==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 15-DEC-02 1NFJ . COMPND 2 MOLECULE: CONSERVED HYPOTHETICAL PROTEIN AF1956; . SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; . AUTHOR K.ZHAO,X.CHAI,R.MARMORSTEIN . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5935.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 73 83.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 5.7 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 25.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 27.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A E 0 0 169 0, 0.0 2,-0.4 0, 0.0 28,-0.1 0.000 360.0 360.0 360.0 135.1 -3.9 15.2 9.2 2 4 A H E -a 29 0A 71 26,-0.6 28,-2.7 16,-0.0 2,-0.4 -0.746 360.0-164.1 -95.8 130.1 -0.6 16.5 8.2 3 5 A V E -a 30 0A 54 -2,-0.4 2,-0.5 26,-0.2 28,-0.2 -0.973 10.2-165.4-124.9 136.6 2.2 17.0 10.8 4 6 A V E -a 31 0A 11 26,-2.9 28,-2.5 -2,-0.4 2,-0.5 -0.959 12.6-152.9-120.8 111.8 5.4 19.0 10.6 5 7 A Y E -a 32 0A 154 -2,-0.5 2,-0.5 26,-0.2 28,-0.2 -0.750 11.6-145.4 -87.4 124.8 8.0 18.3 13.3 6 8 A V + 0 0 8 26,-3.3 28,-0.5 -2,-0.5 35,-0.2 -0.792 29.9 157.1 -95.1 123.3 10.3 21.2 14.0 7 9 A G - 0 0 21 -2,-0.5 33,-0.1 3,-0.1 -1,-0.1 0.029 58.4 -62.0-114.9-137.2 13.9 20.5 15.0 8 10 A N S S+ 0 0 152 -2,-0.1 3,-0.1 32,-0.0 -2,-0.1 0.410 91.3 110.6 -99.6 0.8 17.2 22.3 14.8 9 11 A K S S- 0 0 119 1,-0.2 5,-0.1 2,-0.1 -2,-0.0 -0.187 87.7 -66.9 -68.9 166.3 17.4 22.8 11.1 10 12 A P >> - 0 0 85 0, 0.0 3,-1.1 0, 0.0 4,-0.8 -0.211 46.9-117.5 -53.7 149.7 17.0 26.3 9.7 11 13 A V H >> S+ 0 0 26 1,-0.2 4,-1.7 2,-0.2 3,-0.7 0.853 110.1 65.1 -57.8 -36.9 13.6 27.8 10.2 12 14 A M H 3> S+ 0 0 63 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.772 92.2 61.9 -59.5 -29.1 13.0 28.0 6.4 13 15 A N H <> S+ 0 0 68 -3,-1.1 4,-1.9 1,-0.2 -1,-0.2 0.912 109.3 41.5 -63.6 -40.8 13.1 24.2 6.0 14 16 A Y H <>S+ 0 0 56 -4,-1.9 5,-1.4 1,-0.2 3,-1.1 0.932 112.4 50.8 -58.6 -48.7 1.4 20.6 2.7 22 24 A L H ><5S+ 0 0 5 -4,-2.1 3,-0.5 1,-0.3 -1,-0.2 0.823 115.7 43.7 -59.6 -30.9 -1.0 23.6 2.6 23 25 A N H 3<5S+ 0 0 108 -4,-2.1 -1,-0.3 1,-0.2 -2,-0.2 0.504 107.3 