==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 15-NOV-06 2NWM . COMPND 2 MOLECULE: VINEXIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.ZHANG,B.YAO,J.WU,Y.SHI . 59 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4728.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 35 59.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 35.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A M 0 0 171 0, 0.0 27,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 54.0 5.3 -8.5 -8.1 2 1 A K - 0 0 111 25,-0.1 26,-1.0 1,-0.1 2,-0.3 0.878 360.0-153.5 61.3 106.6 2.7 -9.2 -5.5 3 2 A A E -A 27 0A 14 24,-0.2 53,-1.2 55,-0.1 2,-0.4 -0.815 9.2-165.3-112.0 152.3 -0.2 -6.7 -5.6 4 3 A A E -AB 26 55A 9 22,-1.3 22,-1.4 -2,-0.3 2,-0.5 -0.997 10.2-146.3-140.4 133.6 -2.6 -5.6 -2.9 5 4 A R E -AB 25 54A 117 49,-0.7 49,-0.9 -2,-0.4 20,-0.2 -0.859 27.0-117.1-102.4 127.9 -5.9 -3.8 -3.1 6 5 A L E + B 0 53A 3 18,-2.8 17,-2.3 -2,-0.5 47,-0.2 -0.304 29.6 178.0 -61.1 140.9 -6.9 -1.3 -0.3 7 6 A K + 0 0 112 45,-0.8 2,-0.3 15,-0.2 -1,-0.1 0.189 64.2 52.1-128.7 12.1 -9.9 -2.2 1.7 8 7 A F S S- 0 0 88 44,-0.4 2,-0.3 12,-0.1 -1,-0.2 -0.936 86.8-109.5-154.5 127.3 -9.9 0.7 4.2 9 8 A D - 0 0 94 -2,-0.3 2,-0.4 12,-0.1 12,-0.2 -0.375 43.3-174.3 -58.3 116.1 -9.8 4.4 3.7 10 9 A F B -F 20 0B 24 10,-1.8 10,-1.0 -2,-0.3 2,-0.5 -0.929 14.8-151.6-119.3 141.6 -6.4 5.6 5.0 11 10 A Q - 0 0 156 -2,-0.4 8,-0.1 8,-0.2 2,-0.1 -0.947 22.4-120.6-115.6 125.7 -5.1 9.1 5.3 12 11 A A + 0 0 28 -2,-0.5 7,-0.1 1,-0.2 36,-0.1 -0.391 27.2 179.8 -63.5 132.2 -1.4 9.9 5.0 13 12 A Q + 0 0 151 -2,-0.1 -1,-0.2 5,-0.1 6,-0.0 0.745 65.2 52.5-102.5 -34.4 0.1 11.5 8.2 14 13 A S S > S- 0 0 52 1,-0.1 3,-0.9 4,-0.0 -1,-0.1 -0.746 86.8-116.8-105.1 153.1 3.7 12.0 7.1 15 14 A P T 3 S+ 0 0 126 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 0.782 119.0 51.7 -55.5 -28.0 5.0 13.7 3.9 16 15 A K T 3 S+ 0 0 101 2,-0.1 31,-0.5 30,-0.1 -4,-0.0 0.780 96.8 85.0 -80.1 -28.9 6.4 10.3 2.9 17 16 A E B < S-c 47 0A 6 -3,-0.9 2,-0.4 29,-0.2 31,-0.1 -0.269 71.8-138.3 -71.4 160.6 3.1 8.5 3.4 18 17 A L - 