==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 20-OCT-06 2NLN . COMPND 2 MOLECULE: ONCOMODULIN; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR M.T.HENZL . 108 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6124.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 76 70.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 3.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 0.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 3.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 21 19.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 40 37.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 5 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A S 0 0 74 0, 0.0 48,-0.8 0, 0.0 49,-0.1 0.000 360.0 360.0 360.0 -10.1 3.3 -2.8 -8.8 2 2 A I > + 0 0 0 46,-0.1 3,-1.6 47,-0.1 44,-0.2 0.228 360.0 79.7-166.7 -42.1 6.0 -4.3 -6.5 3 3 A T G > S+ 0 0 104 1,-0.3 3,-0.6 42,-0.1 5,-0.1 0.632 71.5 90.1 -58.8 -13.7 7.5 -7.3 -8.3 4 4 A D G 3 S+ 0 0 93 1,-0.3 -1,-0.3 38,-0.1 2,-0.3 0.935 113.8 0.4 -47.2 -49.8 9.6 -4.8 -10.3 5 5 A I G < S+ 0 0 76 -3,-1.6 -1,-0.3 37,-0.2 2,-0.3 -0.770 110.9 88.8-144.5 94.8 12.1 -5.1 -7.5 6 6 A L S < S- 0 0 30 -3,-0.6 2,-0.8 -2,-0.3 28,-0.1 -0.981 77.7 -83.4-174.0 166.1 11.2 -7.5 -4.7 7 7 A S > - 0 0 50 -2,-0.3 4,-1.4 1,-0.2 27,-0.1 -0.763 35.3-158.3 -83.6 113.3 11.3 -11.1 -3.3 8 8 A A H > S+ 0 0 65 -2,-0.8 4,-1.2 2,-0.2 -1,-0.2 0.904 88.8 43.7 -60.7 -46.1 8.3 -12.8 -4.9 9 9 A E H >> S+ 0 0 160 1,-0.2 4,-1.9 2,-0.2 3,-0.6 0.967 111.1 52.3 -65.5 -53.7 8.0 -15.5 -2.3 10 10 A D H 3> S+ 0 0 82 1,-0.3 4,-3.9 2,-0.2 5,-0.2 0.799 102.5 64.2 -52.7 -27.7 8.5 -13.3 0.7 11 11 A I H 3X S+ 0 0 15 -4,-1.4 4,-3.5 2,-0.2 5,-0.3 0.959 102.8 45.4 -61.8 -51.1 5.7 -11.2 -0.8 12 12 A A H > S- 0 0 101 61,-0.0 2,-2.7 0, 0.0 3,-1.5 -0.885 76.5 -70.8 172.3 163.5 -6.9 -9.3 7.0 21 21 A P T 34 S+ 0 0 52 0, 0.0 59,-0.3 0, 0.0 60,-0.3 -0.398 129.1 23.4 -73.1 68.3 -9.2 -6.3 6.8 22 22 A D T 34 S+ 0 0 99 -2,-2.7 -3,-0.1 58,-0.3 56,-0.0 0.263 108.7 70.6 157.4 -6.5 -7.5 -4.6 9.8 23 23 A T T <4 S- 0 0 27 -3,-1.5 -4,-0.1 -5,-0.1 58,-0.0 0.868 110.1 -75.6-101.2 -41.4 -3.9 -6.0 10.1 24 24 A F X + 0 0 68 -4,-0.8 4,-0.9 -6,-0.1 5,-0.3 0.328 50.2 172.7 137.6 74.0 -1.9 -4.6 7.2 25 25 A E H > S+ 0 0 11 -5,-0.3 4,-0.6 3,-0.1 -6,-0.1 0.893 85.5 27.6 -72.6 -40.4 -2.5 -6.2 3.8 26 26 A P H > S+ 