62.5 -91.0 -6.2 -0.3 23.8 -1.2 24 26 A E T <<5S- 0 0 146 -3,-1.1 -1,-0.2 -4,-0.8 -2,-0.2 0.029 131.6 -70.5-109.4 26.2 -0.6 20.1 -1.7 25 27 A G T < 5S+ 0 0 63 -3,-0.5 2,-0.5 1,-0.3 -3,-0.2 0.694 89.5 130.7 98.4 20.3 -4.2 19.6 -0.6 26 28 A A < - 0 0 4 -5,-1.4 -1,-0.3 -6,-0.2 3,-0.1 -0.926 34.7-172.8-111.1 127.5 -4.2 20.1 3.2 27 29 A D S S+ 0 0 118 -2,-0.5 60,-2.6 1,-0.2 2,-0.3 0.665 79.8 26.7 -87.2 -18.5 -6.7 22.5 4.8 28 30 A E E - B 0 86A 76 58,-0.2 -26,-0.6 -7,-0.1 2,-0.3 -0.984 63.4-170.3-143.0 150.9 -4.9 22.2 8.1 29 31 A V E -aB 2 85A 0 56,-2.1 56,-3.1 -2,-0.3 2,-0.5 -0.996 14.2-143.5-144.4 137.2 -1.4 21.5 9.3 30 32 A V E -aB 3 84A 1 -28,-2.7 -26,-2.9 -2,-0.3 2,-0.5 -0.902 8.5-157.0-106.8 123.8 -0.0 20.8 12.8 31 33 A I E -aB 4 83A 0 52,-3.2 52,-3.1 -2,-0.5 2,-0.3 -0.860 19.2-178.5 -97.9 128.3 3.4 22.1 13.8 32 34 A K E +aB 5 82A 45 -28,-2.5 -26,-3.3 -2,-0.5 2,-0.3 -0.935 10.4 152.2-127.9 153.6 5.0 20.1 16.7 33 35 A A E - B 0 81A 8 48,-1.6 48,-2.2 -2,-0.3 2,-0.3 -0.970 24.1-141.4-169.1 163.6 8.2 20.5 18.6 34 36 A R E > - B 0 80A 108 -28,-0.5 3,-1.8 -2,-0.3 46,-0.3 -0.924 59.5 -13.9-134.9 159.3 9.8 19.8 21.9 35 37 A G T > S- 0 0 33 44,-2.6 3,-2.1 -2,-0.3 4,-0.3 -0.146 128.9 -5.9 52.8-139.3 12.2 21.5 24.2 36 38 A R T >> S+ 0 0 238 1,-0.3 4,-0.6 2,-0.2 3,-0.6 0.626 125.3 72.4 -62.3 -16.0 14.1 24.4 22.8 37 39 A A H <> S+ 0 0 18 -3,-1.8 4,-2.4 1,-0.2 -1,-0.3 0.690 77.1 81.4 -73.9 -16.9 12.7 23.7 19.3 38 40 A I H <> S+ 0 0 37 -3,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.923 87.9 54.0 -54.1 -45.3 9.4 25.0 20.6 39 41 A S H <> S+ 0 0 86 -3,-0.6 4,-1.8 -4,-0.3 -1,-0.2 0.918 109.0 47.9 -55.2 -46.0 10.7 28.6 20.0 40 42 A R H X S+ 0 0 84 -4,-0.6 4,-2.7 1,-0.2 -1,-0.2 0.891 106.0 58.5 -64.0 -37.6 11.4 27.6 16.4 41 43 A A H X S+ 0 0 0 -4,-2.4 4,-2.2 1,-0.2 -1,-0.2 0.907 106.5 47.4 -57.7 -44.9 8.0 26.0 16.0 42 44 A V H X S+ 0 0 57 -4,-2.0 4,-2.4 2,-0.2 -1,-0.2 0.884 110.0 53.5 -64.3 -38.6 6.3 29.4 16.9 43 45 A D H X S+ 0 0 80 -4,-1.8 4,-3.0 2,-0.2 5,-0.3 0.928 107.9 51.1 -60.9 -44.5 8.6 31.2 14.4 44 46 A V H X S+ 0 0 0 -4,-2.7 4,-2.5 1,-0.2 -2,-0.2 0.951 