==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-JAN-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CHAPERONE 13-JUL-10 3NX6 . COMPND 2 MOLECULE: 10KDA CHAPERONIN; . SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS ORYZAE PV. ORYZAE; . AUTHOR S.NATARAJAN,T.T.N.DOAN,L.-W.KANG . 75 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4893.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 62.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 31 41.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A S 0 0 152 0, 0.0 57,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -54.1 10.8 33.7 5.7 2 3 A I - 0 0 47 1,-0.1 8,-0.1 21,-0.0 56,-0.0 0.015 360.0-158.6 -34.3 119.8 13.8 36.1 4.9 3 4 A K - 0 0 165 20,-0.1 -1,-0.1 22,-0.0 22,-0.1 -0.897 10.6-144.2-112.5 105.0 15.0 38.1 7.8 4 5 A P - 0 0 14 0, 0.0 22,-0.4 0, 0.0 2,-0.3 -0.308 13.5-141.1 -68.9 149.1 16.9 41.4 6.9 5 6 A L > - 0 0 96 20,-0.2 3,-2.5 21,-0.1 20,-0.3 -0.736 53.9 -20.3-104.8 155.2 19.7 42.5 8.9 6 7 A H T 3 S- 0 0 87 21,-0.3 21,-2.3 -2,-0.3 22,-0.3 -0.266 129.4 -16.8 58.7-122.1 21.0 45.9 10.0 7 8 A D T 3 S+ 0 0 29 20,-0.3 61,-2.4 19,-0.1 -1,-0.3 0.111 100.7 126.8-107.4 21.3 19.5 48.6 7.7 8 9 A R E < -A 67 0A 92 -3,-2.5 17,-1.8 59,-0.2 2,-0.4 -0.414 41.9-160.3 -71.5 149.2 18.4 46.2 4.9 9 10 A V E -AB 66 24A 2 57,-2.7 57,-2.5 15,-0.2 2,-0.5 -0.995 11.2-142.1-137.4 131.4 14.8 46.4 3.7 10 11 A V E -AB 65 23A 0 13,-2.3 12,-2.9 -2,-0.4 13,-1.6 -0.838 24.3-174.4 -97.2 127.5 12.8 43.8 1.8 11 12 A V E -AB 64 21A 0 53,-2.2 53,-2.1 -2,-0.5 10,-0.2 -0.905 20.3-145.2-122.3 139.2 10.4 45.3 -0.8 12 13 A K E - B 0 20A 81 8,-2.7 8,-2.4 -2,-0.3 51,-0.2 -0.919 30.1-123.9-104.4 121.2 7.8 43.6 -3.0 13 14 A P E B 0 19A 36 0, 0.0 6,-0.3 0, 0.0 49,-0.1 -0.362 360.0 360.0 -69.2 148.5 7.7 45.3 -6.3 14 15 A I 0 0 116 4,-1.9 4,-0.4 -2,-0.0 31,-0.0 -0.592 360.0 360.0-160.4 360.0 4.2 46.6 -7.2 15 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 16 35 A S 0 0 114 0, 0.0 2,-0.3 0, 0.0 33,-0.3 0.000 