==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 01-FEB-99 1NPS . COMPND 2 MOLECULE: DEVELOPMENT-SPECIFIC PROTEIN S; . SOURCE 2 ORGANISM_SCIENTIFIC: MYXOCOCCUS XANTHUS; . AUTHOR M.WENK,R.BAUMGARTNER,E.M.MAYER,R.HUBER,T.A.HOLAK,R.JAENICKE . 87 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4527.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 63.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 31 35.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 6 6.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 2 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 78 0, 0.0 2,-0.3 0, 0.0 45,-0.0 0.000 360.0 360.0 360.0 -86.8 2.4 1.3 -6.3 2 2 A N - 0 0 60 17,-0.1 2,-0.3 45,-0.1 45,-0.1 -0.724 360.0-137.6-114.9 158.2 2.1 1.5 -2.5 3 3 A I E -A 18 0A 0 15,-1.7 15,-2.6 -2,-0.3 2,-0.5 -0.748 21.1-139.8-100.6 156.0 3.2 -0.7 0.4 4 4 A T E -AB 17 42A 23 38,-1.6 38,-2.5 -2,-0.3 2,-0.4 -0.988 12.4-155.8-123.4 122.9 0.7 -1.2 3.3 5 5 A V E -AB 16 41A 1 11,-2.2 11,-1.5 -2,-0.5 2,-0.3 -0.871 7.8-156.5 -99.7 138.9 2.0 -1.1 6.9 6 6 A F E -AB 15 40A 4 34,-3.1 33,-2.9 -2,-0.4 34,-1.2 -0.833 20.9-139.0-117.4 147.7 0.1 -2.9 9.7 7 7 A Y E S+ 0 0 30 7,-2.1 2,-0.3 -2,-0.3 6,-0.2 0.813 90.4 37.7 -71.6 -29.0 0.1 -2.3 13.5 8 8 A N E > S-A 12 0A 95 4,-1.8 4,-0.9 6,-0.2 3,-0.4 -0.776 94.7 -90.5-121.1 161.9 0.1 -6.1 14.2 9 9 A E T >4 S+ 0 0 74 -2,-0.3 3,-0.6 1,-0.2 61,-0.2 -0.129 102.3 35.5 -64.8 165.2 1.7 -9.1 12.7 10 10 A D T 34 S- 0 0 88 59,-2.9 -1,-0.2 29,-0.3 59,-0.1 0.837 132.4 -66.4 57.6 35.7 0.2 -11.2 9.9 11 11 A F T 34 S+ 0 0 58 -3,-0.4 2,-0.2 57,-0.2 -1,-0.2 0.882 97.9 137.5 55.3 48.9 -1.4 -8.2 8.3 12 12 A Q E << +A 8 0A 129 -4,-0.9 -4,-1.8 -3,-0.6 -5,-0.3 -0.744 39.7 18.5-117.8 168.5 -3.8 -7.4 11.2 13 13 A G E S+ 0 0 40 -2,-0.2 0, 0.0 -6,-0.2 0, 0.0 -0.133 103.7 5.6 72.8-170.8 -4.9 -4.2 12.9 14 14 A K E S- 0 0 110 -8,-0.1 -7,-2.1 1,-0.1 2,-0.3 -0.168 70.4-167.7 -48.3 134.0 -4.6 -0.5 11.9 15 15 A Q E -A 6 0A 120 -9,-0.2 2,-0.3 -8,-0.1 -9,-0.2 -0.954 14.7-178.4-134.5 148.9 -3.3 -0.1 8.4 16 16 A V E -A 5 0A 35 -11,-1.5 -11,-2.2 -2,-0.3 2,-0.3 -0.983 22.0-130.6-147.4 134.9 -2.0 2.8 6.2 17 17 A D E -A 4 0A 89 -2,-0.3 -13,-0.2 -13,-0.2 -2,-0.0 -0.605 17.2-164.4 -87.0 141.9 -0.8 2.9 2.5 18 18 A L E -A 3 0A 0 -15,-2.6 -15,-1.7 -2,-0.3 3,-0.1 -0.949 4.4-157.2-128.7 111.3 2.5 4.6 1.6 19 19 A P - 0 0 60 0, 0.0 64,-0.2 0, 0.0 -17,-0.1 -0.190 50.4 -59.6 -75.3 176.6 3.3 5.5 -2.0 20 20 A P S S+ 0 0 55 0, 0.0 2,-0.3 0, 0.0 64,-0.2 -0.318 91.7 89.1 -57.2 141.2 6.9 6.0 -3.1 21 21 A G E S-D 83 0B 24 62,-2.0 62,-3.2 -3,-0.1 2,-0.5 -0.899 76.2 -74.0 155.8-179.4 8.8 8.6 -1.2 22 22 A N E -D 82 0B 88 -2,-0.3 2,-0.5 60,-0.2 60,-0.2 -0.908 40.3-166.6-111.5 130.8 10.9 9.3 1.9 23 23 A Y E -D 81 0B 27 58,-3.6 58,-2.7 -2,-0.5 34,-0.2 -0.938 3.3-165.8-126.0 114.8 9.2 9.4 5.3 24 24 A T > - 0 0 39 -2,-0.5 4,-2.4 56,-0.2 5,-0.2 -0.267 44.0 -94.1 -82.8 175.4 10.8 10.7 8.5 25 25 A R H > S+ 0 0 125 1,-0.2 4,-2.2 2,-0.2 5,-0.1 0.910 127.8 46.9 -56.8 -46.4 9.3 10.0 12.0 26 26 A A H > S+ 0 0 68 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.864 111.8 50.4 -66.0 -37.5 7.4 13.2 12.0 27 27 A Q H > S+ 0 0 91 2,-0.2 4,-0.9 1,-0.2 -2,-0.2 0.869 110.1 50.5 -69.9 -34.0 6.1 12.6 8.4 28 28 A L H ><>S+ 0 0 5 -4,-2.4 5,-2.5 1,-0.2 3,-0.9 0.938 108.8 52.0 -67.1 -43.7 4.9 9.1 9.4 29 29 A A H ><5S+ 0 0 62 -4,-2.2 3,-1.5 1,-0.3 -2,-0.2 0.857 104.6 56.0 -60.1 -37.3 3.1 10.6 12.4 30 30 A A H 3<5S+ 0 0 86 -4,-1.7 -1,-0.3 1,-0.3 -2,-0.2 0.768 106.9 51.4 -68.5 -20.6 1.3 13.1 10.1 31 31 A L T <<5S- 0 0 81 -3,-0.9 -1,-0.3 -4,-0.9 -2,-0.2 0.291 127.1 -99.4 -99.1 10.5 0.1 10.1 8.1 32 32 A G T < 5S+ 0 0 40 -3,-1.5 2,-0.7 1,-0.2 -3,-0.2 0.694 83.4 128.9 81.6 18.9 -1.3 8.4 11.2 33 33 A I < - 0 0 2 -5,-2.5 -1,-0.2 -6,-0.1 -2,-0.2 -0.900 49.1-146.9-110.3 100.6 1.6 6.0 11.7 34 34 A E > - 0 0 105 -2,-0.7 3,-0.6 1,-0.1 4,-0.3 -0.294 31.0 -87.5 -65.5 150.7 2.9 6.1 15.2 35 35 A N T 3 S+ 0 0 40 1,-0.2 44,-0.2 2,-0.1 -1,-0.1 -0.237 105.1 2.8 -60.0 144.2 6.6 5.6 16.0 36 36 A N T 3 S+ 0 0 54 42,-2.1 -1,-0.2 1,-0.1 43,-0.1 0.905 99.1 109.2 44.9 55.5 7.8 2.0 16.5 37 37 A T < + 0 0 22 -3,-0.6 -2,-0.1 41,-0.4 -1,-0.1 0.578 36.5 111.5-127.8 -21.6 4.4 0.4 15.8 38 38 A I + 0 0 2 -4,-0.3 38,-2.6 40,-0.2 39,-0.4 -0.298 27.3 162.8 -61.5 131.5 4.7 -1.4 12.5 39 39 A S + 0 0 4 -33,-2.9 32,-0.3 1,-0.4 2,-0.3 0.504 62.5 17.2-127.4 -14.1 4.6 -5.2 12.8 40 40 A S E -B 6 0A 0 -34,-1.2 -34,-3.1 -31,-0.2 -1,-0.4 -0.987 60.1-161.8-158.9 152.3 3.9 -6.4 9.2 41 41 A V E -BC 5 68A 0 27,-2.3 27,-3.2 -2,-0.3 2,-0.4 -1.000 11.7-146.5-143.0 142.5 