110.7 47.7 -57.7 -50.4 7.5 28.7 11.7 45 47 A A H X S+ 0 0 2 -4,-2.2 4,-2.0 1,-0.2 -1,-0.2 0.882 114.5 46.9 -58.2 -41.6 3.9 29.4 12.4 46 48 A E H X S+ 0 0 70 -4,-2.4 4,-1.8 2,-0.2 5,-0.3 0.904 111.8 48.9 -68.9 -42.8 4.4 33.2 12.4 47 49 A I H X>S+ 0 0 38 -4,-3.0 4,-1.9 2,-0.2 5,-1.1 0.923 112.6 49.3 -63.3 -44.9 6.5 33.2 9.2 48 50 A V H X>S+ 0 0 0 -4,-2.5 5,-2.9 -5,-0.3 4,-0.7 0.949 119.1 35.8 -58.8 -52.2 3.9 31.1 7.4 49 51 A R H <5S+ 0 0 83 -4,-2.0 6,-0.3 -5,-0.2 -1,-0.2 0.646 121.8 46.7 -79.3 -17.1 0.9 33.2 8.4 50 52 A N H <5S+ 0 0 98 -4,-1.8 -3,-0.2 -5,-0.2 -2,-0.2 0.923 129.6 5.1 -92.4 -53.6 2.6 36.5 8.3 51 53 A R H <5S+ 0 0 165 -4,-1.9 -3,-0.2 -5,-0.3 -2,-0.1 0.580 133.0 37.4-112.1 -9.4 4.6 36.8 5.0 52 54 A F T < < - 0 0 41 -5,-2.9 3,-2.2 -6,-0.3 -2,-0.1 -0.381 64.9-175.8-142.4 63.0 0.1 32.9 3.6 54 56 A P T 3 S+ 0 0 101 0, 0.0 -4,-0.1 0, 0.0 3,-0.1 -0.304 76.2 49.8 -56.2 147.5 -1.9 35.6 5.2 55 57 A G T 3 S+ 0 0 47 1,-0.5 2,-0.2 -6,-0.3 -6,-0.1 -0.089 80.1 115.0 111.4 -34.5 -5.4 34.3 5.8 56 58 A V < - 0 0 9 -3,-2.2 -1,-0.5 31,-0.2 2,-0.3 -0.530 55.9-153.5 -68.7 133.1 -4.1 31.1 7.4 57 59 A K E -C 86 0A 140 29,-3.3 29,-3.0 -2,-0.2 2,-0.9 -0.752 21.2-112.9-113.7 159.1 -5.2 31.2 11.1 58 60 A V E -C 85 0A 47 -2,-0.3 27,-0.2 27,-0.2 3,-0.1 -0.814 34.6-178.4 -89.0 107.5 -4.0 29.6 14.3 59 61 A K E - 0 0 122 25,-2.7 2,-0.3 -2,-0.9 -1,-0.2 0.830 60.0 -16.1 -77.4 -37.9 -6.7 27.1 15.1 60 62 A E E -C 84 0A 114 24,-1.0 24,-2.9 2,-0.0 2,-0.4 -0.957 50.5-154.3-167.5 149.0 -5.4 25.8 18.4 61 63 A I E -C 83 0A 99 -2,-0.3 2,-0.4 22,-0.2 22,-0.2 -0.999 15.8-176.8-130.7 132.8 -2.2 25.6 20.5 62 64 A K E -C 82 0A 86 20,-2.4 20,-2.0 -2,-0.4 2,-0.3 -0.996 5.1-168.0-133.1 134.0 -1.6 22.9 23.0 63 65 A I E +C 81 0A 127 -2,-0.4 2,-0.3 18,-0.2 18,-0.2 -0.888 19.4 148.1-117.9 153.6 1.4 22.5 25.4 64 66 A D E -C 80 0A 87 16,-1.8 16,-2.1 -2,-0.3 2,-0.4 -0.868 40.7-102.3-160.2-169.0 2.2 19.4 27.3 65 67 A T E -C 79 0A 79 -2,-0.3 2,-0.4 14,-0.2 14,-0.2 -1.000 23.6-157.8-135.3 132.0 5.1 17.4 28.8 66 68 A E E -C 78 0A 67 12,-3.2 12,-2.4 -2,-0.4 2,-0.7 -0.934 14.0-138.1-113.1 134.3 6.5 14.2 27.4 