==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CHAPERONE 20-DEC-06 2OCH . COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN DNJ-12; . SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; . AUTHOR J.OSIPIUK,N.MALTSEVA,M.GU,C.VOISINE,R.I.MORIMOTO,A.JOACHIMIA . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5177.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 69.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 35 53.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A K 0 0 189 0, 0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 88.7 -2.9 -11.6 29.1 2 4 A E + 0 0 202 2,-0.0 2,-0.6 0, 0.0 0, 0.0 0.000 360.0 118.2 -78.7 29.4 -5.5 -8.9 28.2 3 5 A T - 0 0 86 -2,-0.6 5,-0.0 2,-0.0 0, 0.0 -0.883 68.5-121.8 -88.1 126.5 -5.2 -6.7 31.3 4 6 A G > - 0 0 25 -2,-0.6 4,-2.4 1,-0.1 5,-0.2 -0.260 15.9-117.9 -63.1 151.4 -4.1 -3.3 30.0 5 7 A Y H > S+ 0 0 52 2,-0.2 4,-1.6 1,-0.2 6,-0.1 0.845 113.4 51.5 -65.2 -35.5 -0.8 -1.8 31.3 6 8 A Y H >>S+ 0 0 16 1,-0.2 5,-2.3 2,-0.2 4,-0.7 0.963 112.5 47.1 -62.5 -49.8 -2.4 1.2 32.9 7 9 A D H >45S+ 0 0 120 1,-0.2 3,-0.9 3,-0.2 -2,-0.2 0.867 105.5 59.2 -55.2 -44.2 -4.9 -1.1 34.7 8 10 A V H 3<5S+ 0 0 18 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.882 112.8 39.5 -54.8 -40.2 -2.1 -3.4 35.8 9 11 A L H 3<5S- 0 0 3 -4,-1.6 -1,-0.3 -3,-0.4 -2,-0.2 0.484 113.3-120.1 -87.0 -5.6 -0.5 -0.4 37.6 10 12 A G T <<5S+ 0 0 61 -3,-0.9 2,-0.3 -4,-0.7 -3,-0.2 0.817 70.7 125.6 69.9 33.2 -3.8 0.9 38.8 11 13 A V < - 0 0 23 -5,-2.3 -1,-0.2 -6,-0.1 -2,-0.1 -0.782 63.4-107.1-118.9 159.3 -3.4 4.3 37.0 12 14 A K > - 0 0 145 -2,-0.3 3,-2.0 -3,-0.1 -1,-0.0 -0.536 37.1-108.8 -76.7 150.8 -5.4 6.3 34.5 13 15 A P T 3 S+ 0 0 86 0, 0.0 -1,-0.1 0, 0.0 50,-0.0 0.691 119.0 60.4 -55.9 -19.2 -4.2 6.5 30.9 14 16 A D T 3 S+ 0 0 106 2,-0.0 -2,-0.0 0, 0.0 0, 0.0 0.223 77.7 149.0 -88.6 15.0 -3.2 10.2 31.4 15 17 A A < - 0 0 2 -3,-2.0 2,-0.1 4,-0.1 -4,-0.0 -0.154 41.0-136.1 -56.8 136.0 -0.7 9.2 34.2 16 18 A S > - 0 0 51 1,-0.1 4,-2.4 0, 0.0 5,-0.2 -0.411 29.2-100.1 -79.4 171.6 2.3 11.5 34.5 17 19 A D H > S+ 0 0 72 1,-0.2 4,-2.3 2,-0.2 5,-0.2 0.896 126.4 52.2 -55.3 -45.7 5.8 10.1 35.0 18 20 A N H > S+ 0 0 121 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.915 109.3 48.8 -56.4 -47.1 5.5 10.9 38.8 19 21 A E H > S+ 0 0 101 1,-0.2 4,-2.4 2,-0.2 -2,-0.2 0.906 111.2 49.4 -65.4 -37.1 