360.0 360.0 360.0 142.9 13.1 53.7 -10.5 17 36 A T E - C 0 48A 31 31,-2.5 31,-2.1 2,-0.0 2,-0.2 -0.912 360.0-120.2-138.1 154.6 10.2 51.4 -9.5 18 37 A K E + C 0 47A 149 -4,-0.4 -4,-1.9 -2,-0.3 2,-0.3 -0.660 39.0 152.9 -95.5 162.8 7.5 51.4 -6.8 19 38 A G E -BC 13 46A 0 27,-1.6 27,-2.6 -6,-0.3 2,-0.4 -0.977 37.1-105.9-175.7 165.4 7.1 48.7 -4.2 20 39 A E E -BC 12 45A 81 -8,-2.4 -8,-2.7 -2,-0.3 2,-0.5 -0.940 31.8-112.6-113.2 148.5 5.9 47.9 -0.7 21 40 A V E +B 11 0A 0 23,-3.2 22,-2.6 -2,-0.4 -10,-0.2 -0.617 36.6 168.2 -83.5 124.2 8.0 47.2 2.4 22 41 A V E + 0 0 54 -12,-2.9 2,-0.3 -2,-0.5 -11,-0.2 0.693 64.9 7.4-108.6 -31.8 7.5 43.7 3.5 23 42 A A E -B 10 0A 19 -13,-1.6 -13,-2.3 18,-0.1 2,-0.3 -0.986 60.3-158.3-154.3 152.8 10.4 43.4 6.1 24 43 A I E -B 9 0A 62 -2,-0.3 -15,-0.2 -15,-0.2 -18,-0.1 -0.952 21.4-114.0-133.2 146.5 12.9 45.6 7.9 25 44 A G - 0 0 3 -17,-1.8 -20,-0.2 -2,-0.3 3,-0.1 -0.409 30.6-111.6 -70.2 156.7 16.1 45.2 9.6 26 45 A A S S- 0 0 80 -22,-0.4 -19,-0.1 1,-0.2 -1,-0.1 0.665 74.8 -84.1 -55.1 -30.1 16.7 45.7 13.4 27 46 A G - 0 0 1 -21,-2.3 -21,-0.3 10,-0.1 -20,-0.3 -0.202 44.5 -73.2 131.6 142.5 18.8 48.7 12.5 28 47 A K E -F 36 0B 93 8,-0.7 8,-3.5 -22,-0.3 2,-0.1 -0.519 55.8-117.4 -65.4 129.9 22.4 49.5 11.6 29 48 A P E -F 35 0B 56 0, 0.0 2,-0.3 0, 0.0 6,-0.3 -0.381 29.1-140.6 -65.4 143.9 24.6 49.2 14.7 30 49 A L > - 0 0 64 4,-3.9 3,-2.1 1,-0.1 4,-0.3 -0.789 17.9-118.7-110.7 151.7 26.3 52.3 15.8 31 50 A D T 3 S+ 0 0 171 -2,-0.3 -1,-0.1 1,-0.3 0, 0.0 0.909 113.1 59.1 -40.2 -52.3 29.8 52.9 17.2 32 51 A N T 3 S- 0 0 118 1,-0.1 -1,-0.3 -3,-0.0 3,-0.1 0.151 126.5 -95.1 -77.2 16.1 28.4 54.2 20.4 33 52 A G S < S+ 0 0 73 -3,-2.1 2,-0.3 1,-0.2 -2,-0.2 0.745 89.4 99.9 79.5 25.1 26.6 50.9 21.1 34 53 A S - 0 0 53 -4,-0.3 -4,-3.9 -6,-0.1 2,-0.5 -0.789 67.7-109.7-128.4 176.0 23.1 51.6 19.7 35 54 A L E -F 29 0B 98 -6,-0.3 2,-0.7 -2,-0.3 -7,-0.1 -0.947 25.4-121.9-111.5 130.7 21.1 50.8 16.6 36 55 A H E -F 28 0B 99 -8,-3.5 -8,-0.7 -2,-0.5 0, 0.0 -0.555 36.7-127.2 -58.5 108.9 