==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUN-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 24-MAY-10 3N4Y . COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L30E; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS CELER; . AUTHOR C.H.CHAN,K.B.WONG . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5347.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 72.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 11.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 33.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 106 0, 0.0 2,-1.6 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 123.5 2.4 -0.5 -16.0 2 2 A D > - 0 0 94 1,-0.2 4,-3.6 2,-0.1 5,-0.3 -0.558 360.0-175.3 -73.3 88.3 0.2 2.2 -17.6 3 3 A F H > S+ 0 0 20 -2,-1.6 4,-3.6 1,-0.2 5,-0.3 0.942 77.7 46.5 -51.7 -61.7 -0.4 4.2 -14.4 4 4 A A H > S+ 0 0 41 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.915 119.1 42.3 -50.0 -50.5 -2.8 6.8 -15.9 5 5 A F H > S+ 0 0 102 2,-0.2 4,-3.0 1,-0.2 -1,-0.2 0.947 116.6 45.9 -62.0 -52.5 -4.8 4.1 -17.7 6 6 A E H X S+ 0 0 25 -4,-3.6 4,-2.7 1,-0.2 87,-0.3 0.870 110.5 54.8 -63.5 -36.5 -4.8 1.6 -14.9 7 7 A L H X S+ 0 0 1 -4,-3.6 4,-1.7 -5,-0.3 -1,-0.2 0.961 112.6 42.5 -59.1 -51.5 -5.7 4.3 -12.4 8 8 A R H X S+ 0 0 151 -4,-2.2 4,-3.1 -5,-0.3 5,-0.2 0.898 112.0 54.5 -60.5 -45.6 -8.8 5.2 -14.5 9 9 A K H X S+ 0 0 60 -4,-3.0 4,-2.0 1,-0.2 81,-0.3 0.930 110.1 46.4 -53.4 -49.1 -9.6 1.6 -15.1 10 10 A A H X S+ 0 0 0 -4,-2.7 4,-1.5 1,-0.2 -1,-0.2 0.810 112.7 51.8 -64.6 -30.7 -9.7 1.0 -11.4 11 11 A Q H < S+ 0 0 64 -4,-1.7 -2,-0.2 -5,-0.2 -1,-0.2 0.918 116.9 38.3 -67.2 -43.9 -11.8 4.1 -11.1 12 12 A D H < S+ 0 0 120 -4,-3.1 -2,-0.2 1,-0.1 -3,-0.2 0.636 133.2 23.0 -84.1 -17.8 -14.3 2.9 -13.7 13 13 A T H < S+ 0 0 57 -4,-2.0 -3,-0.2 -5,-0.2 -2,-0.2 0.487 126.0 24.2-127.5 -5.3 -14.3 -0.8 -12.6 14 14 A G S < S- 0 0 25 -4,-1.5 2,-0.3 -5,-0.3 -3,-0.1 -0.059 87.9 -75.8-130.0-132.9 -13.2 -0.9 -9.0 15 15 A K E +A 87 0A 99 72,-3.6 71,-2.5 -2,-0.1 72,-2.4 -0.892 37.5 171.4-151.1 112.5 -13.1 1.3 -5.9 16 16 A I E -A 85 0A 23 -2,-0.3 2,-0.5 69,-0.2 69,-0.2 -0.964 17.0-153.5-120.7 141.7 -10.6 4.2 -5.2 17 17 A V E -A 84 0A 25 67,-2.8 67,-2.6 -2,-0.4 2,-0.3 -0.966 14.8-147.1-118.7 127.4 -10.9 6.6 -2.3 18 18 A M E +A 83 0A 30 -2,-0.5 4,-0.3 65,-0.2 65,-0.2 -0.644 48.7 50.1-101.6 150.2 -9.4 10.1 -2.6 19 19 A G S > S- 0 0 15 63,-2.3 4,-1.7 -2,-0.3 5,-0.1 -0.035 77.2-100.1 108.6 149.3 -7.9 12.3 -0.1 20 20 A A H > S+ 0 0 14 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.879 120.0 54.7 -67.0 -38.5 -5.2 12.0 2.6 21 21 A R H > S+ 0 0 213 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.965 111.1 41.9 -59.5 -56.0 -7.8 11.7 5.3 22 22 A K H > S+ 0 0 17 -4,-0.3 4,-2.4 2,-0.2 -1,-0.2 0.854 113.9 53.0 -61.7 -37.8 -9.6 8.7 3.7 23 23 A S H X S+ 0 0 2 -4,-1.7 4,-1.9 2,-0.2 -1,-0.2 0.921 110.6 45.7 -67.0 -46.0 -6.3 7.0 2.7 24 24 A I H X S+ 0 0 36 -4,-2.5 4,-2.5 1,-0.2 5,-0.3 0.920 113.0 53.7 -58.9 -41.2 -5.0 7.2 6.2 25 25 A Q H X S+ 0 0 123 -4,-2.4 4,-1.2 -5,-0.2 6,-0.2 0.886 111.1 43.0 -60.5 -42.5 -8.4 5.9 7.4 26 26 A Y H <>S+ 0 0 49 -4,-2.4 6,-1.7 2,-0.2 5,-0.9 0.744 112.3 56.0 -77.7 -24.3 -8.3 2.9 5.0 27 27 A A H ><5S+ 0 0 5 -4,-1.9 3,-1.4 3,-0.2 -2,-0.2 0.968 110.1 41.9 -67.2 -56.1 -4.7 2.3 6.0 28 28 A K H 3<5S+ 0 0 64 -4,-2.5 -2,-0.2 1,-0.3 -1,-0.2 0.767 119.2 45.8 -65.3 -27.8 -5.3 2.0 9.7 29 29 A M T 3<5S- 0 0 116 -4,-1.2 -1,-0.3 -5,-0.3 -2,-0.2 0.385 107.0-134.2 -92.1 0.2 -8.5 0.0 9.1 30 30 A G T < 5 + 0 0 42 -3,-1.4 -3,-0.2 1,-0.1 -4,-0.1 0.547 69.8 125.2 61.7 9.4 -6.5 -2.0 6.6 31 31 A G < + 0 0 22 -5,-0.9 2,-0.3 -6,-0.2 -4,-0.2 0.632 49.3 88.5 -74.0 -13.8 -9.3 -1.8 4.1 32 32 A A - 0 0 5 -6,-1.7 54,-0.3 -9,-0.1 3,-0.1 -0.684 58.2-162.3 -91.7 139.3 -7.0 -0.4 1.4 33 33 A K S S- 0 0 110 52,-3.7 2,-0.3 -2,-0.3 53,-0.2 0.676 77.2 -6.3 -89.8 -21.1 -5.0 -2.6 -1.0 34 34 A L E -B 85 0A 0 51,-0.8 51,-3.0 24,-0.1 2,-0.4 -0.949 63.7-140.8-167.1 151.6 -2.5 0.0 -2.1 35 35 A I E -Bc 84 60A 5 24,-2.4 26,-2.5 -2,-0.3 2,-0.4 -0.975 8.5-158.1-123.9 141.1 -2.0 3.7 -1.5 36 36 A I E -Bc 83 61A 0 47,-3.2 47,-2.4 -2,-0.4 2,-0.4 -0.957 10.4-169.2-116.6 136.4 -0.8 6.3 -4.1 37 37 A V E -Bc 82 62A 1 24,-1.7 26,-1.5 -2,-0.4 45,-0.2 -0.986 25.0-114.8-130.7 133.0 0.8 9.5 -3.0 38 38 A A E > - c 0 63A 0 43,-2.4 3,-3.7 -2,-0.4 28,-0.1 -0.462 27.0-121.4 -65.3 128.1 1.6 12.6 -5.0 39 39 A R T 3 S+ 0 0 69 24,-2.2 27,-0.2 26,-0.8 -1,-0.1 0.832 115.2 39.5 -28.3 -51.1 5.4 13.4 -5.3 40 40 A N T 3 S+ 0 0 83 25,-0.7 -1,-0.3 2,-0.0 26,-0.1 0.070 79.4 146.3-100.1 23.3 4.6 16.8 -3.7 41 41 A A S < S- 0 0 4 -3,-3.7 5,-0.1 40,-0.2 -4,-0.0 -0.353 71.1 -81.7 -55.0 142.7 2.1 15.7 -1.1 42 42 A R >> - 0 0 141 1,-0.1 4,-3.6 3,-0.1 3,-0.9 -0.292 41.2-128.1 -61.8 124.3 2.5 18.0 1.9 43 43 A P H 3> S+ 0 0 103 0, 0.0 4,-1.6 0, 0.0 -1,-0.1 0.712 106.7 47.6 -47.2 -36.3 5.4 16.5 3.9 44 44 A D H 3> S+ 0 0 85 2,-0.2 4,-1.2 1,-0.2 5,-0.1 0.901 119.4 40.0 -74.6 -39.9 3.6 16.4 7.2 45 45 A I H <> S+ 0 0 46 -3,-0.9 4,-1.9 2,-0.2 5,-0.2 0.897 115.8 51.9 -70.3 -42.5 0.5 14.8 5.6 46 46 A K H X S+ 0 0 36 -4,-3.6 4,-1.9 1,-0.2 -2,-0.2 0.825 106.9 53.3 -63.4 -34.4 2.7 12.6 3.4 47 47 A E H X S+ 0 0 124 -4,-1.6 4,-1.6 -5,-0.3 -1,-0.2 0.883 108.5 48.9 -72.3 -37.3 4.7 11.3 6.4 48 48 A D H X S+ 0 0 81 -4,-1.2 4,-2.7 2,-0.2 5,-0.2 0.903 112.0 48.1 -67.4 -45.7 1.6 10.3 8.3 49 49 A I H X S+ 0 0 4 -4,-1.9 4,-2.6 1,-0.2 5,-0.2 0.926 112.1 50.4 -55.7 -47.6 0.1 8.4 5.3 50 50 A E H X S+ 0 0 69 -4,-1.9 4,-1.6 1,-0.2 -2,-0.2 0.814 111.5 49.4 -66.6 -30.8 3.5 6.7 4.9 51 51 A Y H X S+ 0 0 110 -4,-1.6 4,-2.7 2,-0.2 -1,-0.2 0.931 112.4 44.4 -71.9 -48.1 3.5 5.7 8.5 52 52 A Y H X S+ 0 0 75 -4,-2.7 4,-1.9 2,-0.2 6,-0.2 0.894 112.4 52.5 -68.1 -38.8 0.0 4.3 8.7 53 53 A A H <>S+ 0 0 1 -4,-2.6 5,-2.6 -5,-0.2 4,-0.3 0.947 112.7 45.3 -57.8 -49.3 0.5 2.4 5.4 54 54 A R H ><5S+ 0 0 215 -4,-1.6 3,-1.2 1,-0.2 -2,-0.2 0.889 108.8 56.1 -60.2 -43.5 3.8 0.9 6.8 55 55 A L H 3<5S+ 0 0 105 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.887 115.2 39.3 -54.7 -39.3 2.1 0.1 10.2 56 56 A S T 3<5S- 0 0 45 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.333 111.0-118.4 -97.1 6.3 -0.5 -1.9 8.2 57 