==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=8-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 12-FEB-03 1NY9 . COMPND 2 MOLECULE: TRANSCRIPTIONAL ACTIVATOR TIPA-S; . SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES LIVIDANS; . AUTHOR J.D.KAHMANN,H.J.SASS,M.G.ALLAN,H.SETO,C.J.THOMPSON, . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6892.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 74 78.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 58 61.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 160 A W 0 0 261 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -33.6 -15.5 9.3 11.4 2 161 A Q + 0 0 195 1,-0.2 2,-1.4 2,-0.0 0, 0.0 0.512 360.0 128.6 60.1 -2.5 -13.0 12.0 10.2 3 162 A R > + 0 0 151 1,-0.2 4,-0.8 2,-0.1 -1,-0.2 -0.633 29.1 170.9 -86.0 89.6 -10.3 9.3 11.2 4 163 A I T 4 S+ 0 0 120 -2,-1.4 -1,-0.2 1,-0.2 4,-0.1 0.109 71.3 60.6 -86.2 26.8 -8.2 9.2 8.0 5 164 A Q T > S+ 0 0 128 2,-0.1 4,-1.9 3,-0.1 3,-0.2 0.715 94.2 53.1-116.5 -49.9 -5.7 7.0 9.9 6 165 A D H > S+ 0 0 96 1,-0.2 4,-1.6 2,-0.2 -2,-0.1 0.868 104.4 61.2 -57.6 -34.3 -7.5 3.9 10.9 7 166 A E H >X S+ 0 0 98 -4,-0.8 4,-1.0 1,-0.2 3,-0.5 0.958 103.7 47.2 -61.2 -46.4 -8.6 3.4 7.3 8 167 A A H >> S+ 0 0 61 1,-0.2 4,-1.5 2,-0.2 3,-0.8 0.917 107.1 58.7 -60.9 -39.7 -5.0 3.1 6.1 9 168 A D H 3X S+ 0 0 96 -4,-1.9 4,-1.8 1,-0.2 -1,-0.2 0.872 97.2 60.9 -61.3 -30.3 -4.4 0.6 8.9 10 169 A E H S+ 0 0 11 -4,-1.3 5,-1.8 -3,-0.4 4,-1.3 0.944 104.8 52.9 -64.0 -43.4 -2.3 -11.6 1.7 19 178 A M H <5S+ 0 0 43 -4,-1.8 3,-0.4 1,-0.2 -1,-0.2 0.921 101.2 60.7 -56.9 -42.9 1.1 -12.4 3.0 20 179 A D H <5S+ 0 0 139 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.948 111.6 38.3 -53.5 -44.4 -0.4 -14.8 5.5 21 180 A A H <5S- 0 0 72 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.2 0.670 107.0-134.7 -76.8 -15.6 -1.8 -16.8 2.5 22 181 A G T <5 + 0 0 57 -4,-1.3 -3,-0.2 -3,-0.4 -2,-0.1 0.935 41.2 175.8 61.0 42.6 1.5 -16.0 0.7 23 182 A E < - 0 0 55 -5,-1.8 2,-0.4 1,-0.1 -1,-0.1 -0.297 42.1 -87.5 -72.1 167.5 -0.5 -15.1 -2.4 24 183 A P > - 0 0 86 0, 0.0 3,-3.4 0, 0.0 6,-0.2 -0.609 30.9-132.7 -75.9 122.8 1.2 -13.8 -5.5 25 184 A A T 3 S+ 0 0 14 -2,-0.4 63,-0.1 1,-0.3 -2,-0.1 0.762 111.2 64.0 -51.7 -15.7 1.4 -10.0 -5.1 26 185 A D T 3 S+ 0 0 97 4,-0.1 -1,-0.3 61,-0.1 2,-0.3 0.212 76.3 133.8 -91.3 17.1 0.1 -10.1 -8.6 27 186 A S <>> - 0 0 23 -3,-3.4 4,-5.5 1,-0.2 5,-0.6 -0.513 64.1-132.4 -69.9 128.5 -3.1 -11.7 -7.2 28 187 A E H >5S+ 0 0 133 -2,-0.3 4,-3.7 1,-0.3 5,-0.3 0.912 113.8 48.4 -46.0 -43.2 -6.2 -10.1 -8.7 29 188 A G H >5S+ 0 0 47 2,-0.2 4,-1.7 3,-0.2 -1,-0.3 0.961 119.1 38.0 -64.1 -47.3 -7.4 -9.9 -5.1 30 189 A A H >5S+ 