20.1 53.3 14.0 37 56 A A - 0 0 69 -2,-0.7 -10,-0.1 -10,-0.2 -11,-0.1 -0.431 25.3-110.4 -66.4 134.4 16.4 53.0 14.0 38 57 A P - 0 0 39 0, 0.0 -1,-0.1 0, 0.0 -31,-0.0 -0.232 13.5-146.8 -59.0 151.3 14.9 52.4 10.5 39 58 A V S S+ 0 0 109 2,-0.0 2,-0.3 0, 0.0 -2,-0.0 0.180 77.8 65.8-109.9 13.5 12.9 55.2 8.9 40 59 A V - 0 0 10 4,-0.0 2,-0.3 6,-0.0 28,-0.0 -0.970 65.4-156.9-130.1 162.3 10.6 52.9 7.1 41 60 A K > - 0 0 136 -2,-0.3 3,-2.3 -17,-0.0 -20,-0.3 -0.873 35.0 -82.5-133.6 152.4 8.0 50.4 8.3 42 61 A V T 3 S+ 0 0 86 -2,-0.3 -20,-0.2 1,-0.3 3,-0.1 -0.449 117.2 34.0 -57.1 127.4 6.4 47.4 7.0 43 62 A G T 3 S+ 0 0 34 -22,-2.6 -1,-0.3 1,-0.4 -21,-0.1 0.068 84.4 133.4 113.2 -17.1 3.5 48.4 4.9 44 63 A D < - 0 0 10 -3,-2.3 -23,-3.2 -24,-0.1 -1,-0.4 -0.414 52.5-137.8 -67.2 136.9 5.2 51.6 3.5 45 64 A K E +C 20 0A 103 31,-2.3 30,-2.5 -25,-0.3 31,-1.2 -0.852 35.6 178.8 -88.6 138.3 4.9 52.1 -0.2 46 65 A V E -CD 19 74A 1 -27,-2.6 -27,-1.6 -2,-0.4 2,-0.4 -0.882 28.5-133.0-140.2 157.2 8.3 53.3 -1.5 47 66 A I E +CD 18 73A 47 26,-2.0 25,-2.4 -2,-0.3 26,-1.0 -0.959 32.0 162.1-117.3 144.0 10.2 54.3 -4.6 48 67 A Y E -CD 17 71A 0 -31,-2.1 -31,-2.5 -2,-0.4 2,-0.2 -0.924 46.9 -72.2-149.2 168.1 13.7 52.9 -5.3 49 68 A G > - 0 0 26 21,-0.8 3,-2.2 -2,-0.3 21,-0.0 -0.475 43.4-122.8 -72.4 137.3 16.0 52.6 -8.2 50 69 A Q T 3 S+ 0 0 74 1,-0.3 -1,-0.1 -2,-0.2 -32,-0.0 0.848 111.6 32.8 -53.0 -36.0 14.9 50.0 -10.6 51 70 A Y T 3 S+ 0 0 210 -34,-0.0 -1,-0.3 3,-0.0 2,-0.2 0.017 88.0 127.7-114.1 27.6 18.3 48.1 -10.2 52 71 A A < - 0 0 15 -3,-2.2 13,-0.1 18,-0.1 -4,-0.0 -0.543 67.1 -10.3 -71.1 140.8 19.1 48.9 -6.5 53 72 A G S S- 0 0 40 -2,-0.2 2,-0.4 11,-0.1 13,-0.2 -0.001 94.4 -51.7 67.9-166.9 19.9 46.0 -4.2 54 73 A S E -E 65 0A 80 11,-2.5 11,-3.1 2,-0.0 2,-0.2 -0.865 42.0-132.4-116.5 147.3 19.6 42.3 -4.8 55 74 A S E +E 64 0A 58 -2,-0.4 2,-0.3 9,-0.2 9,-0.2 -0.537 23.7 175.2 -86.3 154.9 16.7 40.2 -5.9 56 75 A Y E -E 63 0A 58 7,-2.3 7,-2.2 -2,-0.2 2,-0.2 -0.794 17.2-144.4-159.5 131.1 15.6 37.0 -4.2 57 76 A