==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 14-JAN-03 1NNX . COMPND 2 MOLECULE: PROTEIN YGIW; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR C.LEHMANN,A.GALKIN,S.PULLALAREVU,E.SARIKAYA,W.KRAJEWSKI, . 93 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6053.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 35 37.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 12.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 9.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A Q 0 0 267 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 57.6 26.0 29.5 7.5 2 3 A G + 0 0 80 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.751 360.0 129.8-140.2-171.7 26.9 26.1 6.1 3 4 A G - 0 0 76 -2,-0.2 2,-0.5 2,-0.0 0, 0.0 -0.910 57.1 -41.4 150.3-176.3 27.6 24.4 2.9 4 5 A F - 0 0 168 -2,-0.3 2,-0.6 2,-0.0 -2,-0.0 -0.739 38.1-166.3 -87.9 128.5 30.0 22.2 1.0 5 6 A S + 0 0 58 -2,-0.5 22,-0.1 19,-0.1 -2,-0.0 -0.952 53.3 81.8-110.3 104.3 33.7 22.7 1.5 6 7 A G S S- 0 0 18 -2,-0.6 -2,-0.0 20,-0.1 20,-0.0 -0.973 79.9 -39.4 179.4-175.5 35.4 20.8 -1.4 7 8 A P 0 0 68 0, 0.0 67,-0.0 0, 0.0 19,-0.0 -0.256 360.0 360.0 -72.8 150.9 36.3 20.8 -5.0 8 9 A S 0 0 173 -2,-0.0 0, 0.0 0, 0.0 0, 0.0 -0.869 360.0 360.0-118.3 360.0 34.3 22.3 -7.9 9 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 10 23 A G 0 0 129 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -26.9 42.2 27.4 -7.7 11 24 A S - 0 0 100 1,-0.0 2,-0.5 18,-0.0 17,-0.3 -0.567 360.0-155.2 -79.0 134.1 43.5 28.9 -4.5 12 25 A V - 0 0 69 -2,-0.3 2,-0.3 15,-0.1 17,-0.2 -0.943 15.6-151.9-103.4 124.5 46.7 27.4 -3.0 13 26 A T - 0 0 35 15,-2.8 17,-0.4 -2,-0.5 2,-0.1 -0.701 17.0-111.4 -99.0 148.5 46.8 28.1 0.7 14 27 A T > - 0 0 68 -2,-0.3 4,-2.2 1,-0.1 5,-0.2 -0.444 21.7-122.6 -78.4 150.4 50.0 28.4 2.8 15 28 A V H > S+ 0 0 0 1,-0.2 4,-1.5 2,-0.2 -1,-0.1 0.937 111.0 54.2 -55.0 -44.4 50.9 25.7 5.3 16 29 A E H 4 S+ 0 0 99 1,-0.2 4,-0.4 2,-0.2 3,-0.3 0.910 111.6 42.6 -61.5 -41.5 51.0 28.3 8.1 17 30 A S H >4 S+ 0 0 49 1,-0.2 3,-1.4 2,-0.2 4,-0.3 0.842 105.4 63.5 -75.1 -28.4 47.6 29.7 7.4 18 31 A A H >< S+ 0 0 0 -4,-2.2 3,-1.6 1,-0.3 -1,-0.2 0.845 94.0 63.6 -61.8 -30.7 46.1 26.2 6.9 19 32 A K T 3< S+ 0 0 61 -4,-1.5 -1,-0.3 1,-0.3 -2,-0.2 0.761 100.8 52.7 -64.2 -21.5 46.9 25.5 10.5 20 33 A S T < S+ 0 0 87 -3,-1.4 -1,-0.3 -4,-0.4 -2,-0.2 0.482 88.1 105.0 -92.3 -1.6 44.5 28.3 11.5 21 34 A L S < S- 0 0 50 -3,-1.6 3,-0.1 -4,-0.3 4,-0.1 -0.365 78.4 -93.3 -82.9 163.3 41.6 27.1 9.6 22 35 A R - 0 0 200 1,-0.1 3,-0.3 2,-0.1 55,-0.2 -0.315 49.6 -89.0 -68.4 152.6 38.6 25.4 11.1 23 36 A D S S+ 0 0 57 1,-0.2 55,-0.2 56,-0.1 -1,-0.1 -0.268 111.9 29.3 -57.6 145.0 38.3 21.7 11.3 24 37 A D S S+ 0 0 119 53,-2.4 2,-0.4 1,-0.2 -1,-0.2 0.948 82.8 142.7 66.0 50.6 36.8 20.2 8.2 25 38 A T E -A 77 0A 34 52,-0.6 52,-3.1 -3,-0.3 2,-0.3 -0.992 49.5-125.9-121.2 130.9 37.9 22.7 5.7 26 39 A W E +A 76 0A 45 -2,-0.4 2,-0.3 50,-0.2 50,-0.2 -0.536 38.3 172.1 -76.6 130.5 39.0 21.8 2.1 27 40 A V E -A 75 0A 9 48,-2.9 48,-2.1 -2,-0.3 2,-0.4 -0.962 28.9-149.5-138.2 158.7 42.5 23.1 1.2 28 41 A T E +A 74 0A 16 -2,-0.3 -15,-2.8 -17,-0.3 2,-0.3 -0.993 24.1 179.9-124.8 129.8 45.0 22.8 -1.6 29 42 A L E -A 73 0A 2 44,-2.4 44,-2.6 -2,-0.4 2,-0.4 -0.933 15.2-152.4-128.1 155.8 48.8 23.2 -0.6 30 43 A R E +A 72 0A 110 -17,-0.4 2,-0.3 -2,-0.3 42,-0.2 -0.995 45.7 83.0-131.0 135.2 52.0 23.1 -2.6 31 44 A G E -A 71 0A 6 40,-2.4 40,-3.1 -2,-0.4 2,-0.4 -0.917 69.5 -51.4 172.6-147.9 55.3 22.1 -1.2 32 45 A N E -B 45 0A 44 13,-2.7 13,-3.1 -2,-0.3 2,-0.7 -0.974 27.8-133.4-130.0 141.4 57.4 19.1 -0.4 33 46 A I E +B 44 0A 13 36,-0.4 11,-0.2 -2,-0.4 36,-0.2 -0.849 33.7 172.3 -87.6 116.2 57.0 15.8 1.5 34 47 A V E + 0 0 59 9,-2.4 2,-0.3 -2,-0.7 -1,-0.1 0.592 53.4 9.7-108.1 -11.2 60.2 15.8 3.5 35 48 A E E -B 43 0A 128 8,-0.8 8,-2.9 32,-0.0 2,-0.6 -0.969 57.6-131.2-165.9 147.0 59.8 12.8 6.0 36 49 A R E -B 42 0A 143 -2,-0.3 6,-0.3 6,-0.2 3,-0.1 -0.926 22.4-176.0-100.2 124.7 57.6 9.9 6.7 37 50 A I E - 0 0 70 4,-3.0 2,-0.3 -2,-0.6 5,-0.2 0.746 59.0 -40.8 -94.8 -24.0 56.8 9.9 10.4 38 51 A S E > S-B 41 0A 59 3,-1.5 3,-0.8 0, 0.0 2,-0.4 -0.916 100.6 -18.1-176.5-166.8 54.8 6.6 10.8 39 52 A D T 3 S- 0 0 123 1,-0.3 3,-0.1 -2,-0.3 17,-0.0 -0.390 131.2 -19.8 -60.6 118.0 52.2 4.6 8.9 40 53 A D T 3 S+ 0 0 29 -2,-0.4 15,-2.4 1,-0.2 2,-0.5 0.388 111.0 115.4 63.6 0.5 50.6 7.0 6.5 41 54 A L E < +BC 38 54A 25 -3,-0.8 -4,-3.0 13,-0.2 -3,-1.5 -0.860 38.9 170.2-108.1 125.8 51.7 10.1 8.4 42 55 A Y E -BC 36 53A 16 11,-2.8 11,-2.7 -2,-0.5 2,-0.5 -0.872 34.8-116.2-127.4 159.0 54.2 12.5 6.6 43 56 A V E -BC 35 52A 20 -8,-2.9 -9,-2.4 -2,-0.3 -8,-0.8 -0.877 28.2-164.9-100.2 125.9 55.7 15.9 7.1 44 57 A F E -BC 33 51A 0 7,-3.0 7,-2.2 -2,-0.5 2,-0.4 -0.940 7.1-169.3-110.7 132.6 54.8 18.4 4.4 45 58 A K E +BC 32 50A 115 -13,-3.1 -13,-2.7 -2,-0.4 2,-0.2 -0.951 14.1 165.7-127.7 137.6 56.8 21.7 4.1 46 59 A D E > - C 0 49A 27 3,-2.4 3,-1.0 -2,-0.4 -15,-0.1 -0.774 59.4 -81.6-130.4-179.8 56.3 24.9 2.2 47 60 A A T 3 S+ 0 0 114 -2,-0.2 3,-0.1 1,-0.2 -16,-0.1 0.736 126.4 50.5 -59.5 -20.2 58.1 28.2 2.6 48 61 A S T 3 S- 0 0 47 1,-0.2 2,-0.3 0, 0.0 -1,-0.2 0.637 120.8 -59.9 -92.3 -16.5 55.8 29.2 5.5 49 62 A G E < -C 46 0A 19 -3,-1.0 -3,-2.4 2,-0.0 2,-0.3 -0.988 52.1 -81.6 161.3-174.2 56.0 26.1 7.8 50 63 A T E +C 45 0A 64 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.909 31.6 178.8-125.8 155.6 55.4 22.4 8.1 51 64 A I E -C 44 0A 6 -7,-2.2 -7,-3.0 -2,-0.3 2,-0.3 -0.989 32.2-108.3-151.9 151.1 52.3 20.3 8.8 52 65 A N E -Cd 43 85A 54 32,-0.6 34,-1.6 -2,-0.3 2,-0.4 -0.627 34.3-165.2 -84.5 142.6 51.6 16.6 9.2 53 66 A V E -Cd 42 86A 0 -11,-2.7 -11,-2.8 -2,-0.3 2,-0.7 -0.971 15.8-139.2-130.3 139.7 49.6 15.0 6.4 54 67 A D E +Cd 41 87A 65 32,-3.1 34,-2.4 -2,-0.4 2,-0.5 -0.910 24.0 177.8-100.6 116.8 47.9 11.6 6.2 55 68 A I - 0 0 0 -15,-2.4 2,-0.1 -2,-0.7 34,-0.1 -0.968 18.8-145.0-124.4 106.1 48.4 9.9 2.8 56 69 A D > - 0 0 68 -2,-0.5 3,-2.3 32,-0.4 4,-0.5 -0.363 30.0-107.8 -66.3 152.4 46.8 6.5 2.4 57 70 A H G > S+ 0 0 153 1,-0.3 3,-1.2 2,-0.2 4,-0.4 0.857 116.4 63.1 -50.0 -37.9 48.7 4.0 0.3 58 71 A K G 3 S+ 0 0 128 1,-0.2 3,-0.3 2,-0.1 -1,-0.3 0.669 87.6 71.5 -69.1 -10.2 46.0 4.3 -2.4 59 72 A R G < S+ 0 0 50 -3,-2.3 32,-0.5 1,-0.2 -1,-0.2 0.787 82.0 70.7 -78.5 -18.4 46.8 8.0 -3.1 60 73 A W S X S- 0 0 48 -3,-1.2 3,-1.9 -4,-0.5 -1,-0.2 0.882 70.9-170.6 -67.8 -37.2 50.1 7.4 -4.7 61 74 A N T 3 S- 0 0 141 -4,-0.4 3,-0.1 -3,-0.3 -1,-0.1 0.861 73.4 -47.7 49.6 46.4 48.8 5.9 -7.9 62 75 A G T 3 S+ 0 0 84 1,-0.3 2,-0.4 0, 0.0 -1,-0.3 0.343 107.5 128.3 81.9 -8.8 52.1 4.8 -9.4 63 76 A V < - 0 0 52 -3,-1.9 2,-0.5 28,-0.1 -1,-0.3 -0.660 47.5-151.4 -85.3 131.5 53.8 8.2 -8.7 64 77 A T - 0 0 105 -2,-0.4 2,-0.4 -3,-0.1 29,-0.0 -0.921 14.0-168.8-105.0 129.8 57.0 8.2 -6.8 65 78 A V + 0 0 29 -2,-0.5 6,-0.0 4,-0.0 -33,-0.0 -0.956 8.0 179.8-119.8 135.5 57.7 11.3 -4.7 66 79 A T > - 0 0 59 -2,-0.4 3,-1.6 4,-0.0 -33,-0.4 -0.776 47.8 -93.4-121.5 172.6 61.0 12.3 -3.0 67 80 A P T 3 S+ 0 0 76 0, 0.0 -32,-0.0 0, 0.0 -33,-0.0 0.769 121.8 60.2 -60.1 -23.4 61.7 15.5 -1.0 68 81 A K T 3 S+ 0 0 175 -36,-0.1 2,-0.3 2,-0.1 -34,-0.1 0.685 85.8 94.8 -79.8 -16.7 63.0 17.3 -4.0 69 82 A D S < S- 0 0 38 -3,-1.6 2,-0.5 -36,-0.2 -36,-0.4 -0.555 72.1-136.4 -76.1 129.1 59.7 17.0 -5.9 70 83 A T - 0 0 62 24,-0.5 24,-3.1 -2,-0.3 2,-0.3 -0.755 32.2-174.0 -80.8 133.9 57.2 19.8 -5.6 71 84 A