57 A G T < 5 + 0 0 67 -3,-1.2 -3,-0.2 -4,-0.3 -4,-0.1 0.723 62.8 151.4 63.8 19.9 1.9 -3.4 5.7 58 58 A I < - 0 0 17 -5,-2.6 -1,-0.2 -6,-0.2 -24,-0.1 -0.703 46.8-117.7 -83.8 133.5 0.0 -1.7 2.9 59 59 A P - 0 0 51 0, 0.0 -24,-2.4 0, 0.0 2,-0.4 -0.396 24.0-158.1 -71.5 144.9 2.1 -0.8 -0.2 60 60 A V E -c 35 0A 53 -26,-0.2 2,-0.5 37,-0.1 -24,-0.2 -0.990 4.6-167.3-126.1 127.0 2.6 2.9 -1.2 61 61 A Y E -c 36 0A 71 -26,-2.5 -24,-1.7 -2,-0.4 2,-0.8 -0.953 19.1-135.0-112.6 123.9 3.6 3.9 -4.7 62 62 A E E -c 37 0A 72 -2,-0.5 2,-0.4 -26,-0.2 -24,-0.2 -0.682 14.3-138.2 -82.9 110.4 4.7 7.5 -5.2 63 63 A F E -c 38 0A 22 -26,-1.5 2,-2.5 -2,-0.8 -24,-2.2 -0.531 15.9-133.4 -59.7 120.2 3.1 9.1 -8.3 64 64 A E S S+ 0 0 140 -2,-0.4 2,-0.3 -26,-0.1 -1,-0.1 -0.380 77.7 70.7 -78.3 63.6 5.9 11.0 -10.0 65 65 A G S S- 0 0 3 -2,-2.5 -26,-0.8 0, 0.0 -25,-0.7 -0.956 86.3 -80.4-165.9 174.3 3.6 14.0 -10.4 66 66 A T > - 0 0 43 -2,-0.3 4,-2.1 -27,-0.2 5,-0.1 -0.382 38.3-112.9 -86.7 164.8 1.9 16.9 -8.6 67 67 A S H > S+ 0 0 18 2,-0.2 13,-2.5 1,-0.2 4,-1.8 0.716 121.0 53.3 -70.6 -22.2 -1.4 16.6 -6.8 68 68 A V H > S+ 0 0 82 11,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.875 110.0 48.8 -76.0 -36.6 -3.0 18.9 -9.4 69 69 A E H > S+ 0 0 96 2,-0.2 4,-1.5 1,-0.2 -2,-0.2 0.854 112.8 47.0 -65.1 -37.5 -1.7 16.4 -12.0 70 70 A L H X S+ 0 0 0 -4,-2.1 4,-1.9 10,-0.3 -2,-0.2 0.884 111.5 51.5 -70.5 -40.2 -3.1 13.5 -9.9 71 71 A G H <>S+ 0 0 0 -4,-1.8 5,-3.2 9,-0.2 -2,-0.2 0.861 107.7 51.8 -62.9 -38.6 -6.4 15.2 -9.5 72 72 A T H ><5S+ 0 0 103 -4,-2.0 3,-1.4 3,-0.2 -1,-0.2 0.886 106.1 55.8 -68.1 -39.2 -6.7 15.9 -13.2 73 73 A L H 3<5S+ 0 0 53 -4,-1.5 -2,-0.2 1,-0.3 -1,-0.2 0.942 106.5 48.8 -51.9 -53.0 -6.1 12.2 -13.9 74 74 A L T 3<5S- 0 0 5 -4,-1.9 -1,-0.3 1,-0.1 -2,-0.2 0.388 119.4-114.9 -71.0 6.1 -9.1 11.2 -11.6 75 75 A G T < 5 + 0 0 63 -3,-1.4 -3,-0.2 1,-0.2 -2,-0.1 0.829 65.4 152.9 62.5 33.4 -11.1 13.8 -13.6 76 76 A R < - 0 0 110 -5,-3.2 -1,-0.2 2,-0.2 -2,-0.1 -0.775 53.3-138.2-100.0 141.2 -11.4 15.9 -10.4 77 77 A P S S+ 0 0 131 0, 0.0 2,-0.3 0, 0.0 -5,-0.1 0.096 88.3 45.6 -74.9 19.7 -11.9 19.7 -10.3 78 78 A H S S- 0 0 90 -7,-0.2 -2,-0.2 -11,-0.1 -3,-0.0 -0.967 97.0 -72.9-157.9 164.6 -9.4 19.8 -7.4 79 79 A T - 0 0 77 -2,-0.3 2,-0.4 -8,-0.1 -11,-0.2 -0.298 31.7-161.2 -64.5 147.6 -6.1 18.5 -6.1 80 80 A V + 0 0 4 -13,-2.5 -10,-0.3 1,-0.1 -9,-0.2 -0.971 12.3 175.5-128.0 116.2 -5.7 14.9 -5.0 81 81 A S + 0 0 28 -2,-0.4 -43,-2.4 1,-0.3 2,-0.3 0.637 68.7 1.5 -98.9 -16.4 -2.6 14.4 -2.8 82 82 A A E - B 0 37A 0 -45,-0.2 -63,-2.3 -15,-0.1 2,-0.3 -0.972 59.9-169.4-161.1 160.3 -3.1 10.7 -2.0 83 83 A L E -AB 18 36A 0 -47,-2.4 -47,-3.2 -2,-0.3 2,-0.5 -0.993 13.5-142.1-151.8 149.7 -5.6 7.9 -2.8 84 84 A A E -AB 17 35A 0 -67,-2.6 -67,-2.8 -2,-0.3 2,-0.8 -0.962 14.9-137.5-117.2 132.6 -6.2 4.4 -1.5 85 85 A V E +AB 16 34A 0 -51,-3.0 -52,-3.7 -2,-0.5 -51,-0.8 -0.802 28.6 167.1 -85.7 113.5 -7.2 1.6 -3.8 86 86 A V E S+ 0 0 22 -71,-2.5 -70,-0.2 -2,-0.8 -1,-0.2 0.846 76.7 16.1 -88.4 -45.1 -10.0 -0.4 -2.1 87 87 A D E -A 15 0A 78 -72,-2.4 -72,-3.6 -77,-0.1 -1,-0.3 -0.975 60.6-162.1-131.6 119.1 -11.0 -2.4 -5.2 88 88 A P > - 0 0 23 0, 0.0 3,-1.6 0, 0.0 2,-0.3 0.737 26.6-168.0 -71.8 -19.3 -8.7 -2.7 -8.2 89 89 A G T 3 - 0 0 28 1,-0.2 -75,-0.2 -76,-0.1 -79,-0.1 -0.552 63.9 -24.6 68.4-125.6 -11.6 -3.8 -10.4 90 90 A E T 3 S+ 0 0 147 -2,-0.3 -1,-0.2 -81,-0.3 -80,-0.1 0.346 114.9 104.2 -98.0 0.6 -10.3 -5.1 -13.7 91 91 A S S < S- 0 0 13 -3,-1.6 3,-0.3 -85,-0.1 -85,-0.1 -0.302 73.9-128.6 -90.6 168.0 -7.1 -3.1 -13.6 92 92 A R > + 0 0 143 1,-0.2 3,-1.5 -90,-0.1 4,-0.3 -0.044 67.5 124.2 -96.3 27.6 -3.4 -3.9 -12.9 93 93 A I G > + 0 0 0 1,-0.3 3,-1.2 -87,-0.3 -1,-0.2 0.782 67.2 59.9 -66.1 -25.4 -3.1 -1.0 -10.4 94 94 A L G > S+ 0 0 74 -3,-0.3 3,-2.5 1,-0.3 -1,-0.3 0.724 86.3 76.4 -73.6 -20.6 -1.9 -3.4 -7.7 95 95 A A G < S+ 0 0 40 -3,-1.5 -1,-0.3 1,-0.3 -2,-0.2 0.688 80.3 71.7 -62.0 -17.6 1.1 -4.3 -9.9 96 96 A L G < 0 0 28 -3,-1.2 -1,-0.3 -4,-0.3 -2,-0.2 0.560 360.0 360.0 -70.3 -9.3 2.4 -0.9 -8.7 97 97 A G < 0 0 74 -3,-2.5 -1,-0.2 -38,-0.1 -2,-0.2 0.551 360.0 360.0 -85.3 360.0 2.9 -2.6 -5.4