==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 30-DEC-02 1NJ3 . COMPND 2 MOLECULE: NPL4; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR B.WANG,S.L.ALAM,H.H.MEYER,M.PAYNE,T.L.STEMMLER,D.R.DAVIS, . 31 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2559.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 5 16.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 9.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 6.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 106 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 80.0 -14.1 5.9 -6.5 2 2 A S + 0 0 130 1,-0.1 2,-0.2 2,-0.0 3,-0.1 0.983 360.0 150.5 60.4 84.6 -16.0 5.6 -3.3 3 3 A T - 0 0 57 1,-0.1 3,-0.1 15,-0.0 -1,-0.1 -0.582 55.3 -86.4-129.3-168.4 -14.6 2.6 -1.5 4 4 A S S S- 0 0 113 -2,-0.2 2,-0.3 1,-0.2 -1,-0.1 0.990 90.2 -40.1 -67.4 -80.6 -14.1 1.3 2.1 5 5 A A - 0 0 71 -3,-0.1 -1,-0.2 2,-0.0 0, 0.0 -0.797 55.2-151.4-159.1 111.4 -10.7 2.7 3.2 6 6 A M - 0 0 88 -2,-0.3 2,-0.3 -3,-0.1 11,-0.2 -0.124 16.5-138.7 -73.1 175.6 -7.6 3.1 1.2 7 7 A W E -A 16 0A 30 9,-2.2 9,-2.2 10,-0.1 2,-0.6 -0.934 7.8-124.0-137.9 161.2 -4.1 3.1 2.6 8 8 A A E -A 15 0A 76 -2,-0.3 7,-0.2 7,-0.2 -2,-0.0 -0.924 28.2-136.8-110.2 116.8 -0.8 4.9 2.3 9 9 A C - 0 0 14 5,-2.2 21,-0.1 -2,-0.6 14,-0.0 -0.175 2.4-143.8 -66.0 162.6 2.3 2.8 1.4 10 10 A Q S S+ 0 0 155 3,-0.1 -1,-0.1 2,-0.1 -2,-0.0 -0.098 91.8 42.2-119.6 33.3 5.6 3.4 3.2 11 11 A H S S+ 0 0 136 3,-0.1 -2,-0.0 17,-0.0 0, 0.0 0.456 126.4 21.7-137.7 -59.7 7.9 2.6 0.2 12 12 A C S S- 0 0 36 2,-0.1 3,-0.1 0, 0.0 -2,-0.1 0.763 94.9-135.9 -85.2 -28.4 6.5 4.2 -3.0 13 13 A T + 0 0 115 1,-0.3 2,-0.3 0, 0.0 -3,-0.1 0.875 57.4 128.8 73.5 41.9 4.5 6.7 -0.9 14 14 A F - 0 0 107 1,-0.0 -5,-2.2 -7,-0.0 -1,-0.3 -0.790 61.6 -99.0-122.5 166.4 1.3 6.4 -2.9 15 15 A M E -A 8 0A 87 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.543 38.1-167.1 -85.5 149.4 -2.3 5.7 -2.1 16 16 A N E -A 7 0A 6 -9,-2.2 -9,-2.2 -2,-0.2 5,-0.1 -0.980 23.0-102.2-139.6 151.4 -3.8 2.2 -2.5 17 17 A Q - 0 0 78 -2,-0.3 3,-0.4 -11,-0.2 -10,-0.1 -0.167 35.2-111.4 -66.2 163.1 -7.2 0.6 -2.6 18 18 A P S S+ 0 0 52 0, 0.0 3,-0.1 0, 0.0 -1,-0.1 0.559 118.6 44.9 -73.4 -8.0 -8.6 -1.3 0.5 19 19 A G S S+ 0 0 73 1,-0.1 2,-1.0 2,-0.0 3,-0.2 0.552 93.7 78.7-109.9 -13.2 -8.4 -4.5 -1.4 20 20 A T + 0 0 56 -3,-0.4 -1,-0.1 1,-0.2 4,-0.1 -0.430 50.4 165.4 -93.8 58.9 -4.9 -4.0 -2.9 21 21 A G S S+ 0 0 23 -2,-1.0 -1,-0.2 -3,-0.1 7,-0.1 0.799 73.2 52.7 -44.1 -30.5 -3.0 -5.0 0.3 22 22 A H S S- 0 0 125 7,-0.2 2,-0.2 -3,-0.2 6,-0.1 0.784 101.8-111.6 -72.7-110.9 0.0 -5.2 -2.0 23 23 A C - 0 0 11 2,-0.1 -7,-0.1 3,-0.1 -1,-0.1 -0.864 10.7-134.2 174.5 152.1 0.6 -2.1 -4.2 24 24 A E S S+ 0 0 150 -2,-0.2 -9,-0.1 -9,-0.2 -1,-0.0 0.011 105.8 38.9-104.8 25.4 0.5 -0.7 -7.7 25 25 A M S S+ 0 0 108 3,-0.1 -2,-0.1 -11,-0.1 -1,-0.0 0.510 128.1 18.4-134.2 -62.3 3.9 1.0 -7.3 26 26 A C S S- 0 0 33 2,-0.1 -3,-0.1 -4,-0.1 -2,-0.1 0.923 87.9-132.9 -81.9 -49.7 6.3 -1.1 -5.3 27 27 A S + 0 0 94 1,-0.3 -3,-0.1 2,-0.0 -5,-0.1 0.764 62.8 122.4 96.2 35.5 4.6 -4.5 -5.7 28 28 A L - 0 0 88 -6,-0.1 -1,-0.3 1,-0.1 -3,-0.1 -0.729 64.7 -88.7-121.5 170.7 4.9 -5.4 -2.0 29 29 A P - 0 0 65 0, 0.0 -7,-0.2 0, 0.0 -1,-0.1 -0.334 32.6-114.7 -79.0 162.0 2.5 -6.3 0.8 30 30 A R 0 0 125 1,-0.3 -8,-0.1 -2,-0.1 -22,-0.1 0.586 360.0 360.0 -71.1 -9.5 0.7 -3.8 3.1 31 31 A T 0 0 151 -10,-0.0 -1,-0.3 0, 0.0 -9,-0.0 -0.775 360.0 360.0-146.6 360.0 2.7 -5.4 5.9