==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 03-JUL-96 1OCD . COMPND 2 MOLECULE: CYTOCHROME C; . SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; . AUTHOR P.X.QI,R.A.BECKMAN,A.J.WAND . 104 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6882.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 52.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 5.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 30 28.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 75 0, 0.0 2,-0.3 0, 0.0 92,-0.2 0.000 360.0 360.0 360.0-125.3 -12.2 -4.6 -6.9 2 2 A D - 0 0 80 91,-0.3 95,-0.4 90,-0.3 4,-0.0 -0.991 360.0-156.4-162.9 159.8 -13.4 -1.0 -6.8 3 3 A V S > S+ 0 0 90 -2,-0.3 4,-1.4 93,-0.1 5,-0.2 0.786 96.1 32.0-107.8 -68.0 -12.3 2.6 -7.6 4 4 A E H > S+ 0 0 152 2,-0.2 4,-1.3 3,-0.2 5,-0.2 0.846 120.2 58.1 -61.7 -28.8 -14.3 5.1 -5.5 5 5 A K H >> S+ 0 0 124 1,-0.2 4,-2.1 2,-0.2 3,-1.5 1.000 114.6 31.6 -64.4 -67.6 -14.5 2.5 -2.8 6 6 A G H 3> S+ 0 0 0 87,-0.3 4,-1.8 1,-0.3 5,-0.3 0.670 111.0 72.0 -65.3 -10.3 -10.7 1.9 -2.3 7 7 A K H 3X S+ 0 0 84 -4,-1.4 4,-1.5 2,-0.2 -1,-0.3 0.874 107.2 33.6 -72.6 -32.3 -10.5 5.6 -3.2 8 8 A K H S+ 0 0 10 -4,-2.1 4,-1.2 -5,-0.2 5,-0.7 0.852 115.2 41.0 -68.1 -31.7 -10.4 3.5 1.9 10 10 A F H X5S+ 0 0 6 -4,-1.8 4,-0.6 -5,-0.2 -2,-0.2 0.951 116.8 43.7 -81.0 -55.1 -7.0 4.8 0.7 11 11 A V H <5S+ 0 0 84 -4,-1.5 -2,-0.2 -5,-0.3 -1,-0.2 0.592 118.0 50.2 -68.8 -5.9 -7.4 8.5 1.2 12 12 A Q H <5S+ 0 0 93 -4,-0.8 -1,-0.2 3,-0.1 -2,-0.2 0.794 128.6 12.4-100.1 -36.6 -8.9 7.8 4.6 13 13 A K H <5S+ 0 0 96 -4,-1.2 3,-0.4 -5,-0.2 -3,-0.2 0.823 138.6 26.9-107.7 -55.7 -6.4 5.4 6.1 14 14 A C S X S+ 0 0 16 -13,-1.5 3,-0.6 1,-0.1 70,-0.1 -0.174 72.2 126.4-115.0 42.2 2.2 3.5 -4.0 33 33 A H T 3 S+ 0 0 139 1,-0.2 -1,-0.1 -9,-0.2 6,-0.1 0.478 79.0 50.6 -77.8 3.9 4.2 3.8 -7.3 34 34 A G T > S+ 0 0 4 -3,-0.2 3,-0.6 4,-0.1 -1,-0.2 0.538 84.2 114.2-113.2 -13.5 5.4 0.2 -6.7 35 35 A L T < S- 0 0 17 -3,-0.6 4,-0.2 1,-0.2 25,-0.1 0.106 87.9 -3.9 -47.7 175.8 1.9 -1.3 -6.1 36 36 A F T 3 S+ 0 0 47 23,-1.6 -1,-0.2 1,-0.2 24,-0.1 0.490 108.2 100.0 -2.4 72.1 0.6 -3.9 -8.7 37 