0 0 0 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.929 120.9 49.6 -85.9 -52.8 -0.4 -3.8 1.8 27 27 A Q H > S+ 0 0 16 1,-0.2 4,-3.1 2,-0.2 5,-0.3 0.858 112.9 48.3 -55.7 -39.8 2.2 -2.6 4.3 28 28 A K H X>S+ 0 0 68 -4,-0.9 4,-1.0 2,-0.2 5,-0.8 0.916 108.9 54.1 -68.1 -42.9 3.1 -6.1 5.3 29 29 A F H X>S+ 0 0 23 -4,-0.6 5,-0.8 -5,-0.3 4,-0.7 0.935 119.5 33.7 -52.8 -51.4 3.3 -7.2 1.7 30 30 A F H X>S+ 0 0 0 -4,-2.5 4,-1.7 3,-0.2 5,-1.6 0.984 122.7 42.2 -70.4 -59.6 5.8 -4.4 1.1 31 31 A Q H <>S+ 0 0 93 -4,-3.1 5,-2.4 4,-0.3 -3,-0.2 0.955 115.4 42.9 -57.4 -67.0 7.7 -4.2 4.4 32 32 A T H <5S+ 0 0 78 -4,-1.0 -1,-0.2 -5,-0.3 -3,-0.2 0.916 132.6 21.7 -48.3 -54.6 8.2 -7.8 5.4 33 33 A S H << - 0 0 93 -2,-0.3 4,-0.7 1,-0.1 -2,-0.1 -0.143 35.1-103.2 -71.5 171.8 16.0 1.9 -1.8 40 40 A A H >> S+ 0 0 46 2,-0.2 3,-0.8 1,-0.2 4,-0.7 0.904 113.2 61.7 -64.3 -44.5 13.7 4.8 -2.4 41 41 A S H >> S+ 0 0 82 1,-0.3 3,-2.7 2,-0.2 4,-0.6 0.934 101.4 49.4 -49.2 -59.8 13.6 4.4 -6.2 42 42 A Q H >> S+ 0 0 9 1,-0.3 4,-2.5 2,-0.2 3,-0.6 0.790 98.4 71.5 -53.2 -26.7 12.1 0.9 -6.3 43 43 A V H < S+ 0 0 0 -4,-2.5 3,-4.4 1,-0.2 4,-0.3 0.963 100.7 63.5 -57.7 -55.7 6.1 -0.5 -5.1 47 47 A F H >< S+ 0 0 17 -4,-4.5 3,-0.7 1,-0.3 -1,-0.2 0.796 88.1 72.9 -34.8 -38.8 4.0 2.6 -4.5 48 48 A R T << S+ 0 0 127 -4,-0.8 -1,-0.3 -3,-0.6 -2,-0.2 0.685 77.6 80.4 -56.3 -19.0 2.0 1.5 -7.5 49 49 A F T < S+ 0 0 45 -3,-4.4 -1,-0.2 -48,-0.8 -2,-0.2 0.976 96.3 38.8 -53.1 -63.1 0.6 -1.3 -5.4 50 50 A I S < S- 0 0 3 -3,-0.7 2,-0.0 -4,-0.3 13,-0.0 0.454 126.6 -27.0 -63.7-144.8 -2.0 1.0 -3.7 51 51 A D - 0 0 0 46,-0.1 -1,-0.2 1,-0.1 7,-0.1 -0.351 56.1-132.0 -72.1 155.3 -3.8 3.6 -5.7 52 52 A N - 0 0 86 -3,-0.1 47,-0.2 5,-0.1 -1,-0.1 0.896 60.7 -78.1 -74.3 -43.4 -2.0 5.1 -8.8 53 53 A D > - 0 0 69 4,-0.2 2,-3.6 45,-0.1 4,-1.2 -0.035 49.3-172.1 172.4 -47.3 -2.6 8.8 -8.1 54 54 A Q B 4 S+a 57 0A 59 1,-0.2 4,-0.1 2,-0.2 -2,-0.0 -0.215 88.0 1.3 64.9 -55.1 -6.2 9.6 -9.0 55 55 A S T 4 S- 0 0 99 -2,-3.6 -1,-0.2 2,-0.7 3,-0.1 0.021 130.5 -59.8-151.7 31.6 -5.7 13.3 -8.5 56 56 A G T 4 S+ 0 0 51 1,-0.1 2,-0.3 0, 0.0 -2,-0.2 0.132 119.6 25.5 109.3 -20.1 -2.1 13.8 -7.5 57 57 A Y B < S-a 54 0A 141 -4,-1.2 -2,-0.7 41,-0.1 2,-0.3 -0.980 76.7-107.7-164.8 165.9 -2.3 11.6 -4.4 58 58 A L - 0 0 0 39,-0.3 39,-1.9 -2,-0.3 2,-0.3 -0.782 34.6-166.3-102.7 148.9 -4.0 8.7 -2.7 59 59 A D B >> -B 