.5 -33.2 7.5 5.1 8.3 83 83 A E H X> S+ 0 0 120 -3,-0.6 4,-3.0 2,-0.2 3,-1.1 0.978 113.9 45.6 -59.2 -58.2 10.1 4.4 5.6 84 84 A G H 3X S+ 0 0 0 -4,-2.7 4,-2.4 -35,-0.3 5,-0.2 0.814 108.8 54.8 -64.7 -33.7 7.6 2.4 3.6 85 85 A L H 3X S+ 0 0 23 -4,-1.6 4,-0.9 -5,-0.2 -1,-0.3 0.771 115.7 40.5 -66.7 -29.6 4.9 5.0 3.9 86 86 A W H X S+ 0 0 1 -4,-2.4 4,-1.4 2,-0.2 3,-0.7 0.904 112.1 48.2 -73.5 -45.0 5.2 4.3 -1.5 89 89 A E H >< S+ 0 0 105 -4,-0.9 3,-0.9 1,-0.3 -2,-0.2 0.980 118.2 42.1 -55.5 -55.9 4.1 7.9 -1.8 90 90 A N T 3< S+ 0 0 92 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.437 109.9 60.4 -75.6 -3.5 7.4 8.7 -3.5 91 91 A S T <4 S+ 0 0 59 -3,-0.7 -1,-0.3 -5,-0.2 -2,-0.2 0.780 97.8 68.6 -83.7 -36.8 7.2 5.5 -5.6 92 92 A G S << S- 0 0 18 -4,-1.4 2,-0.5 -3,-0.9 -79,-0.1 -0.306 103.7 -74.9 -89.6 170.3 4.0 6.4 -7.4 93 93 A P + 0 0 116 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.503 67.4 160.1 -62.8 112.0 2.9 8.9 -10.0 94 94 A S + 0 0 80 -2,-0.5 -5,-0.0 -4,-0.1 -4,-0.0 -0.944 57.0 10.9-137.4 149.0 2.9 12.1 -7.8 95 95 A S 0 0 138 -2,-0.3 0, 0.0 1,-0.2 0, 0.0 0.393 360.0 360.0 57.7 2.3 3.0 15.8 -8.9 96 96 A G 0 0 117 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.199 360.0 360.0-131.3 360.0 2.5 14.7 -12.6