==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RECEPTOR 28-JAN-97 1NGR . COMPND 2 MOLECULE: P75 LOW AFFINITY NEUROTROPHIN RECEPTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR G.OTTING,E.LIEPINSH . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4795.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 65 76.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 16 18.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 45.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 334 A G 0 0 68 0, 0.0 2,-0.2 0, 0.0 61,-0.0 0.000 360.0 360.0 360.0-150.5 -1.6 5.0 -14.2 2 335 A N - 0 0 123 1,-0.2 61,-2.6 2,-0.0 62,-0.3 -0.583 360.0 -89.3 -80.6 158.0 2.1 5.0 -13.4 3 336 A L B -A 62 0A 51 59,-0.3 59,-0.3 -2,-0.2 60,-0.2 0.014 22.4-123.9 -61.0 177.7 3.3 2.5 -10.8 4 337 A Y S > S+ 0 0 0 57,-1.6 3,-1.3 1,-0.2 58,-0.1 0.925 115.7 50.0 -90.3 -47.7 3.5 3.0 -7.1 5 338 A S T 3 S+ 0 0 47 56,-0.3 -1,-0.2 1,-0.3 57,-0.1 0.453 84.8 95.1 -59.8 -7.6 7.2 2.2 -6.9 6 339 A S T 3 S+ 0 0 61 1,-0.1 -1,-0.3 2,-0.1 -2,-0.2 0.836 71.8 71.8 -59.1 -40.3 7.5 4.7 -9.7 7 340 A L S < S- 0 0 65 -3,-1.3 -1,-0.1 -4,-0.2 5,-0.1 -0.806 70.2-176.5 -62.0 106.3 8.3 7.1 -6.9 8 341 A P + 0 0 125 0, 0.0 2,-0.2 0, 0.0 -1,-0.1 0.330 53.4 78.1 -85.4 1.3 11.8 5.8 -6.0 9 342 A L S > S- 0 0 110 1,-0.0 3,-2.8 4,-0.0 4,-0.2 -0.695 100.1 -76.6-124.5 168.6 12.2 8.2 -3.1 10 343 A T T 3> S+ 0 0 75 1,-0.3 4,-2.6 -2,-0.2 3,-0.4 0.479 107.2 86.1 -48.4 -12.3 11.2 8.9 0.6 11 344 A K T 34 S+ 0 0 44 1,-0.2 -1,-0.3 2,-0.2 4,-0.3 0.841 88.7 56.1 -52.4 -38.0 7.7 10.1 -0.4 12 345 A R T X> S+ 0 0 30 -3,-2.8 4,-0.9 2,-0.2 3,-0.6 0.840 103.9 51.1 -61.1 -32.7 7.1 6.3 -0.1 13 346 A E H >> S+ 0 0 71 -3,-0.4 4,-1.1 1,-0.3 3,-0.7 0.904 103.4 58.1 -70.7 -38.3 8.4 6.5 3.5 14 347 A E H 3X S+ 0 0 61 -4,-2.6 4,-0.9 1,-0.2 -1,-0.3 0.678 99.1 59.6 -57.7 -18.5 5.9 9.3 3.8 15 348 A V H <> S+ 0 0 1 -3,-0.6 4,-2.8 -4,-0.3 -1,-0.2 0.813 94.2 61.6 -79.7 -29.2 3.4 6.6 2.8 16 349 A E H << S+ 0 0 55 -4,-0.9 -2,-0.2 -3,-0.7 5,-0.2 0.866 105.9 48.8 -58.2 -31.0 4.4 4.6 5.9 17 350 A K H < S+ 0 0 98 -4,-1.1 3,-0.2 