0 0 49 29,-1.1 2,-0.5 -7,-0.1 -5,-0.1 -0.978 6.3-134.1-126.7 136.0 0.4 8.4 0.7 19 18 A T + 0 0 84 -2,-0.4 2,-0.3 -8,-0.1 -8,-0.2 -0.767 34.8 160.8 -91.1 124.4 -3.4 8.8 1.1 20 19 A L B -F 10 0B 11 -10,-1.0 -10,-1.8 -2,-0.5 2,-0.2 -0.995 26.2-141.8-146.1 137.2 -5.5 6.2 -0.8 21 20 A Q > - 0 0 129 -2,-0.3 3,-1.5 -12,-0.2 -15,-0.2 -0.500 45.1 -68.1 -94.1 165.1 -9.1 5.1 -0.4 22 21 A K T 3 S+ 0 0 107 1,-0.2 -15,-0.2 -2,-0.2 -1,-0.2 -0.042 118.0 40.7 -47.8 151.2 -10.5 1.6 -0.8 23 22 A G T 3 S+ 0 0 52 -17,-2.3 2,-0.4 1,-0.3 -1,-0.2 0.215 83.7 126.9 91.5 -15.6 -10.4 0.1 -4.3 24 23 A D < - 0 0 81 -3,-1.5 -18,-2.8 -19,-0.0 2,-0.4 -0.618 43.8-159.4 -80.1 131.2 -7.0 1.5 -4.9 25 24 A I E -A 5 0A 51 -2,-0.4 2,-0.3 -20,-0.2 -20,-0.2 -0.926 10.7-179.0-114.9 135.0 -4.4 -1.0 -6.1 26 25 A V E -A 4 0A 14 -22,-1.4 -22,-1.3 -2,-0.4 2,-0.8 -0.926 29.5-119.1-131.2 155.9 -0.6 -0.5 -5.9 27 26 A Y E -AD 3 40A 140 13,-0.8 13,-1.3 -2,-0.3 2,-0.3 -0.828 29.7-155.7 -98.4 105.4 2.5 -2.5 -6.9 28 27 A I E - D 0 39A 11 -26,-1.0 11,-0.2 -2,-0.8 3,-0.1 -0.585 11.4-169.8 -81.5 139.7 4.6 -3.3 -3.8 29 28 A H E S+ 0 0 139 9,-1.1 2,-0.3 1,-0.3 -1,-0.1 0.908 70.8 10.8 -91.7 -56.8 8.3 -4.0 -4.2 30 29 A K E S- D 0 38A 87 8,-0.6 8,-1.0 2,-0.0 2,-0.8 -0.954 70.4-127.3-127.8 146.3 9.4 -5.3 -0.8 31 30 A E - 0 0 131 -2,-0.3 2,-1.1 6,-0.1 6,-0.1 -0.822 17.6-164.0 -97.0 110.6 7.3 -6.4 2.2 32 31 A V >> - 0 0 43 -2,-0.8 4,-1.7 4,-0.2 3,-1.5 -0.767 6.1-174.0 -96.2 94.0 8.5 -4.7 5.4 33 32 A D T 34 + 0 0 156 -2,-1.1 -1,-0.2 1,-0.3 4,-0.1 0.580 65.7 98.1 -62.7 -9.2 6.9 -6.8 8.2 34 33 A K T 34 S- 0 0 139 2,-0.2 -1,-0.3 1,-0.1 3,-0.1 0.715 118.3 -85.5 -52.3 -20.3 8.2 -4.1 10.6 35 34 A N T <4 S+ 0 0 105 -3,-1.5 2,-0.3 1,-0.1 16,-0.2 0.544 107.8 82.7 119.2 24.6 4.6 -2.8 10.3 36 35 A W < - 0 0 63 -4,-1.7 2,-0.3 13,-0.2 -2,-0.2 -0.835 62.2-149.0-159.0 115.2 4.9 -0.6 7.2 37 36 A L E - E 0 48A 21 11,-2.0 11,-1.2 -2,-0.3 2,-0.6 -0.660 13.3-140.8 -87.8 139.8 4.7 -1.7 3.6 38 37 A E E +DE 30 47A 73 -8,-1.0 -9,-1.1 -2,-0.3 -8,-0.6 -0.885 32.4 157.3-104.8 121.9 6.6 0.1 0.9 39 38 A G E -DE 28 46A 3 7,-0.7 