96 0B 50 -2,-0.3 4,-3.1 37,-0.3 3,-1.2 -0.988 37.5-102.6-143.2 151.8 -6.4 9.3 0.2 60 60 A G T 34 S+ 0 0 7 35,-2.3 4,-0.4 -2,-0.3 26,-0.1 0.687 121.6 51.8 -38.8 -31.9 -8.1 7.3 2.9 61 61 A D T >4 S+ 0 0 104 1,-0.1 3,-0.5 2,-0.1 -1,-0.3 0.941 118.8 33.7 -71.6 -50.2 -11.3 7.5 1.0 62 62 A E G X> S+ 0 0 61 -3,-1.2 3,-3.5 1,-0.2 4,-0.5 0.761 94.8 87.0 -77.4 -30.3 -9.9 6.3 -2.3 63 63 A L G >< S+ 0 0 0 -4,-3.1 3,-1.5 1,-0.3 4,-0.2 0.803 82.5 63.1 -42.6 -36.3 -7.4 3.9 -0.7 64 64 A K G X4 S+ 0 0 48 -3,-0.5 3,-0.8 -4,-0.4 12,-0.5 0.795 95.0 60.5 -60.8 -28.1 -10.2 1.3 -0.7 65 65 A Y G <> S+ 0 0 79 -3,-3.5 4,-0.9 1,-0.2 3,-0.4 0.659 73.9 96.6 -75.2 -13.8 -10.2 1.5 -4.5 66 66 A F H S+ 0 0 32 -3,-0.8 4,-2.3 -4,-0.2 5,-0.4 0.775 111.7 58.3 -85.6 -30.7 -7.9 -3.2 -5.4 68 68 A Q H 4 S+ 0 0 66 -4,-0.5 -2,-0.2 -3,-0.4 -1,-0.2 0.421 92.5 73.8 -78.9 0.1 -10.8 -1.9 -7.5 69 69 A K H < S+ 0 0 91 -4,-0.9 -1,-0.2 -3,-0.2 -2,-0.2 0.963 122.2 3.5 -74.2 -57.2 -8.2 -0.4 -9.7 70 70 A F H < S+ 0 0 165 -4,-0.6 -2,-0.2 -3,-0.2 -3,-0.1 0.821 144.2 40.2 -95.4 -44.0 -7.1 -3.6 -11.3 71 71 A Q S < S- 0 0 83 -4,-2.3 -3,-0.3 -5,-0.2 -4,-0.1 0.566 81.2-165.4 -85.0 -6.0 -9.5 -6.0 -9.6 72 72 A S S S+ 0 0 73 -5,-0.4 -4,-0.2 1,-0.2 -3,-0.1 0.699 76.3 70.8 20.3 41.0 -12.4 -3.5 -10.0 73 73 A D + 0 0 123 -6,-0.3 -1,-0.2 -8,-0.1 -5,-0.1 0.155 65.8 147.2-159.7 18.3 -14.3 -5.7 -7.5 74 74 A A - 0 0 13 -9,-0.1 -9,-0.1 1,-0.1 -10,-0.0 0.075 58.8-117.8 -55.7 172.3 -12.5 -5.1 -4.2 75 75 A R - 0 0 90 -11,-0.1 3,-0.2 3,-0.0 -1,-0.1 0.579 53.7-106.9 -88.1 -12.9 -14.3 -5.2 -0.8 76 76 A E - 0 0 99 -12,-0.5 -12,-0.2 1,-0.2 6,-0.2 0.848 49.9 -84.5 86.7 44.0 -13.3 -1.6 -0.3 77 77 A L >> - 0 0 0 -13,-0.5 5,-1.5 -14,-0.1 4,-0.6 0.613 66.2-119.7 32.6 27.4 -10.6 -2.2 2.3 78 78 A T H >5 - 0 0 56 -3,-0.2 4,-0.6 3,-0.2 -56,-0.1 0.164 44.1 -65.4 37.0-169.6 -13.4 -2.2 4.9 79 79 A E H 45S+ 0 0 191 -58,-0.1 4,-0.3 2,-0.1 -1,-0.2 0.925 137.0 41.1 -69.2 -45.8 -13.3 0.4 7.6 80 80 A S H >>5S+ 0 0 19 -59,-0.3 3,-2.0 1,-0.2 4,-0.7 0.895 102.7 61.6 -72.5 -47.5 -10.1 -1.1 9.0 81 81 A E H >X5S+ 0 0 0 -4,-0.6 3,-1.8 1,-0.3 4,-1.1 0.895 97.8 58.7 -55.0 -44.2 -7.9 -2.1 6.0 82 82 A T H 3X S+ 0 0 103 -3,-2.0 4,-3.8 -6,-0.3 -1,-0.3 0.909 94.4 53.3 -57.6 -41.3 -6.1 2.2 8.2 84 84 A S H << S+ 0 0 3 -3,-1.8 -1,-0.2 -4,-0.7 -2,-0.2 0.954 115.2 38.3 -55.4 -55.0 -3.1 0.3 7.0 85 85 A L H >< S+ 