==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER OXIDOREDUCTASE 27-OCT-06 2NPB . COMPND 2 MOLECULE: SELENOPROTEIN W; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR F.L.AACHMANN,D.E.FOMENKO,A.SORAGNI,V.N.GLADYSHEV,A.DIKIY . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5703.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 69.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 8 9.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 12.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 31.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 188 0, 0.0 2,-0.1 0, 0.0 32,-0.0 0.000 360.0 360.0 360.0 162.4 2.0 0.1 -0.4 2 2 A A - 0 0 49 32,-0.0 2,-0.4 86,-0.0 32,-0.2 -0.222 360.0-120.2 -65.2 178.5 4.7 2.2 -2.2 3 3 A L E -a 34 0A 19 30,-0.7 32,-2.8 29,-0.1 2,-0.5 -0.995 11.6-140.0-132.3 133.1 3.4 4.9 -4.6 4 4 A A E -a 35 0A 44 -2,-0.4 49,-3.0 30,-0.2 2,-0.3 -0.803 18.4-172.7 -92.0 124.3 4.1 5.2 -8.4 5 5 A V E -aB 36 52A 1 30,-1.4 32,-2.6 -2,-0.5 2,-0.3 -0.863 6.0-169.8-111.7 149.7 4.7 8.8 -9.9 6 6 A R E -aB 37 51A 62 45,-3.0 45,-2.3 -2,-0.3 2,-0.4 -0.966 18.9-161.5-137.6 155.3 5.0 9.6 -13.6 7 7 A V E -aB 38 50A 2 30,-0.9 32,-1.0 -2,-0.3 2,-0.5 -0.947 11.8-157.3-135.8 109.3 6.0 12.4 -16.0 8 8 A V E + B 0 49A 38 41,-2.2 41,-2.5 -2,-0.4 2,-0.3 -0.791 31.2 166.9 -81.7 128.2 4.8 12.1 -19.6 9 9 A Y - 0 0 18 -2,-0.5 2,-0.6 39,-0.2 39,-0.1 -0.970 43.8-117.6-145.6 159.7 7.2 14.3 -21.8 10 10 A S - 0 0 16 37,-0.5 2,-2.8 -2,-0.3 36,-0.1 -0.900 33.2-133.2 -99.5 108.3 8.4 15.3 -25.3 11 11 A G + 0 0 60 -2,-0.6 2,-2.2 29,-0.3 3,-0.1 -0.223 41.1 160.4 -66.2 55.8 12.1 14.3 -25.6 12 12 A A - 0 0 83 -2,-2.8 -1,-0.1 1,-0.1 -2,-0.1 -0.372 66.5 -83.0 -73.3 59.4 13.3 17.7 -27.2 13 13 A C S S+ 0 0 112 -2,-2.2 2,-0.6 1,-0.1 -1,-0.1 -0.044 113.5 55.1 58.5-175.4 17.0 16.9 -26.1 14 14 A G > + 0 0 51 1,-0.2 4,-1.2 -3,-0.1 -1,-0.1 0.339 65.7 130.9 54.5 -0.1 18.3 17.7 -22.5 15 15 A Y H > + 0 0 126 -2,-0.6 4,-2.7 1,-0.2 5,-0.2 0.821 52.4 68.5 -67.9 -37.9 