2.2 9.0 39.0 20 22 A L H X S+ 0 0 1 -4,-2.4 4,-2.5 2,-0.2 -1,-0.2 0.893 111.2 50.5 -62.1 -43.6 3.7 5.9 37.1 21 23 A K H X S+ 0 0 99 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.925 112.7 45.1 -62.5 -46.1 6.7 5.9 39.5 22 24 A K H X S+ 0 0 114 -4,-2.4 4,-2.6 2,-0.2 -2,-0.2 0.911 113.9 49.8 -63.1 -44.9 4.4 6.1 42.6 23 25 A A H X S+ 0 0 12 -4,-2.4 4,-2.5 2,-0.2 5,-0.2 0.899 110.7 49.8 -63.5 -42.1 2.1 3.3 41.2 24 26 A Y H X S+ 0 0 61 -4,-2.5 4,-3.2 2,-0.2 5,-0.2 0.932 111.6 47.6 -64.3 -48.7 5.1 1.1 40.4 25 27 A R H X S+ 0 0 144 -4,-2.4 4,-2.1 1,-0.2 -2,-0.2 0.934 112.1 50.9 -58.7 -43.7 6.6 1.5 43.9 26 28 A K H X S+ 0 0 119 -4,-2.6 4,-1.7 2,-0.2 -2,-0.2 0.890 114.7 42.1 -60.5 -44.9 3.1 0.8 45.5 27 29 A M H X S+ 0 0 35 -4,-2.5 4,-2.4 2,-0.2 -2,-0.2 0.956 111.0 55.4 -64.0 -50.2 2.6 -2.4 43.4 28 30 A A H < S+ 0 0 34 -4,-3.2 -2,-0.2 1,-0.3 -1,-0.2 0.872 113.7 43.2 -52.3 -38.9 6.2 -3.6 43.9 29 31 A L H >< S+ 0 0 101 -4,-2.1 3,-2.7 -5,-0.2 -1,-0.3 0.814 103.6 60.4 -79.2 -33.8 5.7 -3.3 47.6 30 32 A K H 3< S+ 0 0 112 -4,-1.7 -2,-0.2 1,-0.3 -1,-0.2 0.861 103.6 59.2 -59.4 -33.8 2.2 -4.9 47.8 31 33 A F T 3< S+ 0 0 32 -4,-2.4 -1,-0.3 -5,-0.1 -2,-0.2 0.162 70.8 141.3 -83.5 20.5 4.2 -7.7 46.3 32 34 A H X> - 0 0 87 -3,-2.7 4,-2.9 1,-0.2 3,-2.5 -0.502 64.1-125.2 -46.3 120.5 6.4 -7.7 49.4 33 35 A P T 34 S+ 0 0 96 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.460 109.9 65.1 -55.6 -1.6 6.8 -11.6 49.6 34 36 A D T 34 S+ 0 0 136 2,-0.2 -3,-0.1 3,-0.1 -2,-0.1 0.563 113.4 29.5-100.5 -18.4 5.5 -11.2 53.2 35 37 A K T <4 S+ 0 0 127 -3,-2.5 -4,-0.1 -6,-0.2 -5,-0.1 0.712 139.2 23.8 -98.7 -42.6 2.1 -10.0 52.0 36 38 A N >< + 0 0 68 -4,-2.9 3,-1.4 1,-0.1 -2,-0.2 -0.738 63.7 170.8-129.5 79.4 2.2 -12.0 48.7 37 39 A P T 3 S+ 0 0 92 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.891 84.4 41.1 -55.0 -42.4 4.5 -15.1 48.8 38 40 A D T 3 S+ 0 0 160 1,-0.2 3,-0.4 2,-0.1 4,-0.2 0.049 83.0 111.0 -97.9 27.0 3.4 -16.5 45.5 39 41 A G <> + 0 0 12 -3,-1.4 4,-2.6 1,-0.2 5,-0.2 0.225 34.4 112.6 -89.6 15.0 3.2 -13.1 43.6 40 42 A A H > S+ 0 0 81 -3,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.921 79.1 44.4 -56.2 -55.4 6.2 -13.6 41.2 41 43 A E H > S+ 0 0 127 -3,-0.4 4,-1.7 1,-0.2 -1,-0.2 0.879 113.0 51.4 -55.4 -45.5 4.2 -13.7 37.9 42 44 A Q H > S+ 0 0 97 1,-0.2 4,-2.0 -4,-0.2 -1,-0.2 0.927 108.2 51.8 -62.5 -40.8 2.0 -10.8 38.9 43 