37 A G S < S- 0 0 50 -3,-0.6 2,-1.1 2,-0.1 -1,-0.2 0.287 93.7-109.2-155.8 12.0 3.7 -3.4 -10.9 38 38 A R S S+ 0 0 207 -4,-0.1 2,-0.5 1,-0.1 -2,-0.1 -0.105 98.2 86.0 81.5 -42.6 6.1 -6.4 -10.3 39 39 A K + 0 0 161 -2,-1.1 3,-0.1 -4,-0.2 -2,-0.1 -0.776 48.6 174.2 -95.0 132.6 8.6 -4.0 -8.5 40 40 A T + 0 0 2 -2,-0.5 2,-2.2 17,-0.2 -1,-0.2 0.858 69.7 62.4-100.0 -62.0 8.0 -3.4 -4.8 41 41 A G S S+ 0 0 12 10,-0.2 -1,-0.2 1,-0.1 12,-0.1 -0.395 71.8 177.6 -65.6 84.4 10.9 -1.3 -3.6 42 42 A Q - 0 0 41 -2,-2.2 -1,-0.1 1,-0.2 -2,-0.1 0.888 67.5 -9.2 -55.5-101.0 10.1 1.7 -5.9 43 43 A A > - 0 0 51 1,-0.2 3,-2.3 2,-0.0 -1,-0.2 -0.772 65.4-166.3-104.9 89.2 12.7 4.4 -5.3 44 44 A P T 3 S+ 0 0 46 0, 0.0 4,-0.3 0, 0.0 -1,-0.2 0.670 73.6 92.8 -48.0 -17.9 14.6 3.2 -2.1 45 45 A G T 3 S+ 0 0 80 2,-0.1 8,-0.0 8,-0.1 -2,-0.0 0.783 77.8 70.9 -51.3 -20.2 16.0 6.7 -1.9 46 46 A F S < S- 0 0 52 -3,-2.3 -1,-0.0 7,-0.1 7,-0.0 0.823 117.6 -82.2 -64.3-109.3 13.0 7.2 0.4 47 47 A T + 0 0 77 6,-0.0 -2,-0.1 2,-0.0 6,-0.1 0.196 63.9 157.5-150.5 18.7 13.4 5.4 3.7 48 48 A Y - 0 0 14 -4,-0.3 30,-0.1 -5,-0.2 -7,-0.0 -0.009 43.8-114.9 -44.2 157.9 12.4 1.7 3.1 49 49 A T > - 0 0 33 1,-0.1 2,-1.2 4,-0.0 4,-0.6 0.130 53.0 -65.4 -78.6-155.3 13.8 -0.7 5.6 50 50 A D T 4 S+ 0 0 147 27,-0.5 -1,-0.1 1,-0.1 28,-0.1 -0.308 131.5 32.9 -90.0 54.7 16.4 -3.3 4.6 51 51 A A T 4 S+ 0 0 20 -2,-1.2 -10,-0.2 26,-0.1 -1,-0.1 0.159 113.9 45.2-167.3 -57.2 13.8 -5.2 2.5 52 52 A N T >4 S+ 0 0 19 2,-0.2 3,-1.0 1,-0.2 -4,-0.1 0.881 102.0 74.2 -71.3 -32.2 11.1 -3.0 0.8 53 53 A K T 3< S- 0 0 87 -4,-0.6 -1,-0.2 1,-0.3 -3,-0.1 0.939 129.0 -5.4 -41.0 -64.7 14.0 -0.7 -0.2 54 54 A N T 3 S+ 0 0 140 -5,-0.2 -1,-0.3 -10,-0.1 -2,-0.2 -0.241 100.3 149.8-126.9 42.4 15.2 -3.2 -2.8 55 55 A K < - 0 0 70 -3,-1.0 -3,-0.1 1,-0.1 -4,-0.0 0.453 40.3-143.6 -54.9-152.5 12.8 -6.0 -2.1 56 56 A G + 0 0 66 2,-0.1 -1,-0.1 -17,-0.1 -4,-0.1 0.266 60.6 98.2-166.8 14.5 11.6 -8.4 -4.8 57 57 A I - 0 0 43 1,-0.1 -17,-0.2 6,-0.0 2,-0.2 0.057 63.0-125.8 -89.7-151.8 7.9 -9.3 -4.2 58 58 A T - 0 0 56 -19,-0.1 -1,-0.1 -18,-0.1 -22,-0.1 -0.671 9.1-120.9-141.3-164.0 4.9 -7.6 -5.9 59 59 