==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-NOV-02 1N6Z . COMPND 2 MOLECULE: HYPOTHETICAL 12.3 KDA PROTEIN IN ZDS2-URA5 . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR A.PINEDA-LUCENA,C.H.ARROWSMITH,NORTHEAST STRUCTURAL . 105 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7567.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 68 64.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 5.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 14.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 11.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 26.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 125 0, 0.0 44,-0.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -54.6 3.8 17.7 -1.0 2 2 A S + 0 0 101 3,-0.1 4,-0.1 42,-0.1 43,-0.1 0.707 360.0 79.6-117.2 -61.6 4.2 21.4 -1.9 3 3 A K S S- 0 0 118 1,-0.2 2,-2.2 2,-0.1 0, 0.0 -0.055 94.7-102.1 -49.2 154.2 2.9 21.9 -5.4 4 4 A S S S+ 0 0 108 1,-0.1 2,-0.2 -3,-0.0 -1,-0.2 -0.437 96.3 89.7 -81.4 64.8 -0.9 22.3 -5.6 5 5 A N + 0 0 88 -2,-2.2 2,-0.3 2,-0.0 42,-0.2 -0.693 48.5 167.6-164.4 103.3 -1.3 18.7 -6.9 6 6 A T - 0 0 80 -2,-0.2 2,-0.2 40,-0.1 40,-0.1 -0.826 11.9-161.9-119.3 158.6 -1.9 15.7 -4.7 7 7 A Y E -A 43 0A 48 36,-1.1 36,-0.7 38,-0.3 2,-0.3 -0.569 12.7-121.9-125.1-171.7 -2.9 12.2 -5.4 8 8 A R E -A 42 0A 106 72,-0.4 74,-1.2 34,-0.3 2,-0.4 -0.969 10.7-146.3-138.2 152.3 -4.3 9.1 -3.5 9 9 A M E -Ab 41 82A 3 32,-3.4 32,-2.3 -2,-0.3 2,-0.5 -0.972 7.2-152.5-123.8 134.8 -3.2 5.6 -3.0 10 10 A L E -Ab 40 83A 34 72,-1.4 74,-3.3 -2,-0.4 2,-0.5 -0.901 7.8-152.1-108.3 131.4 -5.4 2.5 -2.7 11 11 A V E -Ab 39 84A 0 28,-1.7 27,-3.1 -2,-0.5 28,-0.6 -0.899 9.5-165.9-105.8 126.2 -4.2 -0.5 -0.7 12 12 A L E +Ab 37 85A 17 72,-2.7 74,-2.2 -2,-0.5 2,-0.4 -0.943 8.3 178.2-114.8 131.5 -5.6 -3.9 -1.7 13 13 A L E - b 0 86A 23 23,-1.1 2,-0.5 -2,-0.5 23,-0.5 -0.994 26.3-127.2-134.3 139.2 -5.2 -7.0 0.6 14 14 A E - 0 0 45 72,-0.7 2,-0.5 -2,-0.4 20,-0.1 -0.748 23.7-165.7 -88.7 124.6 -6.5 -10.5 0.1 15 15 A D - 0 0 91 -2,-0.5 2,-0.3 18,-0.3 18,-0.1 -0.951 9.6-144.5-114.7 125.4 -8.5 -11.9 3.0 16 16 A D - 0 0 70 -2,-0.5 2,-0.8 14,-0.1 