==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-FEB-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 16-JUL-10 3NZL . COMPND 2 MOLECULE: DNA-BINDING PROTEIN SATB1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR F.FOROUHAR,M.ABASHIDZE,J.SEETHARAMAN,A.P.KUZIN,P.PATEL,R.XIA . 73 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4980.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 58.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 49.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 7 A H > 0 0 152 0, 0.0 3,-2.2 0, 0.0 4,-0.3 0.000 360.0 360.0 360.0 138.1 15.5 3.6 37.3 2 8 A H G > + 0 0 51 1,-0.3 3,-1.6 2,-0.2 70,-0.1 0.771 360.0 67.1 -58.3 -27.5 14.7 7.3 36.9 3 9 A S G 3 S+ 0 0 56 1,-0.3 -1,-0.3 69,-0.0 65,-0.0 0.711 92.6 62.6 -70.6 -15.7 18.3 8.1 36.1 4 10 A H G < S+ 0 0 156 -3,-2.2 -1,-0.3 2,-0.1 -2,-0.2 0.515 77.1 111.2 -85.4 -6.7 17.8 6.1 32.8 5 11 A X S < S- 0 0 49 -3,-1.6 -3,-0.0 -4,-0.3 63,-0.0 -0.391 85.9 -88.0 -61.1 143.6 15.2 8.5 31.6 6 12 A L - 0 0 80 1,-0.1 62,-0.1 4,-0.1 -1,-0.1 -0.238 44.3-109.8 -53.6 141.7 16.4 10.6 28.7 7 13 A P > - 0 0 45 0, 0.0 3,-2.2 0, 0.0 4,-0.4 -0.306 38.4 -98.7 -70.6 161.6 18.2 13.8 29.5 8 14 A P G > S+ 0 0 19 0, 0.0 3,-1.8 0, 0.0 56,-0.2 0.821 119.3 59.4 -56.8 -39.1 16.3 17.0 28.7 9 15 A E G 3 S+ 0 0 114 1,-0.3 52,-0.1 52,-0.1 51,-0.0 0.634 100.9 58.2 -67.5 -13.3 18.0 17.7 25.4 10 16 A Q G < S+ 0 0 114 -3,-2.2 2,-0.4 51,-0.1 -1,-0.3 0.511 80.0 110.3 -94.3 -2.4 16.8 14.4 24.0 11 17 A W < + 0 0 19 -3,-1.8 2,-0.2 -4,-0.4 50,-0.1 -0.574 42.6 176.4 -77.0 127.3 13.1 15.0 24.6 12 18 A S > - 0 0 46 -2,-0.4 4,-2.3 48,-0.1 5,-0.2 -0.673 51.1 -91.8-110.4 179.4 11.0 15.5 21.4 13 19 A H H > S+ 0 0 68 1,-0.2 4,-2.5 -2,-0.2 5,-0.2 0.838 129.1 55.6 -60.7 -30.1 7.3 16.0 21.0 14 20 A T H > S+ 0 0 65 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.928 106.3 48.8 -67.6 -43.8 7.0 12.2 20.7 15 21 A T H > S+ 0 0 30 1,-0.2 4,-2.4 2,-0.2 -2,-0.2 0.922 112.3 49.9 -59.5 -44.8 8.8 11.7 24.0 16 22 A V H X S+ 0 0 0 -4,-2.3 4,-2.8 1,-0.2 -2,-0.2 0.940 112.1 45.6 -60.6 -49.3 6.4 14.2 25.6 17 23 A R H X S+ 0 0 50 -4,-2.5 4,-2.2 1,-0.2 -1,-0.2 0.887 112.2 51.5 -67.2 -34.6 3.3 12.7 24.3 18 24 A N H X S+ 0 0 95 -4,-2.4 4,-1.5 2,-0.2 -1,-0.2 0.919 113.4 44.4 -67.9 -42.0 4.4 9.2 25.2 19 25 A A H X S+ 0 0 9 -4,-2.4 4,-2.5 -5,-0.2 -2,-0.2 0.932 111.6 54.5 -62.4 -45.8 5.1 10.2 28.8 20 26 A L H X S+ 0 0 0 -4,-2.8 4,-2.4 1,-0.2 -2,-0.2 0.896 105.5 51.3 -59.0 -41.8 1.9 12.2 29.0 21 27 A K H < S+ 0 0 111 -4,-2.2 4,-0.4 1,-0.2 -1,-0.2 0.894 111.2 47.4 -69.7 -34.6 -0.3 9.3 28.0 22 28 A D H >< S+ 0 0 76 -4,-1.5 3,-1.0 1,-0.2 4,-0.4 0.914 