==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL ADHESION 29-OCT-02 1O7C . COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR-INDUCIBLE PROTEIN TSG-6; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR C.D.BLUNDELL,P.TERIETE,J.D.KAHMANN,A.R.PICKFORD, . 98 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6233.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 55.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 18 18.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 16 16.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 T G 0 0 44 0, 0.0 93,-1.4 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 84.2 -10.0 3.5 8.2 2 2 T V E +A 93 0A 25 91,-0.2 2,-0.3 33,-0.1 91,-0.2 -0.895 360.0 167.3-110.0 134.9 -7.6 1.7 5.9 3 3 T Y E -A 92 0A 67 89,-2.2 89,-2.5 -2,-0.4 28,-0.1 -0.992 33.6-115.4-147.8 137.0 -8.6 0.5 2.4 4 4 T H E -A 91 0A 53 -2,-0.3 2,-0.3 87,-0.2 87,-0.2 -0.340 32.6-169.0 -69.2 150.4 -6.6 -0.7 -0.6 5 5 T R E -A 90 0A 105 85,-1.0 85,-2.8 -2,-0.0 2,-0.2 -0.999 6.4-166.3-144.2 144.9 -6.6 1.4 -3.8 6 6 T E - 0 0 98 -2,-0.3 2,-0.3 83,-0.2 5,-0.1 -0.434 32.1 -81.6-115.9-169.0 -5.4 0.8 -7.4 7 7 T A - 0 0 8 -2,-0.2 3,-0.1 1,-0.1 7,-0.1 -0.678 31.0-118.7 -99.1 153.6 -4.8 2.9 -10.5 8 8 T R S S+ 0 0 230 -2,-0.3 -1,-0.1 1,-0.2 3,-0.1 0.694 121.1 41.3 -61.1 -17.5 -7.4 4.1 -13.0 9 9 T S S S- 0 0 85 1,-0.4 -1,-0.2 4,-0.0 2,-0.2 0.678 128.6 -79.6-101.2 -25.2 -5.4 2.1 -15.5 10 10 T G - 0 0 24 -3,-0.1 -1,-0.4 0, 0.0 -3,-0.1 -0.706 61.1 -41.1 142.3 166.3 -4.8 -0.9 -13.3 11 11 T K S S+ 0 0 107 -2,-0.2 78,-0.1 1,-0.2 -5,-0.1 -0.154 115.3 32.4 -56.7 152.0 -2.6 -2.3 -10.6 12 12 T Y S S+ 0 0 90 37,-0.2 -1,-0.2 2,-0.1 77,-0.2 0.965 94.5 92.1 63.2 55.4 1.1 -1.5 -10.7 13 13 T K + 0 0 86 75,-1.5 2,-0.4 -3,-0.1 76,-0.1 0.265 57.6 98.0-154.5 1.1 0.8 1.9 -12.3 14 14 T L B -E 88 0B 11 74,-2.1 74,-2.3 -7,-0.1 2,-0.3 -0.850 55.5-153.0-104.1 134.9 0.6 4.3 -9.3 15 15 T T >> - 0 0 24 -2,-0.4 4,-3.4 72,-0.2 3,-0.9 -0.786 35.2-104.6-105.1 148.1 3.6 6.2 -8.0 16 16 T Y H 3> S+ 0 0 18 68,-0.6 4,-1.6 -2,-0.3 5,-0.2 0.810 127.5 48.6 -35.3 -38.7 4.1 7.4 -4.4 17 17 T A H 3> S+ 0 0 53 67,-0.4 4,-2.0 2,-0.2 -1,-0.3 0.912 118.4 36.9 -71.5 -44.1 3.2 10.8 -5.8 18 18 T E H <> S+ 0 0 95 -3,-0.9 4,-2.0 2,-0.2 -2,-0.2 0.936 113.9 56.0 -73.1 -48.2 0.1 9.6 -7.7 19 19 T A H X S+ 0 0 0 -4,-3.4 4,-1.8 1,-0.2 -3,-0.2 0.891 112.6 43.5 -49.8 -45.6 -0.9 7.1 -5.0 20 20 T K H X>S+ 0 0 74 -4,-1.6 4,-3.5 -5,-0.5 5,-0.6 0.969 105.7 59.1 -66.2 -55.7 -0.9 9.9 -2.5 21 21 T A H X5S+ 0 0 49 -4,-2.0 4,-0.6 1,-0.3 -1,-0.2 0.826 109.2 48.2 -42.2 -38.2 -2.7 12.5 -4.7 22 22 T V H X5S+ 0 0 40 -4,-2.0 4,-0.9 2,-0.2 -1,-0.3 0.942 116.1 40.3 -70.5 -49.9 -5.5 9.9 -4.9 23 23 T a H ><>S+ 0 0 1 -4,-1.8 5,-1.2 1,-0.2 3,-0.7 0.955 121.6 41.8 -64.0 -51.7 -5.7 9.2 -1.1 24 24 T E H ><5S+ 0 0 111 -4,-3.5 3,-1.3 1,-0.2 -1,-0.2 0.663 97.7 83.3 -69.8 -15.8 -5.2 12.9 -0.1 25 25 T F H 3< - 0 0 43 -2,-0.3 4,-2.5 20,-0.2 5,-0.1 -0.259 26.9 -97.4 -98.8-171.0 1.4 3.3 6.9 33 33 T Y H > S+ 0 0 80 2,-0.2 4,-2.4 3,-0.2 5,-0.1 0.994 121.6 40.4 -70.6 -68.3 3.0 -0.0 8.0 34 34 T K H > S+ 0 0 157 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.847 120.5 49.1 -49.4 -37.8 1.7 -0.2 11.6 35 35 T Q H > S+ 0 0 67 2,-0.2 4,-1.5 1,-0.2 5,-0.2 0.980 111.7 44.5 -67.7 -57.1 -1.6 1.1 10.3 36 36 T L H X S+ 0 0 0 -4,-2.5 4,-1.6 1,-0.2 -2,-0.2 0.751 113.0 59.3 -58.6 -21.4 -1.9 -1.3 7.4 37 37 T E H X S+ 0 0 49 -4,-2.4 4,-2.8 2,-0.2 5,-0.3 0.982 102.3 46.0 -70.3 -60.8 -0.9 -3.9 10.0 38 38 T A H < S+ 0 0 52 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.747 120.4 44.0 -55.2 -22.5 -3.7 -3.3 12.5 39 39 T A H >X>S+ 0 0 10 -4,-1.5 5,-2.2 -5,-0.2 4,-0.7 0.753 109.1 55.9 -91.6 -29.3 -5.9 -3.5 9.4 40 40 T R H ><5S+ 0 0 35 -4,-1.6 3,-0.5 -5,-0.2 -2,-0.2 0.846 102.3 56.5 -69.6 -35.3 -4.1 -6.5 7.9 41 41 T K T 3<5S+ 0 0 130 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.635 107.2 50.8 -71.7 -13.3 -4.7 -8.4 11.1 42 42 T I T <45S- 0 0 142 -3,-0.5 -1,-0.2 -5,-0.3 -2,-0.2 0.600 142.4 -70.3 -97.3 -16.0 -8.4 -7.8 10.5 43 43 T G T <<5S+ 0 0 56 -4,-0.7 2,-1.5 -3,-0.5 -3,-0.2 0.422 80.2 147.8 137.9 9.2 -8.3 -9.0 7.0 44 44 T F < + 0 0 18 -5,-2.2 2,-0.4 -7,-0.2 -1,-0.1 -0.569 22.3 156.1 -75.9 91.1 -6.4 -6.3 5.1 45 45 T H + 0 0 70 -2,-1.5 2,-0.2 16,-0.1 16,-0.2 -0.975 11.3 159.8-123.2 129.1 -4.7 -8.5 2.4 46 46 T V - 0 0 21 14,-1.3 2,-2.3 -2,-0.4 4,-0.1 -0.752 31.2-146.9-151.2 98.6 -3.5 -7.3 -0.9 47 47 T b S S+ 0 0 44 -2,-0.2 2,-0.2 2,-0.1 14,-0.1 -0.412 71.5 81.7 -66.3 80.7 -0.9 -9.2 -3.0 48 48 T A S S- 0 0 7 -2,-2.3 2,-0.2 12,-0.3 10,-0.1 -0.779 92.1 -87.4 177.7 136.3 0.7 -6.1 -4.5 49 49 T A - 0 0 1 -2,-0.2 40,-3.1 10,-0.2 2,-0.6 -0.323 47.3-163.8 -54.3 112.8 3.3 -3.5 -3.5 50 50 T G E -Cd 58 89A 0 8,-2.2 8,-1.3 -2,-0.2 40,-0.2 -0.908 17.3-122.2-109.7 118.6 1.3 -0.8 -1.7 51 51 T W E +Cd 57 90A 4 38,-1.6 40,-1.1 -2,-0.6 -20,-0.3 -0.105 45.7 148.4 -52.4 150.1 2.8 2.6 -1.2 52 52 T M E >> +C 56 0A 0 4,-1.2 4,-1.4 -22,-0.1 3,-0.9 -0.969 32.8 26.9-169.8 176.2 3.0 3.9 2.3 53 53 T A T 34 S- 0 0 25 -22,-0.5 -23,-0.1 -2,-0.3 -1,-0.0 0.044 116.6 -35.8 51.0-165.4 5.0 6.0 4.8 54 54 T K T 34 S- 0 0 180 1,-0.2 -1,-0.2 26,-0.0 -22,-0.0 0.582 132.0 -36.1 -63.2 -8.8 7.1 8.9 3.6 55 55 T G T <4 S+ 0 0 2 -3,-0.9 26,-0.5 1,-0.1 2,-0.4 0.374 99.7 132.8 159.9 18.5 7.8 6.8 0.5 56 56 T R E < -C 52 0A 92 -4,-1.4 -4,-1.2 24,-0.2 2,-0.5 -0.780 33.3-165.1 -95.1 132.5 8.1 3.2 1.6 57 57 T V E +C 51 0A 13 -2,-0.4 21,-0.5 22,-0.4 -6,-0.2 -0.966 14.5 167.3-121.4 121.0 6.3 0.5 -0.4 58 58 T G E -C 50 0A 0 -8,-1.3 -8,-2.2 -2,-0.5 19,-0.3 -0.450 37.6-115.1-116.9-168.9 5.8 -3.0 1.0 59 59 T Y E -F 76 0C 85 17,-0.6 17,-0.8 -10,-0.2 2,-0.2 -0.646 27.5-158.9-133.9 77.0 3.8 -6.1 0.2 60 60 T P E +F 75 0C 0 0, 0.0 -14,-1.3 0, 0.0 2,-0.4 -0.365 17.7 172.4 -59.4 122.3 1.3 -6.8 3.1 61 61 T I E +F 74 0C 4 13,-1.1 13,-0.9 -2,-0.2 -16,-0.1 -0.919 21.5 172.8-139.9 110.9 0.2 -10.5 3.0 62 62 T V S S+ 0 0 62 -2,-0.4 -1,-0.1 1,-0.2 -17,-0.1 0.615 80.2 52.6 -88.9 -14.9 -1.9 -12.1 5.7 63 63 T K S S- 0 0 158 11,-0.1 2,-0.2 10,-0.0 6,-0.2 -0.869 89.1-130.5-126.7 98.1 -2.3 -15.3 3.7 64 64 T P - 0 0 70 0, 0.0 9,-0.1 0, 0.0 -2,-0.0 -0.233 30.3-146.9 -48.7 105.4 1.0 -16.8 2.5 65 65 T G - 0 0 15 -2,-0.2 7,-0.1 1,-0.1 -4,-0.0 -0.303 12.1-133.2 -75.2 161.9 0.3 -17.5 -1.2 66 66 T P S S+ 0 0 106 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.863 103.0 2.9 -81.8 -39.8 1.7 -20.4 -3.1 67 67 T N S S+ 0 0 132 2,-0.0 -2,-0.1 3,-0.0 0, 0.0 0.563 130.7 60.2-119.2 -22.4 2.8 -18.4 -6.2 68 68 T b S S+ 0 0 76 1,-0.1 0, 0.0 4,-0.0 0, 0.0 0.977 128.6 2.1 -70.5 -83.6 1.9 -14.9 -5.1 69 69 T G S S- 0 0 14 -6,-0.2 -1,-0.1 3,-0.1 4,-0.1 0.472 91.1-131.1 -85.2 -1.8 3.9 -14.2 -1.9 70 70 T F S S- 0 0 177 1,-0.2 -1,-0.1 2,-0.1 -3,-0.0 0.510 78.6 -42.1 64.8 2.4 5.6 -17.6 -2.1 71 71 T G S S+ 0 0 43 -8,-0.1 -1,-0.2 1,-0.1 2,-0.2 0.768 89.4 168.2 110.5 44.6 4.6 -17.9 1.5 72 72 T K - 0 0 88 -9,-0.1 2,-0.4 -7,-0.1 -1,-0.1 -0.505 24.8-138.7 -87.1 157.2 5.4 -14.6 3.1 73 73 T T - 0 0 117 -2,-0.2 -11,-0.2 -10,-0.1 -10,-0.0 -0.966 57.4 -26.0-121.2 130.6 4.2 -13.5 6.6 74 74 T G E S-F 61 0C 14 -13,-0.9 -13,-1.1 -2,-0.4 2,-0.4 -0.110 111.6 -18.6 