14,-0.1 -0.682 4.7-146.2 -89.1 140.2 -9.2 -15.6 3.2 17 17 A T - 0 0 59 -2,-0.3 2,-1.5 11,-0.1 13,-0.2 -0.774 10.4-164.6-109.0 85.6 -12.6 -16.7 4.6 18 18 A K - 0 0 168 -2,-0.8 2,-0.4 11,-0.2 7,-0.1 -0.556 17.7-178.3 -72.5 92.4 -11.9 -19.9 6.5 19 19 A I - 0 0 60 -2,-1.5 5,-0.2 5,-0.5 10,-0.2 -0.762 21.2-127.2 -97.1 140.8 -15.4 -21.2 6.8 20 20 A N >> - 0 0 89 -2,-0.4 3,-1.6 1,-0.1 4,-1.0 0.312 56.5 -63.1 -63.8-158.5 -16.2 -24.4 8.6 21 21 A K T 34 S+ 0 0 165 1,-0.3 -1,-0.1 3,-0.2 4,-0.1 0.588 120.4 91.5 -68.0 -9.3 -18.3 -27.2 7.1 22 22 A E T 34 S- 0 0 172 2,-0.1 -1,-0.3 1,-0.1 -2,-0.1 0.662 118.2 -11.8 -59.4 -15.3 -21.0 -24.6 7.0 23 23 A D T <4 S- 0 0 112 -3,-1.6 2,-0.2 -4,-0.1 -2,-0.2 0.315 133.8 -23.4-145.0 -71.3 -19.7 -23.9 3.6 24 24 A E < + 0 0 85 -4,-1.0 -5,-0.5 -5,-0.2 5,-0.2 -0.691 51.1 159.2-161.2 100.2 -16.4 -25.4 2.7 25 25 A K S S+ 0 0 119 -2,-0.2 -4,-0.1 1,-0.1 -5,-0.1 0.423 81.2 60.3 -99.6 -3.7 -13.8 -26.5 5.3 26 26 A F S S+ 0 0 192 -6,-0.1 2,-0.2 2,-0.1 -1,-0.1 0.763 93.1 73.2 -92.0 -31.5 -12.2 -28.8 2.8 27 27 A L S S- 0 0 49 1,-0.1 2,-3.1 3,-0.0 -3,-0.1 -0.572 102.6 -97.7 -85.5 148.7 -11.2 -26.1 0.3 28 28 A K - 0 0 183 -2,-0.2 -11,-0.1 1,-0.2 -1,-0.1 -0.373 63.5 -96.0 -65.3 74.4 -8.4 -23.7 1.0 29 29 A G - 0 0 13 -2,-3.1 -11,-0.2 -5,-0.2 -1,-0.2 0.569 51.3-160.4 5.2 97.7 -10.9 -21.1 2.2 30 30 A K - 0 0 160 -13,-0.2 2,-0.2 -14,-0.1 -1,-0.1 -0.903 8.3-136.0-105.4 120.6 -11.2 -19.1 -1.1 31 31 A P - 0 0 24 0, 0.0 3,-0.1 0, 0.0 -15,-0.1 -0.476 16.8-122.4 -75.0 143.1 -12.5 -15.5 -0.7 32 32 A G S S+ 0 0 81 1,-0.2 2,-0.4 -2,-0.2 -16,-0.0 0.945 95.8 14.2 -45.3 -67.4 -15.2 -14.4 -3.2 33 33 A K S S- 0 0 144 -18,-0.1 -18,-0.3 -3,-0.0 2,-0.3 -0.940 75.0-168.0-117.7 137.8 -13.1 -11.4 -4.5 34 34 A M + 0 0 115 -2,-0.4 -20,-0.1 1,-0.2 -18,-0.0 -0.813 60.4 33.4-121.7 162.3 -9.5 -10.9 -3.9 35 35 A H S S+ 0 0 73 -2,-0.3 2,-0.4 1,-0.2 -1,-0.2 0.985 78.7 156.5 58.0 63.7 -7.1 -8.0 -4.4 36 36 A E - 0 0 97 -23,-0.5 -23,-1.1 -3,-0.2 -1,-0.2 -0.927 49.2 -96.6-123.0 147.1 -9.6 -5.3 -3.6 37 37 A F E -A 12 0A 126 -2,-0.4 -25,-0.3 -25,-0.2 3,-0.1 -0.364 31.9-177.0 -61.8 132.8 -9.1 -1.7 -2.4 38 38 A V E - 0 