==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=9-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA-BINDING PROTEIN 21-FEB-95 1OCP . COMPND 2 MOLECULE: OCT-3; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR E.H.MORITA,F.HAYASHI,M.SHIRAKAWA,Y.KYOGOKU . 67 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6399.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 31 46.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 41.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 232 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -49.9 46.4 -2.6 23.7 2 2 A E + 0 0 197 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.294 360.0 108.1 -99.3 50.6 49.1 -5.2 24.1 3 3 A T - 0 0 76 -2,-0.4 3,-0.1 3,-0.0 0, 0.0 -0.930 45.0-171.7-126.2 150.9 48.3 -7.1 20.9 4 4 A L + 0 0 157 -2,-0.3 3,-0.1 1,-0.1 -2,-0.0 -0.294 69.3 75.0-136.0 52.1 50.2 -7.3 17.6 5 5 A V S S+ 0 0 120 1,-0.0 -1,-0.1 2,-0.0 0, 0.0 0.083 80.2 66.4-149.4 26.7 47.8 -9.1 15.1 6 6 A Q + 0 0 152 -3,-0.1 4,-0.0 4,-0.0 -3,-0.0 -0.244 61.1 153.2-146.2 52.3 45.2 -6.5 14.2 7 7 A A - 0 0 45 3,-0.2 4,-0.1 1,-0.1 -3,-0.0 -0.111 44.9-128.3 -73.8 179.4 46.9 -3.8 12.2 8 8 A R S S- 0 0 210 0, 0.0 -1,-0.1 0, 0.0 3,-0.0 0.862 93.3 -6.2 -97.5 -49.9 45.1 -1.6 9.6 9 9 A K S S- 0 0 185 2,-0.0 -2,-0.1 0, 0.0 3,-0.1 0.758 123.5 -56.2-112.7 -52.3 47.3 -1.9 6.5 10 10 A R S S- 0 0 144 5,-0.1 2,-0.3 1,-0.1 -3,-0.2 0.176 94.2 -31.7-156.8 -70.1 50.4 -3.8 7.6 11 11 A K - 0 0 69 4,-0.2 -1,-0.1 -4,-0.1 -7,-0.0 -0.991 27.5-164.4-160.4 162.1 52.5 -2.5 10.5 12 12 A R + 0 0 135 -2,-0.3 4,-0.1 2,-0.1 -1,-0.1 0.180 69.2 94.8-138.1 16.3 53.5 0.8 12.2 13 13 A T S S- 0 0 134 1,-0.1 3,-0.1 2,-0.1 -2,-0.0 0.819 117.9 -6.2 -79.3 -28.7 56.4 -0.3 14.4 14 14 A S S S+ 0 0 58 1,-0.1 -1,-0.1 0, 0.0 -2,-0.1 0.023 127.7 71.0-154.0 31.6 58.9 0.8 11.7 15 15 A I - 0 0 7 32,-0.0 -4,-0.2 4,-0.0 -5,-0.1 -0.450 58.4-177.7-151.0 71.5 56.7 1.7 8.7 16 16 A E > - 0 0 127 1,-0.1 4,-1.8 -4,-0.1 3,-0.4 -0.324 42.9-111.2 -67.2 155.2 54.8 4.9 9.3 17 17 A N H > S+ 0 0 111 1,-0.3 4,-1.3 2,-0.2 -1,-0.1 0.807 122.8 52.6 -60.2 -24.1 52.5 5.9 6.4 18 18 A R H > S+ 0 0 212 2,-0.2 4,-1.1 1,-0.2 -1,-0.3 0.831 102.3 58.1 -80.4 -31.0 54.9 8.8 5.7 19 19 A V H > S+ 0 0 36 -3,-0.4 4,-2.0 2,-0.2 -2,-0.2 0.939 105.0 50.2 -63.9 -45.8 57.9 6.4 5.6 20 20 A R H X S+ 0 0 38 -4,-1.8 