3,-0.1 -1,-0.2 0.881 121.6 34.3 -68.4 -41.5 3.1 7.7 7.7 18 351 A L H < S+ 0 0 25 -4,-0.9 2,-2.5 1,-0.2 -2,-0.2 0.961 110.5 55.7 -81.7 -61.3 -0.2 7.6 5.6 19 352 A L S < S- 0 0 2 -4,-2.8 29,-0.2 59,-0.1 -1,-0.2 -0.488 96.4-162.5 -73.1 61.5 -0.9 3.8 5.0 20 353 A N > - 0 0 45 -2,-2.5 2,-2.4 -3,-0.2 4,-2.1 0.049 31.1 -77.9 -57.5 161.5 -0.8 3.6 8.8 21 354 A G T 4 S+ 0 0 81 1,-0.2 -1,-0.2 -5,-0.2 -2,-0.0 -0.358 123.3 28.0 -70.8 68.6 -0.4 0.4 11.0 22 355 A D T >> S+ 0 0 77 -2,-2.4 4,-1.0 -3,-0.1 3,-0.8 -0.273 116.1 49.5 178.1 -71.5 -4.0 -0.8 10.7 23 356 A T H 3> S+ 0 0 7 1,-0.3 4,-2.7 2,-0.2 5,-0.2 0.791 98.5 68.7 -72.1 -28.7 -5.6 0.4 7.4 24 357 A W H 3X S+ 0 0 7 -4,-2.1 4,-3.1 1,-0.2 -1,-0.3 0.928 99.0 53.2 -51.7 -50.2 -2.7 -0.9 5.4 25 358 A R H <> S+ 0 0 87 -3,-0.8 4,-1.9 -5,-0.3 -1,-0.2 0.917 109.0 48.1 -42.1 -57.2 -3.9 -4.5 6.4 26 359 A H H X S+ 0 0 109 -4,-1.0 4,-1.8 1,-0.2 -2,-0.2 0.935 116.0 43.9 -54.6 -49.7 -7.4 -3.7 5.1 27 360 A L H X S+ 0 0 0 -4,-2.7 4,-1.3 2,-0.2 -2,-0.2 0.887 106.4 61.7 -60.2 -46.3 -5.9 -2.3 1.9 28 361 A A H <>S+ 0 0 0 -4,-3.1 5,-1.3 2,-0.2 3,-0.4 0.893 107.8 43.2 -51.3 -48.8 -3.4 -5.2 1.5 29 362 A G H ><5S+ 0 0 30 -4,-1.9 3,-1.4 1,-0.2 4,-0.3 0.938 111.6 53.2 -62.3 -47.6 -6.3 -7.7 1.2 30 363 A E H 3<5S+ 0 0 75 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.667 100.1 65.8 -64.2 -16.4 -8.2 -5.5 -1.1 31 364 A L T 3<5S- 0 0 17 -4,-1.3 -1,-0.3 -3,-0.4 -2,-0.2 0.032 124.1-100.4 -91.3 28.5 -5.0 -5.4 -3.3 32 365 A G T < 5S+ 0 0 67 -3,-1.4 2,-0.5 1,-0.2 -3,-0.2 0.785 79.3 135.5 51.9 39.3 -5.3 -9.1 -4.1 33 366 A Y < - 0 0 28 -5,-1.3 -1,-0.2 -4,-0.3 -2,-0.1 -0.969 57.2-120.5-109.1 123.7 -2.8 -10.4 -1.5 34 367 A Q >> - 0 0 127 -2,-0.5 4,-1.8 1,-0.1 3,-1.0 -0.172 29.6-104.1 -51.4 158.3 -4.0 -13.4 0.4 35 368 A P H 3> S+ 0 0 85 0, 0.0 4,-2.2 0, 0.0 5,-0.1 0.788 120.7 61.9 -65.1 -28.0 -4.2 -13.1 4.3 36 369 A E H 3> S+ 0 0 119 2,-0.2 4,-2.6 1,-0.2 5,-0.1 0.888 106.1 46.2 -61.6 -40.4 -1.0 -15.1 4.7 37 370 A H H <> S+ 0 0 96 -3,-1.0 4,-2.1 2,-0.2 -1,-0.2 0.899 108.8 54.8 -69.3 -39.7 0.9 -12.4 2.7 38 371 A I H X S+ 0 0 16 -4,-1.8 4,-1.0 2,-0.2 -2,-0.2 0.897 112.2 45.0 -58.9 -39.9 -0.8 -9.7 4.8 39 372 A D H >X S+ 0 0 67 -4,-2.2 4,-0.6 2,-0.2 3,-0.6 0.932 112.1 50.1 -70.9 -40.6 0.6 -11.5 7.8 40 373 A S H >X S+ 0 0 49 -4,-2.6 4,-2.4 1,-0.2 3,-0.5 0.839 105.4 59.7 -70.3 -12.4 4.0 -12.0 6.3 41 374 A F H 3< S+ 0 0 3 -4,-2.1 -1,-0.2 1,-0.3 9,-0.2 0.823 103.8 48.0 -88.2 -29.3 4.1 -8.3 5.4 42 375 A T H << S+ 0 0 66 -4,-1.0 -1,-0.3 -3,-0.6 -2,-0.2 0.548 114.8 48.4 -82.4 -8.7 3.7 -7.2 9.1 43 376 A H H << S+ 0 0 147 -4,-0.6 -2,-0.2 -3,-0.5 -1,-0.2 0.733 97.9 84.5 -90.9 -38.6 6.6 -9.8 9.8 44 377 A E S < S- 0 0 64 -4,-2.4 5,-0.1 -5,-0.1 6,-0.0 -0.149 112.5 -72.9 -60.1 168.5 8.8 -8.4 7.0 45 378 A A S S- 0 0 101 1,-0.2 -1,-0.1 2,-0.1 -4,-0.0 0.715 112.1 -23.7 -46.0 -50.5 11.0 -5.4 7.7 46 379 A C > - 0 0 46 1,-0.2 4,-2.5 -5,-0.1 5,-0.3 -0.877 64.0-126.0-145.9 151.2 8.1 -3.0 7.7 47 380 A P H > S+ 0 0 30 0, 0.0 4,-3.1 0, 0.0 5,-0.3 0.974 109.6 43.0 -54.7 -80.3 4.7 -3.7 5.9 48 381 A V H > S+ 0 0 6 -29,-0.2 4,-2.1 1,-0.2 5,-0.2 0.781 116.1 52.6 -41.7 -34.4 4.5 -0.4 3.8 49 382 A R H > S+ 0 0 114 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.995 119.6 30.1 -65.9 -61.3 8.2 -0.9 2.9 50 383 A A H X S+ 0 0 20 -4,-2.5 4,-2.1 -9,-0.2 5,-0.2 0.757 119.7 60.0 -74.9 -12.1 8.1 -4.5 1.6 51 384 A L H X>S+ 0 0 1 -4,-3.1 4,-2.7 -5,-0.3 5,-0.7 0.918 106.8 42.2 -76.3 -48.6 4.5 -3.8 0.5 52 385 A L H <5S+ 0 0 9 -4,-2.1 4,-0.3 -5,-0.3 -47,-0.2 0.753 118.0 48.6 -78.9 -19.8 5.3 -1.0 -1.9 53 386 A A H <5S+ 0 0 65 -4,-1.4 -2,-0.2 -5,-0.2 -1,-0.2 0.895 122.6 32.0 -75.3 -41.6 8.4 -2.9 -3.1 54 387 A S H ><5S+ 0 0 45 -4,-2.1 3,-1.8 2,-0.2 4,-0.3 0.939 123.9 41.9 -89.1 -48.8 6.4 -6.2 -3.7 55 388 A W G ><5S+ 0 0 13 -4,-2.7 3,-2.5 1,-0.3 -3,-0.2 0.945 111.0 61.8 -59.1 -41.2 3.0 -4.9 -4.6 56 389 A G G 3 > -A 3 0A 18 -2,-2.4 4,-2.0 -59,-0.3 3,-0.9 -0.357 59.2-111.6 -85.3 162.6 -0.4 1.8 -10.3 63 396 A L H 3> S+ 0 0 40 -61,-2.6 4,-2.6 1,-0.3 5,-0.2 0.949 123.1 52.8 -57.9 -41.4 -0.9 4.7 -7.9 64 397 A D H 3> S+ 0 0 75 -62,-0.3 4,-0.9 1,-0.2 -1,-0.3 0.643 105.1 55.3 -69.1 -16.3 -4.5 4.8 -9.2 65 398 A A H <> S+ 0 0 30 -3,-0.9 4,-2.2 2,-0.2 -1,-0.2 0.935 112.2 40.9 -78.5 -49.9 -4.9 1.1 -8.4 66 399 A L H X S+ 0 0 0 -4,-2.0 4,-2.7 1,-0.2 -2,-0.2 0.911 114.5 53.5 -64.6 -40.6 -3.9 1.6 -4.7 67 400 A L H X S+ 0 0 48 -4,-2.6 4,-2.4 -5,-0.2 -1,-0.2 0.839 108.4 50.8 -58.8 -39.2 -5.9 4.8 -4.6 68 401 A A H X S+ 0 0 49 -4,-0.9 4,-2.3 2,-0.2 -2,-0.2 0.934 109.9 47.9 -69.1 -47.2 -9.0 2.9 -5.8 69 402 A A H X S+ 0 0 1 -4,-2.2 4,-1.6 1,-0.2 -2,-0.2 0.911 114.5 48.6 -60.9 -40.2 -8.6 0.1 -3.2 70 403 A L H <>S+ 0 0 0 -4,-2.7 5,-1.9 2,-0.2 -2,-0.2 0.920 110.5 48.3 -59.7 -48.7 -8.3 2.8 -0.6 71 404 A R H ><5S+ 0 0 110 -4,-2.4 3,-1.3 1,-0.2 -2,-0.2 0.860 106.9 59.4 -68.9 -29.0 -11.3 4.8 -1.8 72 405 A R H 3<5S+ 0 0 143 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.886 107.9 43.3 -59.3 -40.1 -13.1 1.4 -1.8 73 406 A I T 3<5S- 0 0 44 -4,-1.6 -1,-0.3 -3,-0.1 -2,-0.2 0.114 118.9-119.7 -88.4 21.5 -12.4 1.1 2.0 74 407 A Q T < 5S+ 0 0 161 -3,-1.3 2,-2.0 1,-0.2 3,-0.4 0.531 72.6 138.4 44.2 19.1 -13.4 4.9 2.1 75 408 A R >>< + 0 0 67 -5,-1.9 4,-1.1 1,-0.2 3,-0.7 -0.332 14.7 145.0 -80.4 53.8 -9.9 5.7 3.4 76 409 A A H 3> + 0 0 26 -2,-2.0 4,-2.8 1,-0.2 5,-0.2 0.682 55.4 75.2 -69.5 -20.6 -9.9 8.6 1.1 77 410 A D H 3> S+ 0 0 89 -3,-0.4 4,-1.3 1,-0.2 -1,-0.2 0.926 101.1 41.5 -52.1 -48.9 -7.9 10.6 3.7 78 411 A I H <> S+ 0 0 2 -3,-0.7 4,-2.8 1,-0.2 -2,-0.2 0.870 113.3 55.3 -69.4 -38.5 -4.9 8.6 2.6 79 412 A V H X S+ 0 0 0 -4,-1.1 4,-1.9 2,-0.2 -2,-0.2 0.922 105.5 48.9 -61.4 -53.2 -5.9 8.9 -1.1 80 413 A E H X S+ 0 0 98 -4,-2.8 4,-0.7 2,-0.2 5,-0.4 0.834 113.7 47.9 -61.9 -29.7 -6.0 12.7 -1.1 81 414 A S H >< S+ 0 0 13 -4,-1.3 3,-1.5 -5,-0.2 -2,-0.2 0.949 109.6 53.4 -68.7 -46.1 -2.6 12.9 0.5 82 415 A L H 3< S+ 0 0 19 -4,-2.8 -2,-0.2 1,-0.3 -1,-0.2 0.794 96.2 67.6 -53.5 -38.2 -1.4 10.3 -2.1 83 416 A C H 3< S- 0 0 92 -4,-1.9 -1,-0.3 -5,-0.1 -2,-0.2 0.823 135.8 -59.0 -55.2 -38.8 -2.7 12.7 -4.7 84 417 A S << 0 0 86 -3,-1.5 -3,-0.2 -4,-0.7 -2,-0.1 0.037 360.0 360.0-158.2 -61.3 0.1 15.0 -3.6 85 418 A E 0 0 151 -5,-0.4 -3,-0.1 0, 0.0 -4,-0.0 -0.528 360.0 360.0 43.2 360.0 0.6 16.4 -0.0