112.7 50.7 -68.6 -38.8 1.3 7.0 30.6 23 29 A L H >X S+ 0 0 6 -4,-2.5 3,-1.7 1,-0.2 4,-0.6 0.892 103.2 59.5 -62.3 -39.7 0.9 9.7 33.3 24 30 A L T 3< S+ 0 0 41 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.575 88.7 72.1 -74.9 -6.4 -2.7 10.2 32.4 25 31 A K T <4 S+ 0 0 164 -3,-1.0 -1,-0.3 -4,-0.4 -2,-0.2 0.788 111.4 29.9 -69.4 -26.6 -3.5 6.6 33.3 26 32 A D T <4 S+ 0 0 143 -3,-1.7 2,-0.3 -4,-0.4 -2,-0.2 0.316 126.8 30.2-118.9 3.4 -3.0 7.5 37.0 27 33 A X S < S- 0 0 45 -4,-0.6 -1,-0.1 4,-0.0 2,-0.1 -0.981 78.5-110.8-153.4 159.8 -4.0 11.1 37.1 28 34 A N > - 0 0 95 -2,-0.3 4,-2.4 1,-0.1 5,-0.2 -0.366 35.3-102.0 -89.0 170.3 -6.4 13.4 35.4 29 35 A Q H > S+ 0 0 74 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.854 120.9 54.1 -60.4 -37.4 -5.6 16.3 33.0 30 36 A S H > S+ 0 0 74 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.930 110.3 46.6 -62.6 -45.3 -6.2 18.9 35.6 31 37 A S H > S+ 0 0 49 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.901 111.0 52.1 -63.2 -42.3 -3.8 17.2 38.0 32 38 A L H X S+ 0 0 0 -4,-2.4 4,-2.6 1,-0.2 -1,-0.2 0.927 107.7 51.7 -61.6 -42.6 -1.2 16.9 35.3 33 39 A A H < S+ 0 0 20 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.880 108.3 52.3 -62.8 -35.1 -1.4 20.6 34.5 34 40 A K H < S+ 0 0 175 -4,-1.7 -1,-0.2 1,-0.2 -2,-0.2 0.891 117.8 38.1 -66.1 -35.7 -0.9 21.4 38.2 35 41 A E H < S+ 0 0 101 -4,-1.9 -2,-0.2 -5,-0.1 -1,-0.2 0.857 112.9 48.4 -80.1 -41.2 2.2 19.3 38.3 36 42 A C S < S- 0 0 13 -4,-2.6 27,-0.1 2,-0.2 26,-0.0 -0.479 81.8-106.7-115.8 172.7 4.0 19.8 35.0 37 43 A P S S+ 0 0 27 0, 0.0 2,-0.3 0, 0.0 26,-0.1 0.485 85.0 100.0 -81.0 -0.7 5.1 22.6 32.7 38 44 A L S S- 0 0 5 -6,-0.2 -2,-0.2 1,-0.1 2,-0.1 -0.659 72.1-124.0 -84.3 143.6 2.5 22.0 30.0 39 45 A S > - 0 0 63 -2,-0.3 4,-2.6 1,-0.1 5,-0.2 -0.295 24.6-107.1 -77.1 163.9 -0.6 24.2 29.9 40 46 A Q H > S+ 0 0 151 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.902 121.7 50.8 -55.0 -42.1 -4.2 23.0 30.1 41 47 A S H > S+ 0 0 93 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.909 109.7 47.8 -67.1 -41.6 -4.5 23.8 26.4 42 48 A X H > S+ 0 0 51 2,-0.2 4,-2.3 1,-0.2 5,-0.2 0.911 111.7 50.7 -67.5 -40.7 -1.4 22.0 25.3 43 49 A I H X S+ 0 0 1 -4,-2.6 4,-2.4 1,-0.2 -2,-0.2 0.940 111.4 48.4 -59.8 -46.6 -2.4 18.9 27.4 44 50 A S H X S+ 0 0 48 -4,-2.4 4,-2.6 -5,-0.2 5,-0.2 0.905 110.4 51.4 -60.9 -42.5 -5.9 18.9 25.8 45 51 A S H X S+ 0 0 60 -4,-2.3 4,-2.7 2,-0.2 -1,-0.2 0.908 109.4 49.3 -62.7 -43.3 -4.4 19.3 22.3 46 52 A I H < S+ 0 0 4 -4,-2.3 -2,-0.2 1,-0.2 -1,-0.2 0.928 114.9 45.5 -62.3 -42.2 -2.1 16.3 22.8 47 53 A V H < S+ 0 0 65 -4,-2.4 -2,-0.2 -5,-0.2 -1,-0.2 0.928 126.3 26.9 -63.9 -43.1 -4.9 