4,-1.4 1,-0.2 -1,-0.2 0.946 115.1 41.9 -59.6 -46.7 56.3 4.4 2.7 21 21 A W H X S+ 0 0 100 -4,-1.3 4,-1.6 1,-0.2 -1,-0.2 0.679 106.2 64.5 -79.1 -6.3 55.6 7.5 0.7 22 22 A S H X S+ 0 0 57 -4,-1.1 4,-1.5 2,-0.2 -1,-0.2 0.918 100.3 52.3 -75.8 -38.6 59.1 8.8 1.7 23 23 A L H X S+ 0 0 7 -4,-2.0 4,-1.7 1,-0.2 3,-0.3 0.939 103.8 59.8 -56.4 -46.2 60.4 5.8 -0.3 24 24 A E H >X S+ 0 0 49 -4,-1.4 4,-1.6 1,-0.3 3,-0.6 0.929 103.5 46.8 -50.5 -53.6 58.2 7.1 -3.2 25 25 A T H 3< S+ 0 0 85 -4,-1.6 -1,-0.3 1,-0.2 -2,-0.2 0.843 111.6 53.9 -62.2 -28.5 60.0 10.4 -3.4 26 26 A M H 3< S+ 0 0 75 -4,-1.5 3,-0.5 -3,-0.3 4,-0.3 0.794 111.4 44.2 -76.1 -25.4 63.3 8.5 -3.2 27 27 A F H << S+ 0 0 10 -4,-1.7 3,-0.2 -3,-0.6 -2,-0.2 0.655 103.3 65.6 -91.3 -16.6 62.3 6.3 -6.2 28 28 A L S < S+ 0 0 91 -4,-1.6 -1,-0.2 -5,-0.2 -2,-0.1 0.154 86.2 73.9 -91.8 23.1 60.9 9.2 -8.3 29 29 A K S S+ 0 0 110 -3,-0.5 -1,-0.2 1,-0.4 -2,-0.1 0.815 111.2 6.2 -99.0 -41.3 64.4 10.8 -8.7 30 30 A C - 0 0 64 -4,-0.3 -1,-0.4 -3,-0.2 0, 0.0 -0.993 60.6-138.1-141.2 145.9 65.8 8.4 -11.2 31 31 A P S S+ 0 0 132 0, 0.0 -3,-0.1 0, 0.0 -4,-0.0 0.300 94.2 73.0 -84.5 7.9 64.2 5.5 -13.1 32 32 A K + 0 0 160 2,-0.0 2,-0.4 -5,-0.0 -5,-0.0 -0.453 60.3 169.7-122.6 64.1 67.3 3.4 -12.4 33 33 A P - 0 0 49 0, 0.0 2,-0.2 0, 0.0 -6,-0.0 -0.586 28.6-136.7 -75.4 125.7 67.3 2.4 -8.7 34 34 A S > - 0 0 66 -2,-0.4 4,-1.5 1,-0.1 3,-0.3 -0.504 17.7-119.7 -80.7 153.2 70.0 -0.2 -8.1 35 35 A L H > S+ 0 0 143 1,-0.2 4,-1.3 2,-0.2 -1,-0.1 0.812 119.9 60.3 -61.8 -22.0 69.3 -3.3 -5.9 36 36 A Q H > S+ 0 0 143 1,-0.2 4,-1.8 2,-0.2 3,-0.4 0.934 102.2 49.6 -69.7 -40.9 72.2 -1.8 -3.8 37 37 A Q H > S+ 0 0 77 -3,-0.3 4,-1.2 1,-0.2 -2,-0.2 0.815 104.6 59.8 -66.1 -25.4 70.0 1.3 -3.4 38 38 A I H X S+ 0 0 40 -4,-1.5 4,-2.0 2,-0.2 -1,-0.2 0.859 101.4 53.7 -71.0 -30.6 67.3 -1.1 -2.4 39 39 A T H X S+ 0 0 61 -4,-1.3 4,-2.1 -3,-0.4 5,-0.3 0.955 109.9 45.8 -66.9 -45.3 69.6 -2.2 0.5 40 40 A H H X S+ 0 0 112 -4,-1.8 4,-0.8 1,-0.2 -1,-0.2 0.767 107.2 61.0 -67.6 -21.1 69.9 1.4 1.6 41 41 A I H X S+ 0 0 8 -4,-1.2 4,-1.4 -5,-0.2 6,-0.3 0.936 104.2 48.0 -70.7 -43.3 66.1 1.6 1.2 42 42 A A H >X>S+ 0 0 12 -4,-2.0 4,-1.1 1,-0.3 3,-1.0 0.975 114.3 43.9 -61.9 -52.3 65.7 -1.1 3.8 43 43 A N H 3<5S+ 0 0 124 -4,-2.1 -1,-0.3 1,-0.2 -2,-0.2 0.758 108.3 64.3 -63.5 -19.3 68.1 0.6 6.2 44 44 A Q H 3<5S+ 0 0 105 -4,-0.8 -1,-0.2 -5,-0.3 -2,-0.2 0.841 124.1 11.9 -74.5 -31.1 66.2 3.8 5.2 45 45 A L H <<5S- 0 0 11 -4,-1.4 -2,-0.2 -3,-1.0 -1,-0.2 0.126 96.5-122.5-133.4 24.5 62.9 2.6 6.7 46 46 A G T <5 + 0 0 55 -4,-1.1 -3,-0.2 -5,-0.1 2,-0.1 0.768 67.9 134.8 41.4 32.5 64.0 -0.5 8.8 47 47 A L < - 0 0 18 -5,-0.8 2,-0.3 -6,-0.3 -1,-0.1 -0.461 62.1 -93.9-100.3 179.1 61.6 -2.7 6.8 48 48 A E >> - 0 0 154 -2,-0.1 4,-1.7 1,-0.1 3,-1.0 -0.687 30.2-120.3 -91.4 144.3 62.1 -6.2 5.3 49 49 A K H 3> S+ 0 0 138 -2,-0.3 4,-1.4 1,-0.3 5,-0.2 0.769 112.6 64.1 -55.1 -22.3 63.1 -6.4 1.6 50 50 A D H 3> S+ 0 0 102 2,-0.2 4,-1.7 1,-0.2 -1,-0.3 0.905 105.7 40.2 -71.7 -39.4 59.9 -8.4 1.1 51 51 A V H <> S+ 0 0 6 -3,-1.0 4,-1.3 1,-0.2 -2,-0.2 0.771 114.6 54.3 -80.3 -23.0 57.6 -5.5 2.0 52 52 A V H X S+ 0 0 1 -4,-1.7 4,-1.4 2,-0.2 -2,-0.2 0.800 109.3 47.9 -79.3 -27.1 59.8 -3.0 0.1 53 53 A R H X S+ 0 0 159 -4,-1.4 4,-1.2 -5,-0.2 -2,-0.2 0.938 114.6 43.4 -78.4 -46.9 59.6 -5.1 -3.1 54 54 A V H X S+ 0 0 79 -4,-1.7 4,-1.1 1,-0.2 -2,-0.2 0.861 114.7 52.6 -66.4 -31.4 55.8 -5.5 -3.0 55 55 A W H X S+ 0 0 6 -4,-1.3 4,-1.3 1,-0.2 -1,-0.2 0.884 111.9 44.2 -72.7 -35.1 55.5 -1.8 -2.0 56 56 A F H X S+ 0 0 33 -4,-1.4 4,-1.2 2,-0.2 -1,-0.2 0.648 100.0 72.7 -83.6 -10.2 57.7 -0.8 -5.0 57 57 A C H X S+ 0 0 47 -4,-1.2 4,-1.5 2,-0.2 3,-0.2 0.951 104.0 39.2 -66.9 -43.7 55.7 -3.3 -7.3 58 58 A N H < S+ 0 0 54 -4,-1.1 -2,-0.2 1,-0.2 -1,-0.2 0.925 112.5 56.1 -70.8 -40.8 52.8 -0.9 -7.1 59 59 A R H < S+ 0 0 48 -4,-1.3 3,-0.5 1,-0.2 -1,-0.2 0.765 107.8 52.2 -61.5 -20.8 55.2 2.2 -7.4 60 60 A R H < S+ 0 0 159 -4,-1.2 3,-0.3 -3,-0.2 -1,-0.2 0.856 117.9 33.8 -83.8 -36.9 56.4 0.5 -10.6 61 61 A Q S < S+ 0 0 131 -4,-1.5 -1,-0.2 -3,-0.2 -2,-0.1 -0.408 73.9 126.6-115.8 58.5 53.0 0.1 -12.2 62 62 A K S S- 0 0 119 -3,-0.5 -1,-0.2 -2,-0.2 -3,-0.1 0.833 100.4 -40.8 -81.6 -31.7 51.1 3.2 -11.0 63 63 A G S S+ 0 0 60 -3,-0.3 3,-0.3 -4,-0.1 -2,-0.1 0.198 99.3 118.6 172.5 41.4 50.1 4.2 -14.5 64 64 A K S S+ 0 0 171 1,-0.2 2,-0.2 -4,-0.2 -3,-0.1 0.775 90.2 25.8 -90.8 -28.5 53.0 3.6 -17.0 65 65 A R S S+ 0 0 217 2,-0.0 2,-0.4 0, 0.0 -1,-0.2 -0.606 77.3 166.1-134.9 75.7 51.2 1.1 -19.2 66 66 A S 0 0 112 -3,-0.3 -3,-0.0 -2,-0.2 -4,-0.0 -0.768 360.0 360.0 -94.0 133.4 47.4 1.7 -18.9 67 67 A S 0 0 194 -2,-0.4 -2,-0.0 0, 0.0 0, 0.0 -0.993 360.0 360.0-132.3 360.0 45.2 -0.0 -21.5