15.6 15.7 -20.7 16 16 A K H > S+ 0 0 115 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.884 107.8 35.3 -46.8 -61.6 17.7 13.6 -18.2 17 17 A P H > S+ 0 0 91 0, 0.0 4,-2.6 0, 0.0 -1,-0.2 0.896 115.7 57.4 -64.0 -37.2 18.9 16.4 -15.9 18 18 A K H < S+ 0 0 72 -4,-1.2 4,-0.4 2,-0.2 -2,-0.2 0.864 114.5 39.1 -58.7 -41.1 15.5 18.3 -16.3 19 19 A Y H >X S+ 0 0 20 -4,-2.7 4,-2.8 2,-0.1 3,-1.9 0.976 115.3 51.5 -63.0 -65.1 13.8 15.2 -15.0 20 20 A L H 3X S+ 0 0 45 -4,-2.7 4,-2.2 1,-0.3 5,-0.3 0.806 97.7 63.1 -54.2 -39.2 16.4 14.3 -12.3 21 21 A Q H 3< S+ 0 0 132 -4,-2.6 -1,-0.3 1,-0.2 -2,-0.1 0.794 120.7 27.9 -66.2 -19.4 16.5 17.7 -10.6 22 22 A L H X> S+ 0 0 11 -3,-1.9 4,-2.3 -4,-0.4 3,-0.8 0.792 127.1 46.2 -89.8 -45.3 12.8 17.1 -9.7 23 23 A K H 3X S+ 0 0 35 -4,-2.8 4,-2.2 1,-0.3 5,-0.3 0.950 109.9 50.6 -67.3 -53.1 13.0 13.2 -9.7 24 24 A E H 3< S+ 0 0 84 -4,-2.2 -1,-0.3 1,-0.2 -3,-0.1 0.337 113.0 52.7 -68.6 -0.1 16.2 12.9 -7.5 25 25 A K H X> S+ 0 0 60 -3,-0.8 4,-2.7 -5,-0.3 3,-0.7 0.779 106.7 47.2 -87.2 -59.1 14.3 15.3 -5.2 26 26 A L H 3X S+ 0 0 0 -4,-2.3 4,-1.5 1,-0.3 -2,-0.2 0.828 117.0 44.5 -59.4 -36.5 11.1 13.4 -4.8 27 27 A E H 3< S+ 0 0 59 -4,-2.2 -1,-0.3 2,-0.2 -3,-0.2 0.783 112.4 52.5 -71.5 -33.0 13.0 10.1 -4.1 28 28 A H H <4 S+ 0 0 145 -3,-0.7 -2,-0.2 -5,-0.3 -1,-0.2 0.866 113.7 45.0 -63.9 -41.5 15.4 11.9 -1.7 29 29 A E H < S+ 0 0 53 -4,-2.7 -2,-0.2 1,-0.2 -3,-0.2 0.834 132.4 17.3 -68.3 -41.0 12.3 13.3 0.2 30 30 A F S X S- 0 0 22 -4,-1.5 4,-0.7 -5,-0.3 3,-0.4 -0.311 82.2-170.4-135.0 49.2 10.4 9.9 0.3 31 31 A P B 4 -c 34 0A 88 0, 0.0 2,-1.2 0, 0.0 4,-0.1 -0.141 69.9 -8.8 -62.4 138.1 12.9 7.0 -0.5 32 32 A G T 4 S+ 0 0 70 2,-0.5 -29,-0.1 1,-0.2 -5,-0.0 0.007 120.3 80.2 66.3 -26.3 11.4 3.4 -1.0 33 33 A C T 4 S+ 0 0 52 -2,-1.2 -30,-0.7 -3,-0.4 2,-0.3 0.637 103.2 34.0 -69.0 -16.9 8.0 4.7 0.0 34 34 A L E < -ac 3 31A 12 -4,-0.7 -2,-0.5 -32,-0.2 2,-0.3 -0.952 61.1-157.1-143.3 159.6 7.8 6.0 -3.5 35 35 A D E -a 4 0A 53 -32,-2.8 -30,-1.4 -2,-0.3 2,-0.3 -0.946 