7,-2.4 -2,-0.6 2,-0.3 -0.951 23.5-155.6-140.9 160.4 4.9 0.7 -2.4 40 39 A E E +DE 27 45A 108 -13,-1.3 -13,-0.8 -2,-0.3 2,-0.3 -0.993 9.9 178.8-138.6 144.5 5.1 3.0 -5.5 41 40 A H E > - E 0 44A 89 3,-4.0 3,-2.3 -2,-0.3 -15,-0.1 -0.981 68.1 -4.2-149.5 134.0 2.5 4.0 -8.1 42 41 A H T 3 S- 0 0 185 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 0.852 129.4 -55.3 54.6 37.7 2.7 6.3 -11.1 43 42 A G T 3 S+ 0 0 69 1,-0.3 2,-0.4 0, 0.0 -1,-0.3 0.309 119.8 110.7 80.7 -11.0 6.2 7.4 -10.1 44 43 A R E < - E 0 41A 140 -3,-2.3 -3,-4.0 2,-0.0 2,-0.5 -0.792 63.9-135.0-100.7 141.0 4.9 8.3 -6.7 45 44 A L E - E 0 40A 56 -2,-0.4 2,-0.4 -5,-0.3 -5,-0.3 -0.816 22.8-178.5 -97.7 128.5 5.8 6.4 -3.5 46 45 A G E - E 0 39A 8 -7,-2.4 -7,-0.7 -2,-0.5 2,-0.3 -0.971 0.8-176.7-131.6 119.9 3.1 5.6 -1.0 47 46 A I E +cE 17 38A 6 -31,-0.5 -29,-1.1 -2,-0.4 -9,-0.2 -0.883 10.0 156.6-116.7 147.4 3.6 3.8 2.2 48 47 A F E - E 0 37A 4 -11,-1.2 -11,-2.0 -2,-0.3 4,-0.1 -0.982 48.9 -67.1-160.5 159.7 1.1 2.7 4.9 49 48 A P > - 0 0 28 0, 0.0 3,-1.5 0, 0.0 -13,-0.2 -0.201 38.0-131.5 -53.3 138.2 0.6 0.1 7.7 50 49 A A G > S+ 0 0 47 1,-0.3 3,-0.8 -18,-0.2 -14,-0.1 0.636 104.6 69.5 -66.8 -13.4 0.4 -3.5 6.5 51 50 A N G 3 S+ 0 0 155 1,-0.2 -1,-0.3 -16,-0.2 3,-0.1 0.228 87.8 66.2 -89.1 14.4 -2.7 -3.8 8.7 52 51 A Y G < S+ 0 0 78 -3,-1.5 -45,-0.8 -4,-0.1 -44,-0.4 0.174 102.2 43.4-118.0 14.4 -4.7 -1.5 6.4 53 52 A V E < S-B 6 0A 22 -3,-0.8 2,-0.4 -47,-0.2 -47,-0.2 -0.988 71.0-127.0-155.2 158.7 -4.7 -3.8 3.3 54 53 A E E -B 5 0A 115 -49,-0.9 -49,-0.7 -2,-0.3 2,-0.4 -0.923 27.3-117.8-114.9 136.3 -5.2 -7.5 2.3 55 54 A V E +B 4 0A 116 -2,-0.4 -51,-0.2 -51,-0.2 -53,-0.0 -0.563 57.9 129.6 -73.2 122.7 -2.8 -9.6 0.3 56 55 A L - 0 0 58 -53,-1.2 2,-0.3 -2,-0.4 -51,-0.1 -0.254 45.3-147.7-173.8 73.3 -4.4 -10.7 -3.0 57 56 A P - 0 0 72 0, 0.0 -53,-0.1 0, 0.0 -2,-0.1 -0.289 25.1-160.8 -52.4 107.0 -2.4 -10.1 -6.2 58 57 A L 0 0 78 -2,-0.3 -55,-0.1 1,-0.1 -56,-0.1 -0.169 360.0 360.0 -82.7-179.3 -5.1 -9.5 -8.8 59 58 A E 0 0 242 -2,-0.0 -1,-0.1 -56,-0.0 0, 0.0 -0.524 360.0 360.0 -77.9 360.0 -4.8 -9.7 -12.6