A W + 0 0 11 -2,-0.2 -23,-1.6 -25,-0.1 -20,-0.0 -0.116 62.7 113.7-145.6 50.3 1.7 -5.8 -4.8 60 60 A K S >>S- 0 0 127 -25,-0.1 4,-1.2 4,-0.1 5,-0.6 0.345 87.0 -58.9 -90.0-132.1 -1.3 -7.6 -6.2 61 61 A E H >>S+ 0 0 100 3,-0.2 5,-1.1 2,-0.2 4,-0.7 0.921 132.5 38.5 -80.5 -85.9 -3.7 -9.2 -3.8 62 62 A E H >5S+ 0 0 136 1,-0.3 4,-0.7 3,-0.2 5,-0.4 0.841 124.5 46.8 -32.8 -40.8 -1.9 -12.0 -1.7 63 63 A T H >5S+ 0 0 39 3,-0.2 4,-1.8 2,-0.1 -1,-0.3 0.975 132.1 18.9 -71.0 -50.1 1.0 -9.5 -1.7 64 64 A L H X5S+ 0 0 15 -4,-1.2 4,-1.6 2,-0.2 5,-0.4 0.968 120.7 58.8 -81.8 -65.9 -1.2 -6.6 -0.8 65 65 A M H XX< S+ 0 0 36 -4,-1.8 3,-0.8 -5,-0.4 6,-0.2 0.931 107.0 59.8 -40.7 -67.6 0.3 -6.6 3.8 68 68 A L H 3< S+ 0 0 20 -4,-1.6 -1,-0.2 1,-0.3 16,-0.2 0.845 98.2 59.6 -32.1 -53.8 -2.9 -4.5 4.3 69 69 A E H << S- 0 0 53 -4,-0.9 -1,-0.3 -3,-0.6 -2,-0.2 0.954 134.6 -14.7 -43.8 -59.8 -4.0 -6.8 7.1 70 70 A N > S+ 0 0 6 0, 0.0 3,-1.6 0, 0.0 4,-1.3 0.978 100.9 45.8 -51.6 -78.4 2.3 -4.2 7.5 72 72 A K H 34 S+ 0 0 95 8,-0.5 5,-0.2 1,-0.3 6,-0.1 0.794 100.5 76.0 -39.8 -28.5 5.1 -5.9 9.4 73 73 A K H 34 S+ 0 0 67 2,-0.2 -1,-0.3 1,-0.2 -6,-0.1 0.967 99.4 39.3 -52.6 -54.0 3.2 -9.2 8.6 74 74 A Y H << S- 0 0 34 -3,-1.6 -1,-0.2 -4,-1.1 -2,-0.2 0.898 149.0 -4.6 -63.2 -34.7 4.4 -9.1 5.0 75 75 A I >< - 0 0 34 -4,-1.3 3,-1.9 -8,-0.1 -1,-0.3 -0.609 60.1-170.1-161.4 92.7 7.8 -7.9 6.3 76 76 A P T 3 S+ 0 0 86 0, 0.0 -4,-0.2 0, 0.0 -3,-0.1 0.627 86.1 75.2 -62.0 -10.5 8.2 -7.1 10.0 77 77 A G T 3 S+ 0 0 41 -5,-0.2 -27,-0.5 2,-0.1 -25,-0.1 0.400 77.2 107.8 -82.2 7.4 11.6 -5.6 9.0 78 78 A T S < S- 0 0 19 -3,-1.9 -28,-0.1 -29,-0.1 -30,-0.1 -0.156 71.8-134.9 -74.7 177.4 9.6 -2.7 7.7 79 79 A K S S+ 0 0 172 -30,-0.0 2,-0.3 -8,-0.0 -1,-0.1 0.021 75.2 80.6-123.4 26.9 9.5 0.7 9.4 80 80 A M - 0 0 38 2,-0.0 -8,-0.5 -51,-0.0 2,-0.3 -0.966 49.7-176.2-133.6 151.8 5.8 1.4 9.2 81 81 A I + 0 0 122 -2,-0.3 2,-0.2 -10,-0.1 -11,-0.0 -0.999 17.4 142.9-146.7 143.2 2.7 0.2 11.3 82 82 A F - 0 0 67 -2,-0.3 2,-0.9 -14,-0.1 3,-0.1 -0.562 21.7-168.4 179.9 107.9 -1.0 0.8 10.9 83 83 A A + 0 0 81 -2,-0.2 3,-0.1 1,-0.1 -13,-0.1 -0.598 52.1 110.6-105.5 73.2 -3.8 -1.7 11.6 84 84 A G S > S+ 0 0 36 -2,-0.9 2,-1.5 -16,-0.2 3,-0.5 0.785 78.2 31.1-108.2 -71.0 -6.8 0.1 10.1 85 85 A I T 3 S+ 0 0 2 1,-0.2 -1,-0.1 -3,-0.1 9,-0.1 -0.253 79.2 124.7 -85.5 52.9 -8.1 -1.6 6.9 86 86 A K T 3 + 0 0 97 -2,-1.5 -1,-0.2 -3,-0.1 -17,-0.1 0.631 47.5 90.0 -85.9 -11.7 -7.0 -5.1 8.2 87 87 A K S < S- 0 0 160 -3,-0.5 -2,-0.1 1,-0.1 -18,-0.0 0.884 83.9-128.9 -48.3 -99.7 -10.6 -6.4 7.8 88 88 A K S > S+ 0 0 132 -20,-0.0 4,-2.2 -19,-0.0 5,-0.2 -0.152 86.3 59.7 180.0 -73.8 -10.7 -7.8 4.2 89 89 A T H > S+ 0 0 99 1,-0.3 4,-1.6 2,-0.2 3,-0.5 0.946 114.3 42.3 -42.3 -64.8 -13.5 -6.8 1.9 90 90 A E H > S+ 0 0 77 1,-0.2 4,-2.3 2,-0.2 -1,-0.3 0.929 106.7 65.5 -50.3 -44.5 -12.6 -3.1 2.1 91 91 A R H > S+ 0 0 7 1,-0.2 4,-1.9 2,-0.2 3,-0.3 0.937 100.0 49.8 -44.1 -55.2 -8.9 -4.2 1.8 92 92 A E H X S+ 0 0 97 -4,-2.2 4,-1.3 -3,-0.5 5,-0.3 0.960 105.9 56.0 -50.8 -52.5 -9.6 -5.4 -1.7 93 93 A D H X S+ 0 0 19 -4,-1.6 4,-2.0 1,-0.2 -91,-0.3 0.920 104.4 55.6 -46.3 -45.4 -11.2 -2.1 -2.6 94 94 A L H X S+ 0 0 11 -4,-2.3 4,-2.2 -3,-0.3 -1,-0.2 0.960 110.5 43.6 -53.7 -54.6 -7.9 -0.5 -1.4 95 95 A I H X S+ 0 0 20 -4,-1.9 4,-2.6 2,-0.2 -2,-0.2 0.986 116.1 42.9 -57.0 -76.5 -5.8 -2.5 -3.9 96 96 A A H X S+ 0 0 24 -4,-1.3 4,-1.4 1,-0.2 5,-0.4 0.892 114.4 52.5 -35.8 -61.8 -8.0 -2.3 -7.0 97 97 A Y H >X S+ 0 0 3 -4,-2.0 4,-2.0 -95,-0.4 3,-0.9 0.937 112.1 45.2 -39.7 -64.4 -8.6 1.4 -6.5 98 98 A L H 3X S+ 0 0 2 -4,-2.2 4,-2.1 -5,-0.3 5,-0.3 0.897 100.0 71.3 -48.4 -46.4 -4.9 2.1 -6.1 99 99 A K H 3< S+ 0 0 116 -4,-2.6 -1,-0.2 1,-0.3 -2,-0.2 0.901 117.8 19.6 -39.9 -53.0 -4.2 -0.1 -9.2 100 100 A K H << S+ 0 0 155 -4,-1.4 -1,-0.3 -3,-0.9 -2,-0.2 0.580 117.1 71.2 -97.3 -9.2 -5.7 2.6 -11.5 101 101 A A H >< S+ 0 0 8 -4,-2.0 3,-1.2 -5,-0.4 -3,-0.2 0.985 105.9 35.8 -70.5 -55.2 -5.4 5.4 -9.0 102 102 A T T 3< S+ 0 0 36 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.1 0.418 100.2 83.1 -79.0 9.2 -1.6 5.7 -9.2 103 103 A N T 3 0 0 119 -5,-0.3 -1,-0.3 1,-0.2 -2,-0.2 0.407 360.0 360.0 -89.6 5.6 -2.0 4.9 -12.9 104 104 A E < 0 0 199 -3,-1.2 -1,-0.2 -84,-0.2 -2,-0.1 0.754 360.0 360.0 -38.8 360.0 -2.7 8.6 -13.4