67 69 A E E -C 77 0A 106 -2,-0.4 10,-0.2 10,-0.2 3,-0.1 -0.829 27.5-144.5 -90.7 115.1 8.5 11.7 29.5 68 70 A L - 0 0 41 8,-3.1 3,-0.1 -2,-0.7 8,-0.0 -0.365 29.5 -81.7 -79.6 161.2 11.4 10.6 27.3 69 71 A E - 0 0 154 6,-0.1 7,-0.4 1,-0.1 -1,-0.1 -0.324 62.4 -94.2 -59.5 141.5 12.9 7.1 27.3 70 72 A S - 0 0 62 5,-0.2 2,-0.4 -3,-0.1 5,-0.3 -0.196 38.5-165.8 -61.2 150.2 15.2 6.6 30.3 71 73 A E B > S-D 74 0B 139 3,-1.9 3,-0.7 -3,-0.1 -3,-0.0 -0.991 74.4 -8.8-139.3 127.2 19.0 7.3 29.8 72 74 A Q T 3 S- 0 0 210 -2,-0.4 3,-0.1 1,-0.2 -1,-0.1 0.849 135.1 -50.9 51.7 35.4 21.5 6.1 32.4 73 75 A G T 3 S+ 0 0 73 1,-0.1 2,-0.3 0, 0.0 -1,-0.2 0.768 117.7 100.5 77.9 28.4 18.5 5.3 34.6 74 76 A R B < -D 71 0B 193 -3,-0.7 -3,-1.9 -5,-0.1 2,-0.7 -0.959 58.0-147.2-148.3 124.9 16.6 8.5 34.5 75 77 A R - 0 0 149 -2,-0.3 2,-0.2 -5,-0.3 -5,-0.2 -0.833 25.2-151.1 -92.4 114.1 13.5 9.4 32.4 76 78 A S - 0 0 46 -2,-0.7 -8,-3.1 -7,-0.4 2,-0.4 -0.593 5.2-132.8 -89.0 147.4 13.7 13.1 31.6 77 79 A N E - C 0 67A 111 -2,-0.2 2,-0.4 -10,-0.2 -10,-0.2 -0.815 22.9-174.5 -99.4 137.4 10.7 15.4 31.0 78 80 A V E - C 0 66A 30 -12,-2.4 -12,-3.2 -2,-0.4 2,-0.2 -0.977 23.2-119.9-132.3 143.5 10.6 17.7 28.0 79 81 A S E - C 0 65A 68 -2,-0.4 -44,-2.6 -14,-0.2 2,-0.3 -0.491 28.9-165.3 -80.2 152.1 8.0 20.3 27.1 80 82 A T E -BC 34 64A 22 -16,-2.1 -16,-1.8 -46,-0.3 2,-0.3 -0.959 8.2-163.5-136.8 154.3 6.0 20.0 23.8 81 83 A I E -BC 33 63A 15 -48,-2.2 -48,-1.6 -2,-0.3 2,-0.4 -0.982 2.2-164.7-136.6 148.1 3.9 22.4 21.8 82 84 A E E -BC 32 62A 56 -20,-2.0 -20,-2.4 -2,-0.3 2,-0.5 -0.996 6.8-170.2-132.3 126.4 1.4 21.6 19.0 83 85 A I E -BC 31 61A 5 -52,-3.1 -52,-3.2 -2,-0.4 2,-0.6 -0.968 8.1-155.5-122.1 116.7 0.2 24.5 16.7 84 86 A V E -BC 30 60A 15 -24,-2.9 -25,-2.7 -2,-0.5 -24,-1.0 -0.812 8.6-164.9 -95.3 121.7 -2.7 23.9 14.4 85 87 A L E -BC 29 58A 0 -56,-3.1 -56,-2.1 -2,-0.6 2,-0.4 -0.879 7.0-164.9-104.4 135.7 -2.7 26.2 11.3 86 88 A A E BC 28 57A 13 -29,-3.0 -29,-3.3 -2,-0.4 -58,-0.2 -0.962 360.0 360.0-127.4 142.8 -5.9 26.4 9.3 87 89 A K 0 0 122 -60,-2.6 -31,-0.2 -2,-0.4 -32,-0.1 -0.333 360.0 360.0 -55.2 360.0 -6.7 27.8 5.8