65.1-168.0 2.9 -10.1 7.5 75 75 T I E -F 60 0C 11 -15,-0.3 2,-1.2 1,-0.1 -2,-0.1 -0.581 59.3-147.6 -75.4 126.0 3.8 -7.0 5.6 76 76 T I E +F 59 0C 20 -17,-0.8 -17,-0.6 -2,-0.4 2,-0.4 -0.674 36.4 155.5 -96.0 81.3 6.9 -7.4 3.5 77 77 T D + 0 0 40 -2,-1.2 -19,-0.2 -19,-0.3 3,-0.1 -0.916 24.6 174.6-112.4 133.5 8.4 -3.9 3.6 78 78 T Y - 0 0 163 -21,-0.5 2,-0.1 -2,-0.4 -1,-0.1 0.445 53.1-107.8-110.8 -6.8 12.1 -3.1 3.1 79 79 T G - 0 0 20 -22,-0.2 -22,-0.4 2,-0.0 -1,-0.4 -0.362 58.3 -25.0 103.8 174.0 11.7 0.6 3.1 80 80 T I - 0 0 90 -24,-0.2 -24,-0.2 -2,-0.1 -27,-0.0 -0.087 43.0-155.7 -55.6 157.7 12.0 3.3 0.5 81 81 T R - 0 0 183 -26,-0.5 -1,-0.1 0, 0.0 -25,-0.1 0.206 41.4-111.8-120.7 11.0 14.0 2.7 -2.6 82 82 T L S S+ 0 0 159 -27,-0.2 -26,-0.1 1,-0.1 -2,-0.0 0.909 95.4 90.5 58.0 44.3 14.8 6.3 -3.5 83 83 T N > + 0 0 73 -28,-0.2 3,-0.9 1,-0.0 -67,-0.1 -0.342 40.2 171.0-168.6 75.7 12.6 6.0 -6.6 84 84 T R T 3 + 0 0 135 1,-0.3 -68,-0.6 -69,-0.1 -67,-0.4 0.553 68.6 90.3 -66.9 -5.9 8.9 7.0 -6.2 85 85 T S T 3 + 0 0 81 -70,-0.1 -1,-0.3 -69,-0.1 -70,-0.1 0.321 66.9 112.9 -73.7 10.9 8.8 6.7 -10.0 86 86 T E < - 0 0 50 -3,-0.9 2,-0.4 1,-0.0 -70,-0.0 -0.121 68.0-122.2 -75.3 177.4 7.9 3.1 -9.5 87 87 T R + 0 0 152 -72,-0.1 2,-0.2 -75,-0.1 -72,-0.2 -0.945 54.1 108.2-131.7 113.5 4.5 1.5 -10.3 88 88 T W B -E 14 0B 58 -74,-2.3 -74,-2.1 -2,-0.4 -75,-1.5 -0.665 62.5 -62.2-151.9-153.5 2.4 -0.2 -7.7 89 89 T D E - d 0 50A 0 -40,-3.1 -38,-1.6 -2,-0.2 2,-0.4 -0.235 40.4-124.0 -96.8-171.8 -0.8 0.2 -5.7 90 90 T A E -Ad 5 51A 0 -85,-2.8 -85,-1.0 -40,-0.2 2,-0.7 -0.941 7.8-146.4-143.8 119.2 -1.8 2.8 -3.1 91 91 T Y E -A 4 0A 0 -40,-1.1 -60,-2.9 -2,-0.4 2,-0.2 -0.740 21.9-157.7 -86.8 116.2 -3.0 2.2 0.5 92 92 T a E -AB 3 30A 6 -89,-2.5 -89,-2.2 -2,-0.7 2,-0.2 -0.601 12.7-175.2 -93.5 155.3 -5.6 4.8 1.5 93 93 T Y E +AB 2 29A 65 -64,-0.6 -64,-1.2 -91,-0.2 -91,-0.2 -0.748 12.9 159.6-153.6 99.3 -6.4 5.8 5.0 94 94 T N - 0 0 6 -93,-1.4 -66,-0.1 -2,-0.2 -67,-0.1 -0.978 42.9-132.9-126.1 135.9 -9.2 8.2 5.8 95 95 T P S S- 0 0 85 0, 0.0 -1,-0.1 0, 0.0 -67,-0.1 0.822 110.5 -3.3 -51.6 -33.3 -11.1 8.7 9.1 96 96 T H S S- 0 0 159 -95,-0.1 -68,-0.1 2,-0.1 -2,-0.0 0.527 79.4-161.6-131.3 -27.3 -14.3 8.6 7.1 97 97 T A 0 0 34 -70,-0.2 -70,-0.1 1,-0.2 -3,-0.1 0.882 360.0 360.0 37.1 58.2 -13.1 8.4 3.5 98 98 T K 0 0 235 -72,-0.2 -1,-0.2 -71,-0.1 -2,-0.1 -0.972 360.0 360.0-124.6 360.0 -16.5 9.5 2.2