45 A F H X S+ 0 0 49 -4,-2.6 4,-2.6 1,-0.2 -1,-0.2 0.844 105.2 56.3 -70.7 -24.2 5.1 -8.7 39.7 44 46 A K H X S+ 0 0 116 -4,-1.7 4,-2.7 -5,-0.2 -1,-0.2 0.908 107.8 47.9 -67.2 -39.1 6.6 -9.6 36.2 45 47 A Q H X S+ 0 0 43 -4,-1.7 4,-2.5 2,-0.2 -2,-0.2 0.874 113.5 48.3 -63.5 -39.2 3.4 -8.1 34.5 46 48 A I H X S+ 0 0 1 -4,-2.0 4,-2.1 2,-0.2 -2,-0.2 0.908 111.7 49.6 -67.9 -41.5 3.7 -5.1 36.8 47 49 A S H X S+ 0 0 39 -4,-2.6 4,-2.4 1,-0.2 -2,-0.2 0.915 112.4 47.8 -64.1 -43.3 7.4 -4.8 35.9 48 50 A Q H X S+ 0 0 67 -4,-2.7 4,-2.4 1,-0.2 -2,-0.2 0.905 109.7 51.8 -66.8 -41.4 6.6 -5.1 32.2 49 51 A A H X S+ 0 0 0 -4,-2.5 4,-2.8 1,-0.2 5,-0.2 0.890 112.4 46.1 -59.3 -45.2 3.8 -2.5 32.3 50 52 A Y H X S+ 0 0 49 -4,-2.1 4,-2.5 2,-0.2 -1,-0.2 0.910 109.2 55.0 -66.6 -43.7 6.1 0.0 34.0 51 53 A E H < S+ 0 0 97 -4,-2.4 4,-0.4 -5,-0.2 -2,-0.2 0.911 115.2 40.0 -57.7 -43.9 8.9 -0.7 31.5 52 54 A V H >< S+ 0 0 19 -4,-2.4 3,-1.1 2,-0.1 7,-0.4 0.971 119.3 42.8 -62.2 -56.1 6.5 0.1 28.6 53 55 A L H 3< S+ 0 0 2 -4,-2.8 -2,-0.2 1,-0.3 -3,-0.2 0.768 109.6 56.1 -70.8 -27.8 4.6 3.1 30.1 54 56 A S T 3< S+ 0 0 42 -4,-2.5 2,-0.6 -5,-0.2 -1,-0.3 0.628 93.1 79.8 -81.9 -11.9 7.7 4.8 31.6 55 57 A D S <> S- 0 0 65 -3,-1.1 4,-3.0 -4,-0.4 5,-0.2 -0.854 74.1-149.2 -96.9 121.8 9.4 4.9 28.1 56 58 A E H > S+ 0 0 146 -2,-0.6 4,-2.2 1,-0.2 -1,-0.2 0.881 95.2 46.8 -60.5 -40.2 8.1 7.8 26.1 57 59 A K H > S+ 0 0 163 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.937 116.3 43.2 -69.2 -44.6 8.6 6.0 22.7 58 60 A K H > S+ 0 0 91 2,-0.2 4,-2.7 1,-0.2 -2,-0.2 0.891 113.3 52.6 -68.8 -35.7 7.0 2.7 23.9 59 61 A R H X S+ 0 0 41 -4,-3.0 4,-2.9 -7,-0.4 5,-0.2 0.924 106.7 52.6 -69.0 -38.2 4.2 4.5 25.6 60 62 A Q H X S+ 0 0 113 -4,-2.2 4,-2.7 -5,-0.2 -1,-0.2 0.920 111.2 47.4 -59.6 -41.6 3.4 6.5 22.4 61 63 A I H X S+ 0 0 127 -4,-1.9 4,-2.7 2,-0.2 -2,-0.2 0.946 112.2 49.9 -63.3 -47.3 3.2 3.2 20.5 62 64 A Y H < S+ 0 0 74 -4,-2.7 4,-0.4 1,-0.2 -2,-0.2 0.929 113.6 44.7 -56.5 -47.4 1.0 1.7 23.2 63 65 A D H >< S+ 0 0 72 -4,-2.9 3,-1.6 1,-0.2 -1,-0.2 0.908 111.0 53.5 -67.4 -38.1 -1.3 4.7 23.2 64 66 A Q H 3< S+ 0 0 157 -4,-2.7 -1,-0.2 1,-0.3 -2,-0.2 0.919 100.4 62.8 -61.4 -42.9 -1.4 4.7 19.3 65 67 A G T 3< 0 0 75 -4,-2.7 -1,-0.3 -5,-0.2 -2,-0.2 0.637 360.0 360.0 -53.6 -16.5 -2.4 1.1 19.6 66 68 A G < 0 0 103 -3,-1.6 -3,-0.1 -4,-0.4 -2,-0.0 0.298 360.0 360.0-106.8 360.0 -5.6 2.2 21.3