0 81 -27,-3.1 2,-0.3 1,-0.4 -1,-0.2 0.790 65.1 -25.9 -98.3 -39.7 -9.5 -1.4 1.3 39 39 A D E -A 11 0A 71 -28,-0.6 -28,-1.7 2,-0.0 -1,-0.4 -0.968 56.7-122.2-168.7 162.3 -9.1 2.4 1.6 40 40 A E E -A 10 0A 80 -2,-0.3 2,-0.4 -30,-0.2 -30,-0.2 -0.947 21.9-171.8-120.3 138.4 -7.5 5.4 -0.2 41 41 A L E -A 9 0A 20 -32,-2.3 -32,-3.4 -2,-0.4 2,-0.6 -0.963 25.6-120.3-129.6 145.8 -5.0 7.8 1.3 42 42 A I E -A 8 0A 81 -2,-0.4 -34,-0.3 -34,-0.3 -2,-0.0 -0.763 30.7-161.4 -88.4 119.4 -3.6 11.0 -0.1 43 43 A L E -A 7 0A 11 -36,-0.7 2,-1.8 -2,-0.6 -36,-1.1 -0.733 30.7-114.4-101.4 150.9 0.2 10.9 -0.4 44 44 A P + 0 0 13 0, 0.0 2,-0.5 0, 0.0 -42,-0.1 -0.138 69.2 141.1 -75.0 42.9 2.5 13.9 -0.7 45 45 A F - 0 0 2 -2,-1.8 -38,-0.3 -38,-0.1 2,-0.3 -0.774 30.2-172.2 -92.9 128.7 3.3 12.8 -4.2 46 46 A N > - 0 0 0 -2,-0.5 3,-0.9 3,-0.2 7,-0.1 -0.771 34.4-125.1-116.5 162.1 3.7 15.4 -6.9 47 47 A V T 3 S+ 0 0 74 -2,-0.3 3,-0.4 1,-0.3 -1,-0.1 0.726 115.3 49.7 -75.6 -22.9 4.1 15.2 -10.7 48 48 A D T 3 S+ 0 0 97 1,-0.2 -1,-0.3 2,-0.1 -45,-0.1 -0.242 102.0 65.2-108.5 40.9 7.2 17.2 -10.4 49 49 A E <> + 0 0 26 -3,-0.9 4,-2.7 2,-0.1 -1,-0.2 -0.057 54.4 121.1-151.6 35.5 8.7 15.1 -7.6 50 50 A L H > S+ 0 0 43 -3,-0.4 4,-3.2 2,-0.2 5,-0.2 0.901 82.1 46.8 -68.6 -42.7 9.3 11.8 -9.2 51 51 A D H > S+ 0 0 144 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.939 119.8 38.9 -63.6 -49.0 13.0 11.9 -8.4 52 52 A E H > S+ 0 0 108 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.837 118.4 49.8 -69.5 -34.3 12.3 13.0 -4.9 53 53 A L H X S+ 0 0 6 -4,-2.7 4,-3.4 2,-0.2 -2,-0.2 0.872 112.7 46.5 -71.0 -38.7 9.4 10.6 -4.7 54 54 A N H X S+ 0 0 94 -4,-3.2 4,-2.3 2,-0.2 -2,-0.2 0.869 114.4 48.2 -70.0 -38.2 11.5 7.8 -6.1 55 55 A T H X S+ 0 0 88 -4,-2.3 4,-1.8 2,-0.2 -2,-0.2 0.921 119.4 37.6 -67.4 -46.1 14.3 8.7 -3.6 56 56 A W H X S+ 0 0 44 -4,-2.6 4,-3.9 2,-0.2 5,-0.3 0.940 119.3 48.4 -69.9 -48.9 11.9 8.8 -0.7 57 57 A F H X S+ 0 0 40 -4,-3.4 4,-2.6 1,-0.2 -2,-0.2 0.850 110.0 53.5 -58.7 -36.8 9.9 5.9 -1.9 58 58 A D H X S+ 0 0 107 -4,-2.3 4,-1.1 2,-0.2 -1,-0.2 0.907 114.6 40.4 -64.6 -43.2 13.1 4.0 -2.5 59 59 A K H >X S+ 0 0 122 -4,-1.8 4,-2.5 2,-0.2 3,-0.5 