0 0 0 -6,-0.2 4,-2.5 2,-0.2 -2,-0.2 0.975 121.8 43.4 -66.5 -53.6 -4.1 -8.5 -4.0 31 190 A M H X5S+ 0 0 3 -4,-5.5 4,-3.0 2,-0.3 -3,-0.2 0.933 111.0 55.0 -59.7 -42.5 -3.8 -6.3 -7.1 32 191 A D H XX S+ 0 0 57 -4,-2.8 4,-1.3 -5,-0.3 3,-0.6 0.994 117.1 42.7 -64.7 -59.0 -4.6 7.2 -1.4 42 201 A A H 3< S+ 0 0 12 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.855 109.8 60.0 -55.2 -35.2 -5.6 9.2 -4.4 43 202 A R H 3< S+ 0 0 173 -4,-1.9 -1,-0.2 -5,-0.4 -2,-0.2 0.924 98.3 57.2 -63.7 -39.2 -9.0 9.9 -2.9 44 203 A N H << S- 0 0 86 -4,-1.7 2,-0.3 -3,-0.6 -1,-0.2 0.921 131.6 -18.5 -57.6 -40.5 -7.4 11.6 0.1 45 204 A H S < S+ 0 0 134 -4,-1.3 -1,-0.2 2,-0.1 0, 0.0 -0.989 116.3 11.1-160.2 162.3 -5.7 14.0 -2.3 46 205 A Y S S- 0 0 217 -2,-0.3 2,-0.2 -3,-0.1 3,-0.1 -0.166 73.3-126.5 58.6-158.8 -4.8 14.4 -6.0 47 206 A D + 0 0 107 1,-0.3 -2,-0.1 -3,-0.0 -4,-0.1 -0.548 64.7 14.5-154.0-138.8 -6.4 11.8 -8.3 48 207 A C + 0 0 92 -2,-0.2 -1,-0.3 1,-0.1 4,-0.0 -0.189 67.4 141.1 -47.6 131.8 -5.3 9.2 -11.0 49 208 A G > + 0 0 20 -3,-0.1 4,-2.2 2,-0.1 5,-0.2 -0.116 19.5 168.7-174.9 65.1 -1.5 8.8 -10.6 50 209 A Y H > S+ 0 0 43 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.878 89.0 56.3 -52.8 -33.0 -0.1 5.3 -11.0 51 210 A E H > S+ 0 0 155 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.950 103.2 50.1 -65.0 -48.8 3.2 7.1 -11.1 52 211 A M H > S+ 0 0 132 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.878 108.0 56.6 -60.0 -31.5 2.7 8.8 -7.7 53 212 A H H X S+ 0 0 7 -4,-2.2 4,-1.5 1,-0.2 -1,-0.2 0.942 105.1 50.0 -65.3 -43.0 1.8 5.3 -6.5 54 213 A T H X S+ 0 0 52 -4,-2.0 4,-1.0 1,-0.2 -1,-0.2 0.871 104.3 60.6 -62.4 -34.5 5.2 4.0 -7.7 55 214 A C H >X S+ 0 0 72 -4,-2.0 4,-0.9 1,-0.2 3,-0.8 0.921 101.9 50.8 -61.6 -41.4 6.8 7.0 -5.8 56 215 A L H 3X S+ 0 0 58 -4,-1.6 4,-2.2 1,-0.2 -1,-0.2 0.898 97.0 69.6 -64.3 -35.9 5.4 5.7 -2.5 57 216 A G H 3< S+ 0 0 3 -4,-1.5 5,-0.3 1,-0.2 -1,-0.2 0.884 93.3 59.8 -49.6 -36.2 6.9 2.3 -3.3 58 217 A E H XX S+ 0 0 103 -4,-1.0 4,-6.0 -3,-0.8 3,-2.2 0.978 105.2 44.6 -59.0 -55.6 10.2 4.0 -2.8 59 218 A M H 3< S+ 0 0 79 -4,-0.9 -1,-0.2 1,-0.3 -2,-0.2 0.870 99.9 70.6 -59.8 -31.8 9.5 4.9 0.8 60 219 A Y T 3< S- 0 0 35 -4,-2.2 -1,-0.3 1,-0.2 -2,-0.2 0.636 130.1 -0.0 -60.0 -7.3 8.1 1.4 1.4 61 220 A V T <4 S+ 0 0 55 -3,-2.2 -2,-0.2 -4,-0.2 -1,-0.2 0.433 120.6 77.8-149.1 -35.7 11.8 0.4 1.1 62 221 A S S <>S+ 0 0 30 -4,-6.0 5,-1.0 -5,-0.3 4,-0.2 -0.196 83.2 34.9 -77.0 176.6 13.9 3.5 0.5 63 222 A D T >>5S- 0 0 78 1,-0.2 4,-1.7 3,-0.1 3,-1.4 0.906 77.0-133.2 42.8 92.2 15.0 6.1 3.2 64 223 A E H 3>5S+ 0 0 131 1,-0.3 4,-1.3 2,-0.2 5,-0.2 0.702 101.7 73.5 -48.3 -14.4 15.4 3.9 6.3 65 224 A R H 3>5S+ 0 0 174 