==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 29-NOV-06 2O1K . COMPND 2 MOLECULE: NON-STRUCTURAL GLYCOPROTEIN NSP4; . SOURCE 2 ORGANISM_SCIENTIFIC: SIMIAN ROTAVIRUS A/SA11; . AUTHOR R.DEEPA,K.SUGUNA,C.DURGA RAO . 86 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6886.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 78 90.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 78 90.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 95 A I > 0 0 99 0, 0.0 4,-2.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -30.8 20.2 16.5 95.1 2 96 A E H > + 0 0 160 2,-0.2 4,-1.6 1,-0.2 5,-0.1 0.861 360.0 49.6 -63.4 -36.4 19.3 12.8 95.6 3 97 A K H > S+ 0 0 57 2,-0.2 4,-1.4 1,-0.2 -1,-0.2 0.891 112.1 46.4 -66.5 -42.7 22.6 12.5 97.5 4 98 A Q H > S+ 0 0 24 2,-0.2 4,-2.0 1,-0.2 -2,-0.2 0.787 107.3 58.2 -72.6 -29.4 21.9 15.6 99.6 5 99 A M H X S+ 0 0 92 -4,-2.1 4,-2.3 2,-0.2 -1,-0.2 0.908 105.1 51.0 -61.1 -43.4 18.4 14.2 100.2 6 100 A D H X S+ 0 0 116 -4,-1.6 4,-1.9 1,-0.2 -2,-0.2 0.858 108.4 51.9 -62.6 -37.3 20.0 11.1 101.7 7 101 A R H X S+ 0 0 114 -4,-1.4 4,-2.0 2,-0.2 -1,-0.2 0.901 109.7 49.5 -63.8 -42.3 22.1 13.4 104.0 8 102 A V H X S+ 0 0 16 -4,-2.0 4,-2.1 2,-0.2 -2,-0.2 0.918 110.9 48.6 -62.8 -46.3 19.0 15.2 105.2 9 103 A V H X S+ 0 0 82 -4,-2.3 4,-2.0 1,-0.2 -1,-0.2 0.893 109.9 53.1 -62.1 -41.9 17.1 12.0 106.0 10 104 A K H X S+ 0 0 35 -4,-1.9 4,-1.8 1,-0.2 -1,-0.2 0.917 110.0 46.9 -59.7 -46.9 20.2 10.6 107.9 11 105 A E H X S+ 0 0 2 -4,-2.0 4,-2.2 1,-0.2 -1,-0.2 0.875 110.3 53.6 -65.5 -37.3 20.4 13.7 110.1 12 106 A M H X S+ 0 0 102 -4,-2.1 4,-2.1 2,-0.2 -1,-0.2 0.855 106.5 51.1 -67.8 -35.5 16.7 13.7 110.8 13 107 A R H X S+ 0 0 55 -4,-2.0 4,-1.9 2,-0.2 -1,-0.2 0.911 110.6 49.9 -65.5 -40.8 16.8 10.0 112.0 14 108 A R H X S+ 0 0 121 -4,-1.8 4,-1.9 1,-0.2 -2,-0.2 0.897 110.2 50.7 -61.7 -42.9 19.7 11.0 114.3 15 109 A Q H X S+ 0 0 53 -4,-2.2 4,-2.9 2,-0.2 5,-0.3 0.906 107.2 53.5 -62.2 -43.6 17.7 13.9 115.7 16 110 A L H X S+ 0 0 124 -4,-2.1 4,-2.6 1,-0.2 -1,-0.2 0.917 108.9 49.2 -57.8 -46.0 14.6 11.8 116.3 17 111 A E H X S+ 0 0 136 -4,-1.9 4,-2.0 1,-0.2 -1,-0.2 0.882 112.7 47.4 -61.4 -42.0 16.7 9.3 118.4 18 112 A M H X S+ 0 0 47 -4,-1.9 4,-2.1 2,-0.2 -2,-0.2 0.901 112.8 47.8 -69.7 -39.8 18.3 12.2 120.4 19 113 A I H X S+ 0 0 67 -4,-2.9 4,-2.2 2,-0.2 -2,-0.2 0.907 109.6 54.4 -66.1 -39.4 14.9 13.8 121.1 20 114 A D H X S+ 0 0 106 -4,-2.6 4,-1.9 -5,-0.3 -2,-0.2 0.934 108.5 48.4 -59.5 -44.1 13.4 10.5 122.1 21 115 A K H X S+ 0 0 83 -4,-2.0 4,-2.1 1,-0.2 -1,-0.2 0.862 107.5 55.2 -66.4 -36.6 16.2 10.0 124.6 22 116 A L H X S+ 0 0 30 -4,-2.1 4,-2.0 1,-0.2 -1,-0.2 0.915 107.6 51.2 -58.0 -40.8 15.6 13.6 126.0 23 117 A T H X S+ 0 0 76 -4,-2.2 4,-1.5 2,-0.2 -2,-0.2 0.907 109.3 47.9 -66.9 -39.2 12.0 12.6 126.6 24 118 A T H X S+ 0 0 60 -4,-1.9 4,-1.6 1,-0.2 -1,-0.2 0.892 111.5 50.8 -72.2 -34.3 12.8 9.4 128.5 25 119 A R H X S+ 0 0 25 -4,-2.1 4,-2.5 2,-0.2 -1,-0.2 0.873 104.0 59.3 -67.5 -34.4 15.3 11.3 130.7 26 120 A E H X S+ 0 0 91 -4,-2.0 4,-2.8 1,-0.2 5,-0.3 0.915 103.9 51.9 -56.9 -41.6 12.6 13.9 131.4 27 121 A I H X S+ 0 0 94 -4,-1.5 4,-2.0 1,-0.2 -1,-0.2 0.928 109.0 48.8 -60.8 -48.5 10.5 11.2 132.9 28 122 A E H X S+ 0 0 74 -4,-1.6 4,-1.7 1,-0.2 -1,-0.2 0.912 112.9 49.3 -57.4 -45.3 13.3 10.0 135.1 29 123 A Q H X S+ 0 0 14 -4,-2.5 4,-2.5 2,-0.2 -2,-0.2 0.940 110.1 47.1 -61.4 -49.4 13.9 13.6 136.3 30 124 A V H X S+ 0 0 46 -4,-2.8 4,-2.5 1,-0.2 -1,-0.2 0.878 109.9 53.1 -68.8 -35.0 10.3 14.5 137.1 31 125 A E H X S+ 0 0 90 -4,-2.0 4,-1.7 -5,-0.3 -1,-0.2 0.880 109.6 49.5 -70.0 -33.6 9.7 11.3 139.1 32 126 A L H X S+ 0 0 16 -4,-1.7 4,-2.4 -5,-0.2 -2,-0.2 0.918 110.6 50.8 -60.5 -46.5 12.9 12.1 141.2 33 127 A L H X S+ 0 0 94 -4,-2.5 4,-2.6 1,-0.2 -2,-0.2 0.903 108.7 51.1 -57.8 -43.0 11.6 15.6 141.7 34 128 A K H X S+ 0 0 101 -4,-2.5 4,-2.4 2,-0.2 -1,-0.2 0.879 109.8 50.2 -65.2 -35.9 8.2 14.3 142.9 35 129 A R H X S+ 0 0 121 -4,-1.7 4,-2.0 2,-0.2 -1,-0.2 0.905 111.2 48.9 -64.0 -45.0 9.9 11.9 145.3 36 130 A I H X S+ 0 0 18 -4,-2.4 4,-1.6 2,-0.2 -2,-0.2 0.929 111.4 49.3 -60.8 -47.9 11.9 14.8 146.7 37 131 A Y H X S+ 0 0 140 -4,-2.6 4,-1.6 1,-0.2 -2,-0.2 0.910 108.7 53.6 -57.0 -44.9 8.8 16.9 147.1 38 132 A D H X S+ 0 0 92 -4,-2.4 4,-2.7 1,-0.2 -1,-0.2 0.886 108.0 50.3 -56.7 -44.8 7.0 14.1 148.9 39 133 A K H X S+ 0 0 72 -4,-2.0 4,-2.6 2,-0.2 -1,-0.2 0.809 106.2 53.8 -68.2 -32.8 9.8 13.7 151.4 40 134 A L H < S+ 0 0 106 -4,-1.6 -1,-0.2 2,-0.2 -2,-0.2 0.805 113.0 44.8 -72.4 -29.3 9.9 17.5 152.2 41 135 A T H < S+ 0 0 104 -4,-1.6 -2,-0.2 -5,-0.2 -1,-0.2 0.913 115.5 47.0 -72.5 -46.3 6.1 17.3 152.9 42 136 A V H < 0 0 127 -4,-2.7 -2,-0.2 -5,-0.2 -3,-0.2 0.862 360.0 360.0 -64.8 -38.3 6.5 14.0 155.0 43 137 A Q < 0 0 113 -4,-2.6 0, 0.0 -5,-0.1 0, 0.0 -0.455 360.0 360.0 -69.2 360.0 9.5 15.4 157.0 44 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 45 95 B I > 0 0 155 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -32.0 18.4 23.9 95.1 46 96 B E H > + 0 0 49 2,-0.2 4,-1.7 1,-0.2 5,-0.1 0.943 360.0 39.1 -64.0 -50.2 21.8 22.2 95.6 47 97 B K H > S+ 0 0 80 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.873 115.8 52.9 -67.2 -39.5 23.3 25.0 97.6 48 98 B Q H > S+ 0 0 65 1,-0.2 4,-1.7 2,-0.2 -2,-0.2 0.894 112.1 44.8 -63.0 -41.5 20.0 25.6 99.5 49 99 B M H X S+ 0 0 33 -4,-2.4 4,-1.9 2,-0.2 -1,-0.2 0.807 109.4 56.6 -73.3 -30.1 19.8 21.9 100.4 50 100 B D H X S+ 0 0 85 -4,-1.7 4,-2.0 2,-0.2 -2,-0.2 0.871 106.5 50.0 -65.2 -38.8 23.5 22.0 101.4 51 101 B R H X S+ 0 0 59 -4,-2.0 4,-2.7 2,-0.2 -2,-0.2 0.902 107.3 54.5 -63.7 -43.4 22.7 24.9 103.8 52 102 B V H X S+ 0 0 66 -4,-1.7 4,-2.3 1,-0.2 -2,-0.2 0.909 108.3 48.9 -55.2 -45.5 19.9 22.7 105.3 53 103 B V H X S+ 0 0 2 -4,-1.9 4,-2.2 2,-0.2 -1,-0.2 0.918 112.0 48.3 -62.5 -45.0 22.3 19.9 105.9 54 104 B K H X S+ 0 0 58 -4,-2.0 4,-1.9 1,-0.2 -2,-0.2 0.914 112.3 48.6 -61.2 -44.3 24.8 22.2 107.6 55 105 B E H X S+ 0 0 75 -4,-2.7 4,-2.1 2,-0.2 -1,-0.2 0.856 109.3 53.4 -67.2 -36.5 22.1 23.8 109.8 56 106 B M H X S+ 0 0 30 -4,-2.3 4,-2.2 -5,-0.2 -1,-0.2 0.934 109.0 48.0 -60.3 -47.6 20.8 20.3 110.8 57 107 B R H X S+ 0 0 117 -4,-2.2 4,-1.7 1,-0.2 -2,-0.2 0.867 110.0 53.9 -63.7 -35.0 24.2 19.3 112.0 58 108 B R H X S+ 0 0 133 -4,-1.9 4,-1.5 2,-0.2 -1,-0.2 0.907 109.1 47.4 -62.2 -44.9 24.5 22.5 113.9 59 109 B Q H X S+ 0 0 80 -4,-2.1 4,-2.2 1,-0.2 -2,-0.2 0.828 106.9 57.5 -69.5 -32.3 21.2 21.8 115.7 60 110 B L H X S+ 0 0 19 -4,-2.2 4,-2.4 2,-0.2 -1,-0.2 0.894 104.0 53.1 -61.4 -39.2 22.3 18.3 116.5 61 111 B E H X S+ 0 0 138 -4,-1.7 4,-2.3 2,-0.2 -2,-0.2 0.903 108.4 50.0 -60.9 -41.1 25.3 19.8 118.2 62 112 B M H X S+ 0 0 115 -4,-1.5 4,-2.4 1,-0.2 -2,-0.2 0.904 111.2 48.6 -62.6 -43.7 23.0 21.9 120.3 63 113 B I H X S+ 0 0 26 -4,-2.2 4,-2.5 2,-0.2 -2,-0.2 0.886 110.0 51.7 -66.9 -37.4 20.9 18.9 121.2 64 114 B D H X S+ 0 0 87 -4,-2.4 4,-2.2 2,-0.2 -2,-0.2 0.925 111.1 48.1 -62.4 -44.8 24.1 16.9 122.2 65 115 B K H X S+ 0 0 113 -4,-2.3 4,-1.9 1,-0.2 -2,-0.2 