0.935 118.9 45.5 -70.2 -48.5 14.1 4.6 1.1 60 60 A F H 3X S+ 0 0 37 -4,-3.9 4,-3.2 1,-0.2 5,-0.3 0.819 104.4 64.4 -63.7 -32.1 10.7 4.1 2.5 61 61 A D H 3X S+ 0 0 39 -4,-2.6 4,-1.4 -5,-0.3 -1,-0.2 0.879 110.1 38.0 -58.2 -39.5 10.4 1.0 0.3 62 62 A A H < S+ 0 0 51 -4,-1.4 3,-1.1 -5,-0.3 -2,-0.2 0.797 101.0 64.6 -77.5 -30.5 10.1 -3.7 3.3 66 66 A I T 3< S+ 0 0 129 -4,-3.5 -2,-0.2 1,-0.3 -1,-0.2 0.946 105.9 41.7 -55.6 -52.8 12.2 -4.1 6.4 67 67 A P T 3 S+ 0 0 46 0, 0.0 2,-0.3 0, 0.0 -1,-0.3 0.431 105.5 92.0 -75.0 1.4 9.2 -4.7 8.6 68 68 A N < - 0 0 11 -3,-1.1 2,-0.1 -6,-0.2 22,-0.1 -0.761 57.3-167.1 -99.5 144.3 7.9 -6.8 5.7 69 69 A E + 0 0 173 -2,-0.3 2,-0.3 20,-0.1 -3,-0.1 -0.516 65.3 19.7-128.6 63.3 8.4 -10.5 5.5 70 70 A G S S- 0 0 36 -5,-0.2 2,-0.3 -2,-0.1 -2,-0.1 -0.965 96.9 -40.7 171.3-159.4 7.5 -11.4 2.0 71 71 A H - 0 0 171 -2,-0.3 16,-0.6 2,-0.0 2,-0.4 -0.702 45.5-166.7 -97.8 149.8 6.9 -10.0 -1.5 72 72 A I E -C 86 0A 36 -2,-0.3 2,-0.4 14,-0.1 14,-0.2 -0.998 4.5-159.7-138.7 139.9 5.2 -6.8 -2.2 73 73 A K E +C 85 0A 89 12,-2.2 12,-2.7 -2,-0.4 2,-0.3 -0.959 12.9 177.1-122.4 138.8 3.8 -5.3 -5.5 74 74 A Y E -C 84 0A 99 -2,-0.4 2,-0.4 10,-0.2 10,-0.2 -0.956 16.0-154.8-139.0 156.3 3.1 -1.7 -6.2 75 75 A E E -C 83 0A 112 8,-2.7 8,-3.1 -2,-0.3 2,-0.5 -0.967 9.3-178.5-137.6 118.2 2.0 0.4 -9.1 76 76 A I E -C 82 0A 60 -2,-0.4 2,-0.6 6,-0.2 6,-0.2 -0.954 8.6-164.1-120.6 112.0 2.7 4.1 -9.6 77 77 A S E >> -C 81 0A 46 4,-4.4 3,-3.8 -2,-0.5 4,-2.2 -0.857 18.7-145.0 -99.3 120.4 1.3 5.8 -12.7 78 78 A S T 34 S+ 0 0 81 -2,-0.6 -1,-0.1 1,-0.3 4,-0.1 0.778 98.5 76.7 -50.1 -28.0 2.8 9.1 -13.6 79 79 A D T 34 S- 0 0 144 2,-0.1 -1,-0.3 1,-0.1 -32,-0.1 0.726 129.7 -91.0 -55.9 -20.8 -0.7 10.0 -14.6 80 80 A G T <4 S+ 0 0 8 -3,-3.8 2,-0.4 1,-0.3 -72,-0.4 0.740 87.2 127.7 110.0 42.3 -1.2 10.4 -10.9 81 81 A L E < + C 0 77A 81 -4,-2.2 -4,-4.4 -74,-0.1 2,-0.5 -0.975 29.6 179.9-133.3 117.9 -2.4 6.9 -9.8 82 82 A I E +bC 9 76A 5 -74,-1.2 -72,-1.4 -2,-0.4 2,-0.4 -0.975 2.5 179.4-121.6 129.6 -0.7 5.0 -7.0 83 83 A V E -bC 10 75A 25 -8,-3.1 -8,-2.7 -2,-0.5 2,-0.5 -0.984 13.9-153.1-131.2 140.8 -1.8 1.5 -5.9 84 84 A L E -bC 11 74A 