2,-0.1 4,-0.8 3,-0.1 -1,-0.3 0.972 108.9 25.5 -67.7 -50.5 13.4 6.6 8.0 66 225 A F H X>5S+ 0 0 79 -3,-1.4 4,-2.5 -4,-0.2 3,-0.7 0.952 120.2 56.2 -78.6 -50.8 10.1 5.5 6.4 67 226 A T H 3X< S+ 0 0 51 -4,-2.5 3,-1.5 1,-0.2 -2,-0.2 0.983 116.3 42.8 -59.7 -61.9 6.1 0.9 7.9 71 230 A D G >< S+ 0 0 40 -4,-2.1 3,-2.0 -5,-0.3 -1,-0.2 0.620 91.5 89.0 -64.4 -10.6 7.7 -2.6 8.2 72 231 A A G 3 S+ 0 0 82 -4,-0.4 -1,-0.3 -5,-0.4 -2,-0.2 0.863 84.8 54.2 -58.1 -32.0 7.7 -2.2 12.0 73 232 A A G < S+ 0 0 72 -3,-1.5 -1,-0.3 -4,-0.4 -2,-0.2 0.542 130.5 1.1 -80.9 -3.2 4.2 -3.7 12.0 74 233 A K S X S- 0 0 83 -3,-2.0 3,-0.8 -4,-0.2 4,-0.4 -0.758 81.9-110.8-179.5 128.1 5.3 -6.8 10.1 75 234 A P T 3 S+ 0 0 108 0, 0.0 -3,-0.1 0, 0.0 -4,-0.0 -0.500 97.4 4.6 -73.9 135.2 8.8 -7.8 8.7 76 235 A G T 3> S+ 0 0 37 -2,-0.3 4,-2.6 1,-0.1 5,-0.3 0.337 90.5 117.1 79.5 -9.4 9.3 -7.8 4.9 77 236 A L H <> S+ 0 0 8 -3,-0.8 4,-3.1 -6,-0.2 5,-0.2 0.924 75.1 56.0 -56.0 -38.0 5.8 -6.3 4.3 78 237 A A H > S+ 0 0 6 -4,-0.4 4,-2.3 1,-0.2 -1,-0.2 0.971 108.4 44.2 -57.2 -56.0 7.7 -3.3 2.8 79 238 A A H > S+ 0 0 55 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.913 115.7 49.0 -57.7 -42.5 9.6 -5.4 0.3 80 239 A Y H X S+ 0 0 36 -4,-2.6 4,-2.0 2,-0.2 -1,-0.2 0.936 107.4 54.2 -65.0 -45.0 6.4 -7.4 -0.6 81 240 A M H X S+ 0 0 10 -4,-3.1 4,-2.5 -5,-0.3 3,-0.3 0.956 102.0 57.9 -56.5 -46.7 4.4 -4.2 -1.0 82 241 A R H X S+ 0 0 78 -4,-2.3 4,-1.7 1,-0.3 5,-0.3 0.932 106.6 49.8 -49.0 -45.3 6.9 -2.8 -3.5 83 242 A D H X S+ 0 0 78 -4,-1.4 4,-1.7 1,-0.2 -1,-0.3 0.909 109.4 53.1 -60.9 -39.1 6.2 -6.0 -5.6 84 243 A A H X S+ 0 0 2 -4,-2.0 4,-1.8 -3,-0.3 5,-0.3 0.912 106.2 51.5 -61.3 -47.5 2.5 -5.3 -5.2 85 244 A I H X S+ 0 0 5 -4,-2.5 4,-2.8 1,-0.2 5,-0.2 0.956 111.1 44.5 -58.8 -55.6 2.6 -1.7 -6.5 86 245 A L H X S+ 0 0 68 -4,-1.7 4,-4.9 -5,-0.2 5,-0.3 0.904 109.7 55.1 -60.9 -44.0 4.5 -2.4 -9.7 87 246 A A H X S+ 0 0 20 -4,-1.7 4,-2.5 -5,-0.3 5,-0.2 0.981 114.1 40.7 -58.4 -50.3 2.5 -5.4 -10.7 88 247 A N H X S+ 0 0 0 -4,-1.8 4,-0.8 1,-0.2 -1,-0.2 0.951 120.3 45.5 -59.6 -47.1 -0.7 -3.5 -10.5 89 248 A A H >X S+ 0 0 6 -4,-2.8 4,-4.9 -5,-0.3 3,-1.0 0.945 110.8 54.0 -62.4 -47.6 0.9 -0.5 -12.1 90 249 A V H 3< S+ 0 0 68 -4,-4.9 -1,-0.2 1,-0.3 -2,-0.2 0.916 102.4 54.7 -57.2 -44.8 2.6 -2.6 -14.8 91 250 A R H 3< S+ 0 0 97 -4,-2.5 -1,-0.3 -5,-0.3 -2,-0.2 0.802 121.6 34.5 -63.3 -17.6 -0.7 -4.3 -16.0 92 251 A H H << S- 0 0 75 -3,-1.0 -2,-0.3 -4,-0.8 -1,-0.2 0.813 143.5 -5.5 -96.7 -45.0 -1.8 -0.6 -16.4 93 252 A T < 0 0 83 -4,-4.9 -1,-0.2 -7,-0.2 -2,-0.2 -0.798 360.0 360.0-156.6 109.7 1.5 0.9 -17.5 94 253 A P 0 0 166 0, 0.0 -1,-0.1 0, 0.0 -4,-0.1 0.983 360.0 360.0 -78.7 360.0 5.0 -0.9 -17.7