K E +E 62 0A 157 -2,-0.3 2,-0.3 5,-0.2 5,-0.3 -0.627 15.6 180.0 -97.9 150.0 12.5 34.9 -5.1 58 77 A S E > S-E 61 0A 25 3,-2.7 3,-1.6 -2,-0.2 -2,-0.0 -0.880 72.5 -9.8-156.8 118.8 10.3 33.0 -2.7 59 78 A E T 3 S- 0 0 184 -2,-0.3 3,-0.1 1,-0.3 -1,-0.1 0.841 130.0 -58.3 61.8 35.2 7.3 30.9 -3.4 60 79 A G T 3 S+ 0 0 73 1,-0.2 2,-0.5 0, 0.0 -1,-0.3 0.591 113.4 121.7 65.6 9.4 7.7 32.4 -6.9 61 80 A V E < - E 0 58A 40 -3,-1.6 -3,-2.7 -5,-0.0 2,-0.5 -0.899 58.3-137.7 -95.3 134.4 7.3 36.0 -5.6 62 81 A E E - E 0 57A 98 -2,-0.5 2,-0.3 -5,-0.3 -5,-0.2 -0.837 25.7-177.5 -94.4 128.1 10.4 38.1 -6.5 63 82 A Y E - E 0 56A 37 -7,-2.2 -7,-2.3 -2,-0.5 2,-0.4 -0.806 18.6-136.1-115.4 162.1 11.6 40.5 -3.8 64 83 A K E -AE 11 55A 18 -53,-2.1 -53,-2.2 -2,-0.3 2,-0.6 -0.957 4.1-154.0-114.6 134.3 14.3 43.1 -3.5 65 84 A V E +AE 10 54A 30 -11,-3.1 -11,-2.5 -2,-0.4 2,-0.3 -0.971 30.1 171.1-106.1 114.2 16.7 43.4 -0.6 66 85 A L E -A 9 0A 0 -57,-2.5 -57,-2.7 -2,-0.6 2,-0.3 -0.817 37.6-113.0-111.6 157.9 17.8 47.1 -0.5 67 86 A R E >> -A 8 0A 87 -2,-0.3 3,-2.4 -59,-0.2 4,-0.5 -0.727 36.8-114.4 -76.6 143.6 19.8 49.2 1.8 68 87 A E G >4 S+ 0 0 31 -61,-2.4 3,-2.0 -2,-0.3 -1,-0.1 0.907 118.1 65.0 -43.2 -35.3 17.6 51.9 3.3 69 88 A D G 34 S+ 0 0 147 1,-0.3 -1,-0.3 -62,-0.1 -61,-0.1 0.756 91.0 62.8 -67.2 -19.7 19.8 54.4 1.4 70 89 A D G <4 S+ 0 0 45 -3,-2.4 -21,-0.8 -22,-0.0 2,-0.6 0.623 84.3 93.1 -70.8 -17.0 18.5 52.9 -1.9 71 90 A I E << -D 48 0A 23 -3,-2.0 -23,-0.2 -4,-0.5 3,-0.1 -0.695 55.3-171.6 -89.8 116.3 15.0 54.1 -1.0 72 91 A L E - 0 0 107 -25,-2.4 2,-0.3 -2,-0.6 -1,-0.2 0.905 60.5 -10.2 -69.0 -45.4 14.2 57.4 -2.5 73 92 A A E -D 47 0A 35 -26,-1.0 -26,-2.0 0, 0.0 2,-0.5 -0.996 53.8-122.4-160.7 139.1 10.9 58.3 -0.9 74 93 A V E -D 46 0A 73 -2,-0.3 -28,-0.2 -28,-0.2 -30,-0.0 -0.888 25.4-176.2 -84.8 130.1 8.0 57.0 1.2 75 94 A I 0 0 95 -30,-2.5 -29,-0.2 -2,-0.5 -1,-0.1 0.754 360.0 360.0 -99.3 -40.8 4.8 57.5 -0.9 76 95 A G 0 0 47 -31,-1.2 -31,-2.3 -33,-0.0 -1,-0.3 -0.958 360.0 360.0 177.6 360.0 2.3 56.3 1.7