0.915 111.7 49.4 -61.9 -45.1 25.2 19.8 124.5 66 116 B L H X S+ 0 0 77 -4,-2.4 4,-2.5 1,-0.2 -1,-0.2 0.906 108.0 55.4 -60.9 -43.7 21.7 19.9 126.0 67 117 B T H X S+ 0 0 22 -4,-2.5 4,-2.1 1,-0.2 -2,-0.2 0.941 106.0 50.1 -55.0 -49.9 21.7 16.1 126.6 68 118 B T H X S+ 0 0 69 -4,-2.2 4,-1.9 1,-0.2 -1,-0.2 0.905 111.9 48.0 -57.0 -43.7 25.0 16.3 128.5 69 119 B R H X S+ 0 0 141 -4,-1.9 4,-1.6 1,-0.2 -1,-0.2 0.905 108.6 53.7 -67.3 -39.7 23.6 19.1 130.8 70 120 B E H X S+ 0 0 41 -4,-2.5 4,-1.4 2,-0.2 -1,-0.2 0.880 106.7 52.7 -61.7 -36.0 20.3 17.2 131.4 71 121 B I H X S+ 0 0 68 -4,-2.1 4,-2.1 1,-0.2 3,-0.2 0.923 104.4 56.0 -65.0 -43.7 22.4 14.1 132.5 72 122 B E H X S+ 0 0 111 -4,-1.9 4,-1.9 1,-0.2 -1,-0.2 0.881 103.8 54.9 -54.9 -37.8 24.3 16.4 135.0 73 123 B Q H X S+ 0 0 91 -4,-1.6 4,-2.9 2,-0.2 -1,-0.2 0.878 103.7 54.3 -63.6 -38.4 20.9 17.3 136.4 74 124 B V H X S+ 0 0 12 -4,-1.4 4,-2.6 -3,-0.2 5,-0.2 0.936 106.9 51.5 -62.7 -43.0 20.1 13.6 137.0 75 125 B E H X S+ 0 0 132 -4,-2.1 4,-1.9 1,-0.2 -2,-0.2 0.937 112.4 45.6 -58.2 -44.7 23.3 13.3 139.0 76 126 B L H X S+ 0 0 91 -4,-1.9 4,-2.7 2,-0.2 5,-0.2 0.919 111.5 51.7 -64.0 -42.8 22.3 16.3 141.2 77 127 B L H X S+ 0 0 16 -4,-2.9 4,-2.5 1,-0.2 -2,-0.2 0.926 110.3 49.3 -61.6 -43.3 18.8 15.0 141.7 78 128 B K H X S+ 0 0 106 -4,-2.6 4,-2.2 -5,-0.2 -1,-0.2 0.901 111.9 48.5 -61.0 -43.0 20.1 11.6 142.8 79 129 B R H X S+ 0 0 165 -4,-1.9 4,-1.8 -5,-0.2 -2,-0.2 0.894 111.5 49.7 -65.6 -40.9 22.5 13.2 145.2 80 130 B I H X S+ 0 0 79 -4,-2.7 4,-1.7 2,-0.2 -2,-0.2 0.928 110.8 49.6 -64.0 -46.4 19.7 15.5 146.6 81 131 B Y H X S+ 0 0 13 -4,-2.5 4,-2.4 1,-0.2 -2,-0.2 0.930 109.3 51.6 -60.9 -42.9 17.4 12.6 147.1 82 132 B D H X S+ 0 0 98 -4,-2.2 4,-2.2 1,-0.2 -1,-0.2 0.851 106.1 54.9 -61.1 -38.6 20.1 10.5 148.9 83 133 B K H X S+ 0 0 142 -4,-1.8 4,-2.1 2,-0.2 -1,-0.2 0.864 109.3 47.8 -63.6 -36.8 20.8 13.4 151.3 84 134 B L H < S+ 0 0 40 -4,-1.7 -2,-0.2 2,-0.2 -1,-0.2 0.935 111.1 49.4 -68.5 -46.6 17.1 13.5 152.3 85 135 B T H < S+ 0 0 86 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.887 110.7 52.2 -58.0 -40.6 16.9 9.7 152.8 86 136 B V H < 0 0 125 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.941 360.0 360.0 -60.7 -49.5 20.1 10.0 155.0 87 137 B Q < 0 0 181 -4,-2.1 -2,-0.2 -5,-0.1 -3,-0.2 0.990 360.0 360.0 -67.2 360.0 18.4 12.7 157.1