14.2 24.1 48 54 A N H < S+ 0 0 110 -4,-2.6 -2,-0.2 -5,-0.2 -3,-0.2 0.731 89.9 101.6-100.2 -28.7 -7.4 15.1 21.4 49 55 A S < - 0 0 48 -4,-2.7 4,-0.1 -5,-0.2 -4,-0.0 -0.268 54.1-150.6 -67.7 149.9 -5.8 16.2 18.1 50 56 A T S S+ 0 0 129 2,-0.1 2,-0.2 0, 0.0 -1,-0.1 0.433 80.9 71.2 -89.4 -0.7 -5.5 13.9 15.1 51 57 A Y S S- 0 0 175 1,-0.1 -2,-0.1 0, 0.0 0, 0.0 -0.738 96.5 -83.4-113.5 162.7 -2.3 15.7 14.1 52 58 A Y - 0 0 166 -2,-0.2 2,-0.3 1,-0.1 -1,-0.1 -0.169 52.8-102.4 -61.3 156.9 1.2 15.7 15.6 53 59 A A - 0 0 8 -4,-0.1 2,-0.8 -7,-0.0 -1,-0.1 -0.661 17.7-139.9 -89.4 134.8 1.9 18.1 18.5 54 60 A N + 0 0 130 -2,-0.3 2,-0.4 -41,-0.1 -8,-0.1 -0.861 36.7 157.6 -91.2 108.7 3.7 21.4 18.2 55 61 A V - 0 0 18 -2,-0.8 -42,-0.2 4,-0.0 -39,-0.0 -0.985 38.0-124.8-133.6 121.6 5.9 21.6 21.2 56 62 A S > - 0 0 66 -2,-0.4 4,-2.7 1,-0.1 5,-0.2 -0.206 23.4-113.6 -62.7 157.3 8.9 23.9 21.2 57 63 A A H > S+ 0 0 72 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.914 118.4 53.7 -55.4 -44.9 12.4 22.5 22.0 58 64 A A H > S+ 0 0 71 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.915 110.7 45.5 -58.4 -43.4 12.5 24.6 25.1 59 65 A K H > S+ 0 0 52 2,-0.2 4,-2.8 1,-0.2 -1,-0.2 0.885 110.2 53.6 -71.3 -37.7 9.2 23.2 26.3 60 66 A C H X S+ 0 0 4 -4,-2.7 4,-2.7 2,-0.2 -1,-0.2 0.927 112.7 45.0 -57.3 -45.7 10.2 19.6 25.5 61 67 A Q H X S+ 0 0 69 -4,-2.4 4,-2.5 2,-0.2 -2,-0.2 0.888 112.0 51.4 -67.0 -41.1 13.3 20.1 27.5 62 68 A E H X S+ 0 0 93 -4,-2.3 4,-2.3 -5,-0.2 -2,-0.2 0.924 112.6 46.8 -59.9 -46.0 11.4 21.7 30.4 63 69 A F H X S+ 0 0 0 -4,-2.8 4,-3.0 2,-0.2 -2,-0.2 0.931 111.4 50.2 -62.8 -46.5 8.9 18.9 30.4 64 70 A G H X S+ 0 0 1 -4,-2.7 4,-2.2 2,-0.2 5,-0.2 0.885 110.5 49.9 -61.6 -39.2 11.7 16.2 30.3 65 71 A R H X S+ 0 0 147 -4,-2.5 4,-2.0 2,-0.2 -1,-0.2 0.938 113.7 46.1 -60.5 -46.5 13.5 17.9 33.2 66 72 A W H X S+ 0 0 36 -4,-2.3 4,-2.9 -5,-0.2 -2,-0.2 0.925 111.9 51.3 -60.2 -46.3 10.3 18.0 35.2 67 73 A Y H X S+ 0 0 28 -4,-3.0 4,-2.5 1,-0.2 5,-0.2 0.916 110.0 46.9 -64.1 -45.1 9.4 14.4 34.3 68 74 A K H X S+ 0 0 56 -4,-2.2 4,-1.9 1,-0.2 -1,-0.2 0.925 115.8 46.2 -63.3 -40.4 12.7 12.9 35.4 69 75 A H H X S+ 0 0 121 -4,-2.0 4,-2.4 -5,-0.2 -2,-0.2 0.884 111.0 53.4 -67.4 -40.0 12.6 14.9 38.6 70 76 A F H < S+ 0 0 56 -4,-2.9 -2,-0.2 1,-0.2 -1,-0.2 0.920 109.3 47.9 -61.5 -43.9 9.0 13.9 39.2 71 77 A K H < S+ 0 0 81 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.871 114.5 46.2 -66.9 -34.0 9.9 10.2 38.8 72 78 A K H < 0 0 131 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.878 360.0 360.0 -68.8 -38.2 12.8 10.6 41.2 73 79 A T < 0 0 139 -4,-2.4 -1,-0.2 -5,-0.1 -2,-0.1 -0.590 360.0 360.0 62.5 360.0 10.7 12.5 43.7