V E -AE 31 93A 0 -40,-3.1 -40,-2.4 -2,-0.5 2,-0.5 -0.924 24.0-140.5-129.7 152.5 53.8 18.4 -5.1 72 85 A E E -AE 30 92A 20 20,-3.0 20,-2.2 -2,-0.3 2,-0.4 -0.968 22.6-170.1-108.3 130.0 50.3 19.7 -4.9 73 86 A I E -AE 29 91A 0 -44,-2.6 -44,-2.4 -2,-0.5 2,-0.4 -0.914 6.3-168.9-119.6 145.4 48.0 18.1 -2.2 74 87 A Q E +AE 28 90A 30 16,-1.9 15,-2.9 -2,-0.4 16,-1.7 -0.996 34.1 100.2-129.6 138.6 44.3 18.5 -1.8 75 88 A G E -AE 27 88A 1 -48,-2.1 -48,-2.9 -2,-0.4 2,-0.4 -0.966 63.5 -54.8 174.1-164.3 42.3 17.4 1.2 76 89 A E E -AE 26 87A 43 11,-1.7 11,-2.8 -2,-0.3 2,-0.3 -0.832 38.3-120.8-109.1 139.2 40.7 18.4 4.5 77 90 A V E -AE 25 86A 1 -52,-3.1 -53,-2.4 -2,-0.4 -52,-0.6 -0.604 29.4-162.8 -69.1 126.5 42.1 20.2 7.4 78 91 A D E + E 0 85A 60 7,-3.0 7,-1.4 -2,-0.3 2,-0.5 -0.946 15.2 177.5-116.4 107.1 41.6 17.8 10.4 79 92 A K E + E 0 84A 68 -2,-0.6 2,-0.2 5,-0.2 5,-0.2 -0.951 7.1 164.8-123.9 128.8 41.9 19.8 13.6 80 93 A D E > - E 0 83A 87 3,-2.7 3,-0.8 -2,-0.5 -2,-0.0 -0.697 56.1 -83.9-125.5-179.6 41.4 18.5 17.1 81 94 A W T 3 S+ 0 0 237 1,-0.2 3,-0.1 -2,-0.2 -2,-0.0 0.842 127.7 29.0 -59.5 -28.1 42.3 19.8 20.5 82 95 A N T 3 S+ 0 0 95 1,-0.1 2,-0.3 0, 0.0 -1,-0.2 0.372 122.0 23.7-116.5 6.9 45.8 18.3 20.1 83 96 A S E < - E 0 80A 45 -3,-0.8 -3,-2.7 2,-0.0 2,-0.4 -1.000 45.3-152.9-165.0 160.4 46.6 18.3 16.5 84 97 A V E + E 0 79A 31 -2,-0.3 -32,-0.6 -5,-0.2 2,-0.3 -0.991 30.0 154.1-136.4 139.4 46.2 19.7 13.0 85 98 A E E -dE 52 78A 41 -7,-1.4 -7,-3.0 -2,-0.4 2,-0.5 -0.969 40.8-115.8-152.7 165.8 46.8 17.5 10.0 86 99 A I E -dE 53 77A 3 -34,-1.6 -32,-3.1 -2,-0.3 2,-0.9 -0.967 18.1-145.7-107.4 128.1 45.7 17.4 6.4 87 100 A D E -dE 54 76A 45 -11,-2.8 -11,-1.7 -2,-0.5 2,-0.4 -0.851 29.4-139.3 -91.7 109.4 43.7 14.2 5.3 88 101 A V E + E 0 75A 6 -34,-2.4 -32,-0.4 -2,-0.9 -13,-0.3 -0.547 34.1 172.1 -81.7 125.8 45.0 14.0 1.8 89 102 A K E S+ 0 0 103 -15,-2.9 2,-0.3 -2,-0.4 -14,-0.2 0.711 73.9 15.1 -95.0 -24.8 42.6 13.0 -1.1 90 103 A Q E - E 0 74A 66 -16,-1.7 -16,-1.9 2,-0.0 2,-0.4 -0.989 55.8-173.7-154.1 137.4 45.0 13.7 -3.9 91 104 A I E + E 0 73A 18 -32,-0.5 2,-0.3 -2,-0.3 -18,-0.2 -1.000 13.4 170.7-132.6 130.5 48.7 14.2 -4.4 92 105 A R E - E 0 72A 129 -20,-2.2 -20,-3.0 -2,-0.4 2,-0.2 -0.991 32.0-116.6-138.1 146.3 50.3 15.1 -7.7 93 106 A K E E 0 71A 91 -2,-0.3 -22,-0.3 -22,-0.2 -28,-0.0 -0.552 360.0 360.0 -77.2 147.6 53.8 16.2 -8.8 94 107 A V 0 0 72 -24,-3.1 -24,-0.5 -2,-0.2 -1,-0.0 -0.665 360.0 360.0-145.7 360.0 54.2 19.7 -10.2