5.7-167.9-127.7 150.4 8.7 5.6 -7.2 36 36 A I E +a 5 0A 4 -2,-0.3 -30,-0.2 -32,-0.2 2,-0.2 -0.963 16.1 162.3-137.7 133.3 8.9 8.1 -10.1 37 37 A C E -a 6 0A 60 -32,-2.6 -30,-0.9 -2,-0.3 2,-0.3 -0.705 26.3-131.9-130.9-179.1 9.2 7.1 -13.8 38 38 A G E -a 7 0A 37 -32,-0.2 -30,-0.2 -2,-0.2 2,-0.1 -0.981 13.1-176.3-150.6 135.7 8.8 8.8 -17.2 39 39 A E - 0 0 106 -32,-1.0 2,-1.5 -2,-0.3 -31,-0.1 -0.496 15.4-174.1-135.1 47.5 6.9 7.5 -20.3 40 40 A G - 0 0 43 -33,-0.2 -29,-0.3 -32,-0.2 -32,-0.1 -0.384 6.6-163.5 -68.2 82.1 7.6 10.2 -22.9 41 41 A T - 0 0 66 -2,-1.5 -30,-0.1 1,-0.1 -2,-0.0 -0.301 13.6-129.2 -56.0 142.4 5.5 9.4 -26.0 42 42 A P S S+ 0 0 104 0, 0.0 2,-2.2 0, 0.0 3,-0.1 -0.102 87.0 50.2 -75.2-173.2 6.4 11.0 -29.4 43 43 A Q S S+ 0 0 203 1,-0.1 2,-0.1 -2,-0.0 -33,-0.1 -0.312 96.2 86.0 66.5 -48.0 3.7 12.9 -31.6 44 44 A V + 0 0 73 -2,-2.2 2,-0.3 -35,-0.1 -1,-0.1 -0.440 66.2 179.3 -66.2 149.3 2.7 14.8 -28.5 45 45 A T + 0 0 112 -2,-0.1 3,-0.1 -3,-0.1 -34,-0.0 -0.932 44.2 34.2-148.6 166.5 4.8 18.0 -27.9 46 46 A G S S+ 0 0 40 -2,-0.3 2,-0.1 1,-0.2 -1,-0.1 0.685 91.9 115.8 61.9 26.5 5.4 21.1 -25.7 47 47 A F - 0 0 8 -3,-0.0 -37,-0.5 2,-0.0 -1,-0.2 -0.405 45.7-179.1-125.6-179.6 4.4 19.2 -22.5 48 48 A F - 0 0 6 -39,-0.1 12,-1.1 -2,-0.1 2,-0.6 -0.243 24.2-172.7 177.8 77.1 5.4 17.7 -19.0 49 49 A E E -BD 8 59A 29 -41,-2.5 -41,-2.2 10,-0.2 2,-0.5 -0.795 7.1-156.8-101.7 113.0 2.3 16.0 -17.5 50 50 A V E +BD 7 58A 2 8,-1.7 7,-3.0 -2,-0.6 8,-1.5 -0.807 16.7 169.9-106.7 128.0 2.8 14.9 -13.8 51 51 A T E -BD 6 56A 37 -45,-2.3 -45,-3.0 -2,-0.5 2,-0.4 -0.961 18.7-163.6-133.4 145.3 0.7 12.1 -12.2 52 52 A V E > S-BD 5 55A 14 3,-2.5 3,-1.2 -2,-0.3 -47,-0.2 -0.997 81.9 -16.6-128.6 132.3 0.8 10.0 -9.0 53 53 A A T 3 S- 0 0 51 -49,-3.0 -48,-0.1 -2,-0.4 -1,-0.1 0.803 132.4 -49.0 41.4 39.7 -1.2 6.7 -8.6 54 54 A G T 3 S+ 0 0 63 -50,-0.3 2,-0.4 1,-0.2 -1,-0.3 0.818 116.2 116.7 74.7 31.7 -3.3 7.8 -11.7 55 55 A K E < -D 52 0A 137 -3,-1.2 -3,-2.5 0, 0.0 -1,-0.2 -0.989 63.5-127.1-134.9 113.6 -4.0 11.4 -10.4 56 56 A L E +D 51 0A 117 -2,-0.4 -5,-0.3 -5,-0.3 3,-0.1 -0.432 32.1 166.0 -60.6 137.3 -2.7 14.6 -12.1 57 57 A V E + 0 0 44 -7,-3.0 2,-0.3 1,-0.4 -6,-0.2 0.519 68.8 22.2-121.5 -23.7 -0.7 17.1 -10.0 58 58 A H E -D 50 0A 11 -8,-1.5 -8,-1.7 18,-0.0 -1,-0.4 -0.994 56.1-167.1-148.1 150.4 0.8 19.2 -12.8 59 59 A S E >> +D 49 0A 10 -2,-0.3 5,-2.9 -10,-0.2 4,-0.7 -0.737 14.0 176.8-146.1 93.8 0.0 20.1 -16.4 60 60 A K T 45S+ 0 0 50 -12,-1.1 3,-0.4 -2,-0.3 5,-0.3 0.844 92.3 56.4 -58.2 -31.0 2.5 21.8 -18.7 61 61 A K T 45S+ 0 0 161 1,-0.2 -1,-0.2 2,-0.1 -2,-0.1 0.818 104.4 48.9 -73.2 -35.1 -0.2 21.3 -21.4 62 62 A R T 45S- 0 0 157 -3,-0.3 -1,-0.2 3,-0.1 -2,-0.2 0.518 127.8 -98.6 -76.1 -8.4 -3.0 23.2 -19.5 63 63 A G T <5S+ 0 0 49 -4,-0.7 -3,-0.2 -3,-0.4 -2,-0.1 0.731 84.2 133.3 92.5 28.1 -0.5 26.0 -18.9 64 64 A D < - 0 0 52 -5,-2.9 -4,-0.2 1,-0.3 2,-0.1 0.642 57.8-140.8 -75.3 -13.4 0.6 25.1 -15.3 65 65 A G - 0 0 16 -6,-0.4 -1,-0.3 -5,-0.3 2,-0.2 -0.423 27.1 -73.2 84.9-173.8 4.3 25.6 -16.3 66 66 A Y S S- 0 0 74 -2,-0.1 2,-2.1 -3,-0.1 3,-0.1 -0.316 78.9 -62.1 -83.6-168.3 7.0 23.4 -15.1 67 67 A V S S+ 0 0 48 1,-0.2 6,-0.1 -2,-0.2 -2,-0.1 -0.519 74.7 164.5 -77.4 77.2 8.1 23.8 -11.4 68 68 A D + 0 0 96 -2,-2.1 2,-0.3 4,-0.0 -1,-0.2 0.414 55.1 27.3 -77.9 -9.3 9.0 27.4 -12.2 69 69 A T S >> S- 0 0 88 1,-0.2 4,-2.6 -3,-0.1 3,-0.6 -0.992 80.2-108.3-151.2 161.5 9.2 28.5 -8.6 70 70 A E H 3> S+ 0 0 110 -2,-0.3 4,-3.3 1,-0.3 5,-0.3 0.960 121.3 52.4 -47.2 -56.5 9.8 27.3 -5.0 71 71 A S H 3> S+ 0 0 94 1,-0.2 4,-0.7 2,-0.2 -1,-0.3 0.762 110.2 48.9 -58.8 -29.0 6.1 27.7 -4.3 72 72 A K H <> S+ 0 0 52 -3,-0.6 4,-0.8 2,-0.2 3,-0.3 0.891 113.3 44.5 -80.4 -40.3 5.3 25.6 -7.3 73 73 A F H >X S+ 0 0 43 -4,-2.6 4,-2.2 -3,-0.2 3,-1.2 0.953 108.5 59.3 -62.5 -45.0 7.7 22.8 -6.4 74 74 A R H 3X S+ 0 0 145 -4,-3.3 4,-2.6 1,-0.3 -1,-0.2 0.721 95.0 64.6 -60.7 -24.1 6.4 23.0 -2.8 75 75 A K H 3X S+ 0 0 154 -4,-0.7 4,-2.0 -3,-0.3 -1,-0.3 0.915 108.9 39.5 -55.5 -49.5 2.9 22.2 -4.1 76 76 A L H