4.0 -5.0 5.7 42 42 A K E -B 4 0A 82 -38,-2.5 -38,-1.6 -2,-0.3 25,-0.1 -0.890 16.8-173.6-105.7 132.9 2.6 -5.9 2.3 43 43 A V - 0 0 7 -2,-0.4 24,-0.4 -40,-0.2 -40,-0.1 -0.910 5.7-163.0-131.9 106.2 4.8 -5.1 -0.7 44 44 A P > - 0 0 50 0, 0.0 3,-1.2 0, 0.0 -2,-0.0 -0.329 40.9 -68.9 -80.6 170.0 3.3 -5.6 -4.2 45 45 A P T 3 S+ 0 0 125 0, 0.0 3,-0.1 0, 0.0 21,-0.1 -0.150 115.9 34.5 -56.1 147.6 5.4 -5.9 -7.5 46 46 A G T 3 S+ 0 0 29 40,-0.3 40,-2.9 1,-0.1 2,-0.3 0.341 108.3 68.2 90.6 -11.4 7.2 -2.8 -8.7 47 47 A V E < -E 85 0B 8 -3,-1.2 2,-0.3 38,-0.3 38,-0.2 -0.971 50.3-176.9-140.3 158.9 8.0 -1.3 -5.2 48 48 A K E -E 84 0B 52 36,-2.0 36,-3.2 -2,-0.3 2,-0.3 -0.941 12.9-144.4-147.9 162.9 10.2 -2.0 -2.2 49 49 A A E -EF 83 64B 0 15,-2.0 15,-2.7 -2,-0.3 2,-0.5 -0.969 6.4-151.2-135.2 149.6 10.8 -0.4 1.2 50 50 A I E -EF 82 63B 15 32,-2.0 32,-1.7 -2,-0.3 2,-0.5 -0.991 18.7-157.9-119.7 115.6 13.7 0.1 3.6 51 51 A L E -EF 81 62B 0 11,-2.6 11,-1.7 -2,-0.5 2,-0.4 -0.856 8.8-160.2 -97.7 131.3 12.6 0.3 7.2 52 52 A Y E -EF 80 61B 12 28,-2.5 27,-2.9 -2,-0.5 28,-1.2 -0.912 21.9-147.8-115.6 143.0 14.9 2.1 9.7 53 53 A Q E S+ 0 0 63 7,-2.4 2,-0.3 -2,-0.4 6,-0.2 0.757 87.2 52.4 -75.9 -27.9 15.1 1.8 13.4 54 54 A N E > S- F 0 58B 86 4,-1.8 4,-0.8 6,-0.4 3,-0.5 -0.798 91.2-108.3-110.0 154.3 16.2 5.4 13.7 55 55 A D T 4 S+ 0 0 78 -2,-0.3 3,-0.3 1,-0.2 25,-0.2 -0.286 100.4 48.3 -67.7 162.7 14.7 8.6 12.3 56 56 A G T 4 S- 0 0 45 23,-0.2 -1,-0.2 1,-0.2 3,-0.1 0.763 127.6 -76.4 76.1 21.3 16.6 10.2 9.5 57 57 A F T 4 S+ 0 0 64 -3,-0.5 2,-0.3 1,-0.2 -1,-0.2 0.891 99.5 119.0 56.8 45.8 17.0 6.9 7.5 58 58 A A E < +F 54 0B 45 -4,-0.8 -4,-1.8 -3,-0.3 -1,-0.2 -0.862 37.4 39.0-135.6 168.8 19.8 5.6 9.7 59 59 A G E S- 0 0 41 -2,-0.3 2,-0.1 -6,-0.2 -3,-0.0 -0.499 99.1 -8.8 95.6-163.6 20.5 2.6 12.0 60 60 A D E S+ 0 0 92 -2,-0.2 -7,-2.4 -8,-0.1 -6,-0.4 -0.443 77.5 174.7 -66.2 150.1 19.7 -1.0 11.8 61 61 A Q E -F 52 0B 94 -9,-0.2 2,-0.4 -8,-0.1 -9,-0.2 -0.960 27.8-145.0-153.3 169.4 17.3 -1.6 8.9 62 62 A I E -F 51 0B 54 -11,-1.7 -11,-2.6 -2,-0.3 2,-0.6 -0.994 13.0-142.4-144.4 132.8 15.5 -4.2 6.7 63 63 A E E -F 50 0B 108 -2,-0.4 2,-0.5 -13,-0.2 -13,-0.2 -0.877 17.1-162.7 -97.6 121.4 14.8 -4.2 3.0 64 64 A V E +F 49 0B 6 -15,-2.7 -15,-2.0 -2,-0.6 3,-0.1 -0.931 22.3 164.3-106.7 127.9 11.4 -5.6 2.1 65 65 A V S S+ 0 0 95 -2,-0.5 2,-0.3 -17,-0.2 -18,-0.1 0.335 70.7 18.4-121.1 5.1 10.7 -6.7 -1.5 66 66 A A S S- 0 0 54 -25,-0.1 -1,-0.2 -21,-0.1 -25,-0.1 -0.942 106.4 -46.7-162.4 170.8 7.6 -8.8 -0.8 67 67 A N - 0 0 93 -24,-0.4 2,-0.4 -2,-0.3 -25,-0.2 -0.108 48.8-166.8 -50.3 139.0 4.9 -9.4 1.8 68 68 A A B -C 41 0A 19 -27,-3.2 -27,-2.3 1,-0.1 -57,-0.2 -0.904 14.8-170.6-136.7 104.4 6.3 -9.8 5.4 69 69 A E S S+ 0 0 113 -2,-0.4 -59,-2.9 -29,-0.2 2,-0.3 0.632 80.4 16.3 -65.1 -21.7 4.0 -11.1 8.1 70 70 A E - 0 0 98 -61,-0.2 -30,-0.1 -29,-0.1 -29,-0.1 -0.971 59.2-149.1-148.3 164.4 6.5 -10.2 10.7 71 71 A L > - 0 0 7 -32,-0.3 3,-2.2 -2,-0.3 4,-0.2 0.164 25.3-153.5-124.7 15.2 9.7 -8.0 11.1 72 72 A G G > S+ 0 0 36 1,-0.3 3,-1.6 2,-0.2 -1,-0.3 -0.180 79.3 5.9 50.1-123.2 11.8 -9.9 13.6 73 73 A P G 3 S+ 0 0 101 0, 0.0 -1,-0.3 0, 0.0 -2,-0.0 0.685 131.0 56.7 -63.8 -24.3 14.1 -7.4 15.4 74 74 A L G X S+ 0 0 3 -3,-2.2 3,-1.7 -35,-0.0 -2,-0.2 0.402 75.0 128.1 -89.2 3.5 12.5 -4.3 13.8 75 75 A N T < S- 0 0 47 -3,-1.6 -36,-0.2 1,-0.3 -37,-0.1 -0.405 88.9 -2.6 -59.6 132.1 9.1 -5.2 15.0 76 76 A N T 3 S+ 0 0 73 -38,-2.6 -1,-0.3 1,-0.1 -37,-0.1 0.873 119.3 93.1 50.1 42.0 7.6 -2.1 16.8 77 77 A N < + 0 0 61 -3,-1.7 2,-0.5 -39,-0.4 -2,-0.1 0.064 45.7 120.3-149.4 23.0 11.0 -0.4 16.1 78 78 A V + 0 0 3 -40,-0.1 -42,-2.1 1,-0.1 -41,-0.4 -0.878 20.7 162.1 -99.7 127.5 10.6 1.5 12.8 79 79 A S + 0 0 8 -27,-2.9 2,-0.3 -2,-0.5 -23,-0.2 0.548 66.0 20.6-117.2 -16.8 11.1 5.3 12.9 80 80 A S E - E 0 52B 0 -28,-1.2 -28,-2.5 -25,-0.2 -1,-0.3 -0.979 62.6-165.8-150.6 154.7 11.7 6.2 9.3 81 81 A I E -DE 23 51B 0 -58,-2.7 -58,-3.6 -2,-0.3 2,-0.5 -0.999 12.5-159.6-146.6 143.2 10.9 4.6 5.9 82 82 A R E -DE 22 50B 90 -32,-1.7 -32,-2.0 -2,-0.3 2,-0.6 -0.995 13.2-160.9-122.4 117.5 12.0 5.0 2.2 83 83 A V E -DE 21 49B 4 -62,-3.2 -62,-2.0 -2,-0.5 2,-0.4 -0.930 15.7-166.7-100.8 123.3 9.5 3.5 -0.3 84 84 A I E - E 0 48B 45 -36,-3.2 -36,-2.0 -2,-0.6 2,-0.3 -0.940 20.1-127.6-123.3 132.1 11.2 3.0 -3.6 85 85 A S E - E 0 47B 69 -2,-0.4 -38,-0.3 -38,-0.2 -39,-0.1 -0.545 18.3-174.5 -71.9 127.7 9.9 2.2 -7.1 86 86 A V 0 0 78 -40,-2.9 -40,-0.3 -2,-0.3 -39,-0.1 -0.747 360.0 360.0-125.1 76.6 11.5 -0.8 -8.8 87 87 A P 0 0 160 0, 0.0 -1,-0.2 0, 0.0 -40,-0.0 0.526 360.0 360.0 -9.8 360.0 9.9 -0.6 -12.2