11 -74,-3.3 -72,-2.7 -2,-0.4 2,-0.5 -0.963 8.2-167.6-117.5 125.5 -0.4 -0.7 -3.2 85 85 A M E +bC 12 73A 19 -12,-2.7 -12,-2.2 -2,-0.5 2,-0.4 -0.953 11.8 170.1-117.1 117.8 -0.8 -4.5 -3.5 86 86 A L E -bC 13 72A 0 -74,-2.2 -72,-0.7 -2,-0.5 -14,-0.1 -0.987 26.7-129.2-128.8 136.5 0.0 -6.6 -0.4 87 87 A D > - 0 0 33 -16,-0.6 3,-0.6 -2,-0.4 7,-0.2 -0.213 26.0-112.4 -75.0 170.1 -0.6 -10.3 0.0 88 88 A K G > S+ 0 0 80 1,-0.2 3,-2.3 2,-0.2 4,-0.2 0.872 117.9 61.2 -70.9 -38.6 -2.4 -11.8 3.1 89 89 A E G 3 S+ 0 0 131 1,-0.3 -1,-0.2 2,-0.1 3,-0.1 0.634 113.1 39.5 -62.5 -13.0 0.8 -13.4 4.2 90 90 A I G X> S+ 0 0 0 -3,-0.6 3,-1.2 1,-0.1 4,-1.0 -0.095 72.6 131.2-126.1 31.1 2.1 -9.9 4.4 91 91 A E H <> + 0 0 69 -3,-2.3 4,-1.5 1,-0.3 5,-0.2 0.755 64.8 72.8 -55.2 -25.0 -1.0 -8.3 5.8 92 92 A E H 3> S+ 0 0 72 1,-0.3 4,-2.2 2,-0.2 3,-0.4 0.927 94.4 49.0 -55.7 -49.3 1.4 -6.7 8.3 93 93 A V H <> S+ 0 0 0 -3,-1.2 4,-3.4 1,-0.2 -1,-0.3 0.833 102.0 66.3 -59.7 -33.2 2.8 -4.4 5.7 94 94 A V H X S+ 0 0 15 -4,-1.0 4,-2.2 1,-0.2 -1,-0.2 0.929 108.6 36.5 -53.2 -50.0 -0.8 -3.6 4.8 95 95 A E H X S+ 0 0 118 -4,-1.5 4,-2.3 -3,-0.4 -1,-0.2 0.834 117.4 52.6 -71.9 -34.2 -1.2 -1.9 8.2 96 96 A K H X S+ 0 0 82 -4,-2.2 4,-1.6 -5,-0.2 -2,-0.2 0.794 110.8 48.7 -70.6 -29.2 2.3 -0.6 8.1 97 97 A V H X S+ 0 0 3 -4,-3.4 4,-4.0 2,-0.2 5,-0.3 0.911 110.1 49.6 -75.4 -45.6 1.5 0.9 4.7 98 98 A K H X S+ 0 0 60 -4,-2.2 4,-2.5 -5,-0.2 -2,-0.2 0.923 116.8 41.9 -58.4 -46.8 -1.7 2.5 5.8 99 99 A K H X S+ 0 0 99 -4,-2.3 4,-1.4 2,-0.2 -1,-0.2 0.851 116.1 51.6 -68.3 -35.4 0.1 4.0 8.8 100 100 A F H X S+ 0 0 20 -4,-1.6 4,-2.2 2,-0.2 5,-0.2 0.951 112.4 43.2 -65.6 -52.3 3.0 4.8 6.6 101 101 A V H X S+ 0 0 1 -4,-4.0 4,-2.3 1,-0.2 3,-0.2 0.945 120.0 42.6 -58.4 -51.3 0.9 6.6 4.0 102 102 A E H < S+ 0 0 103 -4,-2.5 -1,-0.2 -5,-0.3 -2,-0.2 0.745 110.3 60.4 -66.8 -24.0 -1.1 8.4 6.6 103 103 A E H < S+ 0 0 140 -4,-1.4 -1,-0.2 -6,-0.2 -2,-0.2 0.881 110.3 38.7 -70.1 -40.3 2.2 9.0 8.4 104 104 A N H < 0 0 60 -4,-2.2 -2,-0.2 -3,-0.2 -1,-0.2 0.815 360.0 360.0 -78.1 -32.9 3.6 10.9 5.5 105 105 A N < 0 0 104 -4,-2.3 -2,-0.2 -5,-0.2 -1,-0.2 0.924 360.0 360.0 -40.4 360.0 0.2 12.6 4.9