0 0 0 -4,-1.1 3,-1.4 2,-0.2 4,-0.4 0.918 116.2 52.4 -63.1 -46.4 -2.8 2.5 3.9 86 86 A M H >< S+ 0 0 46 -4,-4.4 3,-1.1 1,-0.3 -2,-0.2 0.946 113.2 44.1 -54.3 -50.3 -3.8 5.6 5.9 87 87 A D T 3< S+ 0 0 64 -4,-3.8 -1,-0.3 1,-0.2 -2,-0.2 0.474 93.2 90.7 -72.1 -3.5 -1.0 4.7 8.4 88 88 A A T < S- 0 0 0 -3,-1.4 -1,-0.2 -5,-0.2 17,-0.2 0.710 113.3 -42.9 -69.2 -23.2 1.2 4.0 5.4 89 89 A A S < S+ 0 0 9 -3,-1.1 2,-1.7 -4,-0.4 3,-0.5 -0.082 127.1 41.6-164.6 -86.8 2.6 7.5 5.2 90 90 A D B S+C 96 0B 28 6,-1.2 6,-0.6 1,-0.2 5,-0.4 -0.595 73.0 119.5 -87.2 80.1 0.6 10.7 5.6 91 91 A N + 0 0 68 -2,-1.7 3,-0.3 4,-0.2 -1,-0.2 0.742 63.5 57.6-108.9 -39.7 -1.7 9.7 8.4 92 92 A D S S+ 0 0 160 -3,-0.5 -2,-0.1 1,-0.2 -5,-0.1 0.642 130.3 2.4 -72.0 -15.8 -0.9 12.2 11.2 93 93 A G S S+ 0 0 59 3,-0.1 -1,-0.2 0, 0.0 -2,-0.1 0.098 137.2 23.5-165.4 42.8 -1.8 15.3 9.0 94 94 A D S S- 0 0 89 -3,-0.3 -3,-0.2 -4,-0.2 3,-0.1 0.262 70.0-141.6-175.8 -28.3 -3.1 14.5 5.6 95 95 A G + 0 0 13 -5,-0.4 -35,-2.3 1,-0.2 2,-0.3 0.655 65.6 119.3 58.5 14.8 -4.6 11.0 5.4 96 96 A K B -BC 59 90B 21 -6,-0.6 -6,-1.2 -37,-0.2 2,-0.5 -0.830 52.8-154.4-112.7 151.1 -3.0 10.7 1.9 97 97 A I + 0 0 0 -39,-1.9 -39,-0.3 -2,-0.3 2,-0.2 -0.863 23.6 166.3-126.3 98.7 -0.5 8.2 0.6 98 98 A G > - 0 0 7 -2,-0.5 4,-4.6 -41,-0.2 5,-0.3 -0.588 52.3-100.4-104.1 168.7 1.5 9.4 -2.3 99 99 A A H > S+ 0 0 26 1,-0.2 4,-3.5 2,-0.2 5,-0.2 0.943 126.6 45.3 -52.3 -49.0 4.7 7.9 -3.8 100 100 A D H > S+ 0 0 115 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.937 117.3 43.7 -58.5 -50.2 6.8 10.6 -1.9 101 101 A E H > S+ 0 0 31 2,-0.2 4,-1.5 1,-0.2 3,-0.2 0.945 114.6 50.1 -60.5 -49.0 4.8 10.1 1.3 102 102 A F H X S+ 0 0 2 -4,-4.6 4,-1.5 1,-0.3 3,-0.5 0.925 109.1 51.8 -54.8 -46.8 5.0 6.3 0.8 103 103 A Q H X S+ 0 0 36 -4,-3.5 4,-2.1 -5,-0.3 -1,-0.3 0.843 103.5 60.3 -58.8 -33.4 8.8 6.6 0.2 104 104 A E H X S+ 0 0 89 -4,-1.8 4,-1.9 -3,-0.2 -1,-0.2 0.883 101.4 52.9 -63.1 -39.7 8.9 8.6 3.5 105 105 A M H < S+ 0 0 70 -4,-1.5 3,-0.3 -3,-0.5 -2,-0.2 0.970 112.5 41.8 -60.2 -56.5 7.6 5.6 5.4 106 106 A V H < S+ 0 0 31 -4,-1.5 -1,-0.2 1,-0.3 -2,-0.2 0.844 119.1 47.6 -59.6 -33.9 10.2 3.1 4.1 107 107 A H H < 0 0 152 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.735 360.0 360.0 -79.0 -24.4 12.8 5.9 4.6 108 108 A S < 0 0 147 -4,-1.9 -1,-0.1 -3,-0.3 -3,-0.0 -0.347 360.0 360.0 -54.9 360.0 11.5 6.6 8.1